Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0318
(658 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18188| Best HMM Match : SRP54 (HMM E-Value=0) 62 3e-10
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 60 1e-09
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 56 3e-08
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 53 2e-07
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 50 2e-06
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 48 9e-06
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 44 1e-04
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 39 0.003
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 31 1.1
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_4444| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 28 5.8
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_27725| Best HMM Match : RVT_1 (HMM E-Value=1.9e-19) 28 7.7
SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 28 7.7
>SB_18188| Best HMM Match : SRP54 (HMM E-Value=0)
Length = 410
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = +2
Query: 278 LRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVGGV 409
LR + VEH CSITSLQ+G+++ ++ KDMDT+SY+VPLGV G+
Sbjct: 365 LRTEEVVEHTCSITSLQMGETMPSVTKDMDTYSYRVPLGVCAGI 408
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 QYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAY--KTWSKSTVLTRQQL 176
Q+ D+ I++ NPAT EVI RVP A Q E+ A+ AA++A+ WS+ + RQ+L
Sbjct: 51 QWCDAADGQTIQVLNPATAEVIARVPRAGQREIDRAVMAARQAFDDSPWSRIKPVERQKL 110
Query: 177 MFKFARLLRENQSKLAAKITEEQGKT 254
++ FA L+ +N + LA + + GK+
Sbjct: 111 LWNFADLIEKNAALLAEIESIDNGKS 136
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +2
Query: 359 DMDTHSY--KVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDP 508
D H Y + +GVVG + A+NFP+++ W PAL TG T ++KP+E P
Sbjct: 176 DAQFHGYTRREAVGVVGAIVAWNFPLLLACWKLGPALATGCTTVLKPAEDTP 227
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 517 LMMMELLQEAGAPPGVVNIIHG 582
L + EL EAG P GVVN++ G
Sbjct: 231 LKLAELALEAGYPAGVVNVVTG 252
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/87 (28%), Positives = 45/87 (51%)
Frame = +2
Query: 248 ENLADAEGDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFP 427
+ LA+ G+ R Q + + Q+G++ +++ ++ + + P+GVVG + +NFP
Sbjct: 95 KTLAEGVGETYRSGQFFHYYAAEVLRQMGETAESVRPGIEIETRREPVGVVGIITPWNFP 154
Query: 428 VMIPLWMFPPALVTGNTCIIKPSEQDP 508
W PAL GN + KP+ Q P
Sbjct: 155 TATGAWKIAPALAFGNAIVWKPANQVP 181
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +3
Query: 3 QYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMF 182
++V+ + ++ ++VIG +A + + +A+ AA + W KS + R ++
Sbjct: 13 EWVEGNKGSVANISPADISDVIGHYAQADKAQTEAAIAAAAAGQREWQKSGLEQRYSVLM 72
Query: 183 KFARLLRENQSKLAAKITEEQGKT 254
L + +L A + E+GKT
Sbjct: 73 AIGDELIARKDELGAILAREEGKT 96
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +2
Query: 260 DAEGDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIP 439
+A DV +E+ + G +Q + ++ + PLGVVGG+ A+N+P+
Sbjct: 369 EALWDVDNVADVLEYYAGVAPTLSGQHVQ-LPNGSFAYTRREPLGVVGGIGAWNYPIQTA 427
Query: 440 LWMFPPALVTGNTCIIKPSEQDP 508
W PA+ GNT + KPS P
Sbjct: 428 CWKIAPAIACGNTIVYKPSPLTP 450
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/71 (26%), Positives = 41/71 (57%)
Frame = +3
Query: 39 LTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSK 218
+T+P+T + V + + E+ A+ +A++A+KTWS + R +++ +RL+R+ +
Sbjct: 295 ITDPSTGHISCEVKGSGKTEVKRAVLSARKAFKTWSVLSGSERGRILGDASRLVRKRRED 354
