Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0318
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   2.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   3.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   3.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.7  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   6.7  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    21   6.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.9  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 541 EAGAPPGVVNIIHGTHGAVNFICDSRRSRPY 633
           + GAPP  +N+  GT+G    + D   +  Y
Sbjct: 249 DEGAPPSKINLGLGTYGRGFALADPTNTSLY 279


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +2

Query: 98  IDFRFGCSQEGL*DMEQKYCFDSSTANVQICSATE 202
           ID +  C++  + + E +YC  +   N+ + +  E
Sbjct: 484 IDAKMFCNESSVSNCENEYCECTHVVNIPLGTVVE 518


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +1

Query: 313 HHIAS-ARRQHPKHRQRH 363
           HH+    + QHP+H Q H
Sbjct: 165 HHMGHHMQEQHPQHHQPH 182


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +1

Query: 313 HHIAS-ARRQHPKHRQRH 363
           HH+    + QHP+H Q H
Sbjct: 167 HHMGHHMQEQHPQHHQPH 184


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 443 TVGSSPGN*RLQHLQQLQVAPCSYACPC 360
           + GS PG  R   L  L++    ++C C
Sbjct: 685 STGSKPGKPRSAFLTDLKLMGGKWSCDC 712


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 604 ICDSRRSRPYPSSVATPP 657
           +C+S RS  YP+ V   P
Sbjct: 370 LCNSARSNKYPTRVPHRP 387


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 262 C*GRCASRNSVSGA 303
           C GRCAS   VSG+
Sbjct: 65  CIGRCASYIQVSGS 78


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 430 DDPTVDVPASAGNRKHV 480
           +DP ++VP +AG ++ V
Sbjct: 122 EDPDLEVPGNAGLKEQV 138


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 498 SEGLIIHVFPVTSAGGNIHS 439
           SEG I+  F ++ AGG ++S
Sbjct: 200 SEGNILEEFVLSRAGGLVNS 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,861
Number of Sequences: 336
Number of extensions: 3254
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)