Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0317
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 320 MNVPSRSFKVATSFTLPFSLASSVLRPWSYI 228
           +NVPS    V+TS  +     +SV+  W +I
Sbjct: 436 INVPSLIIHVSTSAYVATVWINSVINRWKFI 466


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 270 FQLSFVSSATLVLYCSSVRSLVSRFCL 190
           + LS +S   L+ +C+ V  L  +FC+
Sbjct: 171 YTLSKMSQVMLIQFCAFVVVLKQKFCV 197



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 516 LWSTFHRTDLVETACRISLADLGLEFFDLFLIH 614
           +W ++ RT +  T     +  L + FF  F++H
Sbjct: 123 IWKSYKRTQIFITCELFFVILLWISFFLNFMLH 155


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 264 LSFVSSATLVLYCSSVRSLVSRFCLPLSKRR 172
           L F+ + TL++ C  VRS  S+      K R
Sbjct: 245 LIFLFNCTLIIMCDCVRSEASKVVKNAQKLR 275


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 250 FCDPGLILFICEVSRVSFLF 191
           FC   L++F C+   V FLF
Sbjct: 68  FCT-ALVIFYCQEGSVDFLF 86


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 250 FCDPGLILFICEVSRVSFLF 191
           FC   L++F C+   V FLF
Sbjct: 301 FCT-ALVIFYCQEGSVDFLF 319


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 250 FCDPGLILFICEVSRVSFLF 191
           FC   L++F C+   V FLF
Sbjct: 301 FCT-ALVIFYCQEGSVDFLF 319


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 597 RKTPSPGLPVKSCRPSPPDQ 538
           RK   PG+P+ S   S PD+
Sbjct: 828 RKMEPPGVPLNSTPRSTPDK 847



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 603  RGRKTPSPGLPVKSCRPSPPDQCDGMYST 517
            +G  + S G+P+K     PP    G  ST
Sbjct: 1095 QGSSSSSEGVPLKGTAVPPPSGSSGPGST 1123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,019
Number of Sequences: 336
Number of extensions: 3117
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)