Query: 219 LAAKITEEQGK 251
+A + GK
Sbjct: 355 IAKVEVHDNGK 365
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 523 MMELLQEAGAPPGVVNIIHG 582
+ ++L EAG PPGVVNII G
Sbjct: 456 LADILTEAGVPPGVVNIIQG 475
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 359 DMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPS 496
D + +K P+GVVGG+ +NFP+M+ W PAL GNT ++KP+
Sbjct: 759 DTEMQGWK-PVGVVGGIVPWNFPLMLLCWKVCPALAMGNTVVLKPA 803
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/72 (27%), Positives = 42/72 (58%)
Frame = +3
Query: 39 LTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSK 218
+ NP+ EVI +V + + ++ A++AA +A W K R Q+++ A L +++
Sbjct: 1167 ILNPS-GEVIAQVADGNRKDIREAVEAAHKAASGWGKRAAHNRAQIVYYLAENLEMRRAE 1225
Query: 219 LAAKITEEQGKT 254
+AA+I++ G++
Sbjct: 1226 VAARISDMTGQS 1237
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +3
Query: 60 EVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITE 239
EV+ + ++ A+ AA+ A+++WSK R + ++ AR ++++ +A +
Sbjct: 668 EVLASTTQGETQDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESM 727
Query: 240 EQGKT 254
+ GK+
Sbjct: 728 DNGKS 732
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 386 PLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDP 508
P+GV+G ++ + + PA++ GNT +I PSE+ P
Sbjct: 1291 PVGVIGIACPDECSLLAFVSLLAPAIIRGNTVVIVPSEKYP 1331
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 511 ATLMMMELLQEAGAPPGVVNIIHG 582
+ L+ E+ EAG PPGV N++ G
Sbjct: 809 SALLFAEICAEAGLPPGVFNVVTG 832
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +3
Query: 45 NPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLA 224
NPAT E +G+V E A+ A +A++TW K+T R + + K+ +L+ ++Q++LA
Sbjct: 82 NPATGEELGQVANMGAKEGELAVQEAYKAFQTWKKTTAKERSEKLRKWFQLILQHQNELA 141
Query: 225 AKITEEQ 245
+T EQ
Sbjct: 142 ELLTTEQ 148
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 517 LMMMELLQEAGAPPGVVNIIHGTHGAVNFICDS 615
L + +L +EAG P GV+N I + VN + D+
Sbjct: 183 LALQQLAEEAGFPAGVINTIPCSRDRVNEVTDT 215
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 416 FNFPVMIPLWMFPPALVTGNTCIIKPSEQDP 508
+NFP+ + AL G T IIKPSE+ P
Sbjct: 149 WNFPLGMITRKAAAALAAGCTVIIKPSEETP 179
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/75 (30%), Positives = 44/75 (58%)
Frame = +3
Query: 30 WIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLREN 209
+I+ +P+ EV +VP++ ++ + A+ AA A+K+WS S+ R + + K A L+ +
Sbjct: 25 YIDSYDPSRGEVYCKVPDSGKEHVDLAVAAANAAFKSWSVSSPAYRAERLRKLADLIEDR 84
Query: 210 QSKLAAKITEEQGKT 254
+ A + +QGKT
Sbjct: 85 LEEFAQAESRDQGKT 99
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +1
Query: 520 MMMELLQEAGAPPGVVNIIHGT 585
MM EL+ +AG PPGV+NI+ GT
Sbjct: 191 MMAELINDAGFPPGVINIVFGT 212
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 371 HSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSE 499
+S + P GV G ++ +N P+ + + PA+ +G T + KPSE
Sbjct: 141 YSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSE 183
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 386 PLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDP 508
P+G+VG + +NFP+ + PAL GN I+KP+EQ P
Sbjct: 467 PVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAEQTP 507
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +3
Query: 3 QYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYK---TWSKSTVLTRQQ 173
++VD + NP T E I + E ++++ A+ AAK A+K W R +
Sbjct: 337 EFVDCTSGKVFPTINPTTGEKICDISEGDKEDVDKAVKAAKEAFKLGSAWRTMDASMRGK 396
