Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0318
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    26   0.36 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.6  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   7.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 436 PTVDVPASAGNRKHVYNQAF 495
           P VD P S GN  ++YN  F
Sbjct: 310 PMVDNPESTGNLVYIYNNPF 329


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +2

Query: 395 VVGGVAAFNFPVMIPLWMFPP 457
           VV       +P ++P W  PP
Sbjct: 471 VVAAALTGTYPTLLPQWCLPP 491


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 454 REHPQWDHHR 425
           REHP WD  R
Sbjct: 171 REHPFWDDQR 180


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = -3

Query: 362 CLWRCFGC 339
           C W CF C
Sbjct: 605 CCWHCFNC 612


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,885
Number of Sequences: 438
Number of extensions: 3819
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)