Query: 174 LMFKFARLLRENQSKLAAKITEEQGK 251
L++K A+L+ + + LA+ T + GK
Sbjct: 397 LLYKLAQLIDRDIAYLASLETIDSGK 422
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 368 THSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDP 508
T++ P+GVVG + +NFP+++ PAL G I+KP+EQ P
Sbjct: 1331 TYTRHEPVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKPAEQTP 1377
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +2
Query: 254 LADAEGDVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVM 433
L +A G+VL +E GD I + K P+GV + +NFP+
Sbjct: 37 LLEARGEVLYAANYIEFFSEEAKRVYGDIIPSNNPGQKVLITKEPVGVCASITPWNFPIA 96
Query: 434 IPLWMFPPALVTGNTCIIKPSEQDP 508
+ + A+ G T I +PS Q P
Sbjct: 97 MLVRKASSAIACGCTMIARPSGQTP 121
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 350 IAKDMDTHSYK-VPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSE 499
I MDT K PLGV ++A+N+PV + A+ GN ++KPSE
Sbjct: 59 IVNKMDTCYIKNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSE 109
>SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 386 PLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCI 484
P+G VG + AFNFPV + W ++ GN I
Sbjct: 148 PVGTVGVITAFNFPVAVFGWNTAISMTCGNVNI 180
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 45 NPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKST 155
+PAT + +G+V + A++AA + ++TW K+T
Sbjct: 115 SPATGDELGQVSNMGAQQWELAVNAAYKEFQTWKKTT 151
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 3 QYVDSKTTNWIELTNPATNEVIGRVPEATQDELTSALDAAK 125
++VDS NP V+ +V AT +++ A+DAAK
Sbjct: 716 EFVDSHHGKTFNTINPTDGTVLAQVSLATHEDVDDAVDAAK 756
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 517 LMMMELLQEAGAPPGVVNIIHGTHGAV-NFICDSRRSRPYPSSVATP 654
L EL AG P GV+NI+ G+ V N IC+ R + +TP
Sbjct: 763 LKFAELAARAGFPKGVINILPGSGSVVGNRICEHPDVRKLGFTGSTP 809
>SB_4444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 268 GRCASRNSVSGALL*HHIASARRQHPKHRQRHGHA*LQGATWSCW---RCCSLQFP 426
GRC+SR+ S A H AS+R H + LQG W +C SL P
Sbjct: 289 GRCSSRDLSSSASSQEHFASSRVSQQSSELHHLLSSLQGVHWRTGEIPKCASLVPP 344
>SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1014
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +3
Query: 75 VPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQG 248
+P T+ D K T+L LMF ++ +R N ++ K+T+ G
Sbjct: 791 IPFDTERHYHPEFDGYHPGIKVKQADTILIGYPLMFNMSKQIRRNDLEMYEKVTDRNG 848
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 523 MMELLQEAGAPPGVVNII 576
+ME+ QEAG P GV+N +
Sbjct: 222 VMEMFQEAGLPDGVINFV 239
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 559 GVVNIIHGTHGAVNFICDSRRSRPY 633
GV N+ H T+G+ +C++ PY
Sbjct: 2844 GVANVCHNTYGSYECMCETEMYGPY 2868
>SB_27725| Best HMM Match : RVT_1 (HMM E-Value=1.9e-19)
Length = 262
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 78 PEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFA 191
P++ + T A R+YK W S + TR+Q++ + A
Sbjct: 22 PDSGNNMSTVARAVRTRSYKCWCLSHIFTRKQVLIRTA 59
>SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 585 CPVNDINNARRSPGFLKELHHHERGSGSC 499
CP+N+ A +P F K +H H+ SC
Sbjct: 95 CPINNYFPAVSNPCFWKWIHAHQTAQESC 123
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +1
Query: 520 MMMELLQEAGAPPGVVNIIHG 582
++ ++L+++G P GVVNI++G
Sbjct: 196 LLAKVLKDSGIPKGVVNIVYG 216
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,377,265
Number of Sequences: 59808
Number of extensions: 414288
Number of successful extensions: 1150
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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