Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0317
(640 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 58 6e-09
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 58 6e-09
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 57 1e-08
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 52 3e-07
04_01_0350 - 4610444-4610668,4612181-4612969 51 7e-07
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 50 1e-06
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 50 1e-06
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 46 3e-05
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 44 1e-04
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 43 2e-04
10_01_0065 + 845447-846187,846969-847193 42 4e-04
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 42 5e-04
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 40 0.001
10_01_0066 + 848523-849269,849520-849741 40 0.002
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 38 0.005
11_01_0198 - 1556215-1556298,1556412-1556580,1556666-1556921,155... 30 1.3
03_05_0500 + 24942047-24942541 29 2.4
10_08_1039 - 22488405-22489088,22490827-22490927,22491038-22491224 29 3.1
09_04_0493 - 18046553-18046990,18047061-18047180,18047290-180474... 29 4.1
05_07_0084 - 27587307-27589175 29 4.1
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 4.1
01_06_1312 - 36205549-36206649,36207558-36207883,36209083-362091... 29 4.1
08_02_0536 - 18302394-18302826,18302903-18303183,18303480-183037... 28 5.4
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 28 5.4
01_06_1154 - 34955235-34955827,34955912-34956045,34956142-349563... 28 5.4
11_05_0026 - 18462749-18462841,18463642-18463726,18463989-184640... 28 7.2
12_02_0351 - 17829874-17830005,17830250-17830267,17830544-178306... 27 9.5
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 27 9.5
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = +1
Query: 301 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 480
L G +P + LGT P + V A+ GYR ID A Y NEK IG A+K D+G
Sbjct: 7 LNTGAKIPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALKKVFDEG 66
Query: 481 TVRRDELFI 507
V+R+++FI
Sbjct: 67 IVKREDIFI 75
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
KLW T H + V A +L DL ++ DL+LIH P+ ++
Sbjct: 78 KLWCTNHAPEDVPVALDSTLQDLQTDYVDLYLIHWPVRMK 117
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNE-KLIGKAIKNKIDD 477
L G +P + LGT + ++V A+ GYR ID A +Y NE ++IG A+K DD
Sbjct: 7 LNTGARIPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEVIGGALKKLFDD 66
Query: 478 GTVRRDELFI 507
G V+R++LFI
Sbjct: 67 GVVKREDLFI 76
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
K+W + + V A +L DL L++ DL+LIH P ++
Sbjct: 79 KIWCSDLAPEDVPLAMDSTLKDLQLDYVDLYLIHWPFQIK 118
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 301 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 480
L G +P + LGT P + + V A+ GYR ID A +Y NE +G A+K ++G
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGDAVYAAVKAGYRHIDCARMYKNENEVGIALKKLFEEG 66
Query: 481 TVRRDELFI--RVNCGVHS 531
V+R++LFI ++ C H+
Sbjct: 67 VVKREDLFITSKLWCDCHA 85
Score = 34.7 bits (76), Expect = 0.063
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
KLW H + V + +L+DL LE+ DL+LIH P ++
Sbjct: 78 KLWCDCHAPEDVPESLDKTLSDLQLEYLDLYLIHWPFRVK 117
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Frame = +1
Query: 301 LRDGTFMPVIALGTALLP------PRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 462
LR G MP++ +GTA P P + V AID GYR DTA YG E +G+A+
Sbjct: 21 LRSGKPMPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGTEAPLGEAVL 80
Query: 463 NKIDDGTV-RRDELFI 507
+ G V RD+L+I
Sbjct: 81 EAVRAGMVASRDDLYI 96
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
KLW + V A R +L +L + + DL+LIH P+ L+
Sbjct: 99 KLWISDTHPGRVLPALRRTLRNLQMVYIDLYLIHWPIRLR 138
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +1
Query: 286 VATLKLRDGTFMPVIALGT-ALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 462
V + L G MPV+ GT + PP + A+ +GYR +DTA +YG E +G A+
Sbjct: 20 VPCVTLNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAVGAAVA 79
Query: 463 NKIDDGTV-RRDELFI 507
+ G V R ELF+
Sbjct: 80 EAVRCGAVASRGELFV 95
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 546 VETACRISLADLGLEFFDLFLIHNPMSL 629
V A R SL+ LGL++ DLFLIH P+++
Sbjct: 109 VVAALRESLSRLGLDYVDLFLIHWPVAI 136
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = +1
Query: 301 LRDGTFMPVIALGTALLP-----PRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 465
L G MP + +GTA P P ++V AI+ GYR DTA +Y E ++G A+
Sbjct: 6 LSSGKPMPRVGMGTASFPLGATDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILGDAVAE 65
Query: 466 KIDDGTV-RRDELFI 507
+ G V RDEL+I
Sbjct: 66 AVRAGLVASRDELYI 80
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
KLW V + R +L + +E+ DL+LIH P+S++
Sbjct: 83 KLWVAHAHPGHVLPSLRRALRKMQMEYLDLYLIHFPVSMR 122
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +1
Query: 289 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 468
A L L G MP + LG + +++ +A+ +GYR D A Y NE +G A+
Sbjct: 11 AALALSSGHTMPSVGLGVWRMDSPAIRDLIHSALRIGYRHFDCAADYQNEAEVGDALAEA 70
Query: 469 IDDGTVRRDELFI 507
G V+R++LFI
Sbjct: 71 FQTGLVKREDLFI 83
Score = 34.7 bits (76), Expect = 0.063
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMS 626
KLW++ H +VE AC+ SL L L++ DL+LIH P++
Sbjct: 86 KLWNSDHG-HVVE-ACKDSLKKLRLDYLDLYLIHFPVA 121
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +1
Query: 310 GTFMPVIALGTALLPP---RLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 480
G +P + LGTA L + A+++GYR IDTA +YG+E+++G+A+ G
Sbjct: 25 GRAVPAVGLGTASLRSVGEESFRGALLAALEVGYRHIDTASVYGSERVVGEAVAGAARRG 84
Query: 481 TVR-RDELFI 507
+ R+E+F+
Sbjct: 85 VIACREEVFV 94
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
K+W T DLV + R SL +L +E+ D++L+H PMS++
Sbjct: 97 KVWCTQCHPDLVLPSLRESLQNLQMEYVDMYLVHWPMSVK 136
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 301 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 477
L G +P + LGT P + V A+ GYR ID A Y NEK +G A+K ++
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALKKLFEE 65
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 531 HRTDLVETACRISLADLGLEFFDLFLIHNP 620
H + V A +L DL LE+ DL+LIH P
Sbjct: 89 HAPEDVPEALDATLNDLQLEYLDLYLIHWP 118
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 274 SVKEVATLKLRDGTFMPVIALGTA---LLPPRLATEIVETAIDMGYRAIDTAYIYGNEKL 444
+V EVA L+ G MP + +GTA P A+++G+R DTA +YG E
Sbjct: 3 AVPEVA-LRHGAGRPMPAVGVGTADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAP 61
Query: 445 IGKAIKNKIDDGTV-RRDELFI 507
+G+AI G V R+E+F+
Sbjct: 62 LGEAIAEATRRGLVASREEVFV 83
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
KLW T LV + R SL +L +E+ DL+L+H P+S++
Sbjct: 86 KLWCTQCHPGLVLPSLRESLRNLQMEYVDLYLVHWPISVK 125
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 319 MPVIALGTALLP---PRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTV- 486
MP + +GTA P T + AI++GYR DTA IY E +G+A+ + G +
Sbjct: 16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIA 75
Query: 487 RRDELFI 507
R ++F+
Sbjct: 76 SRADVFV 82
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSL 629
K+W + V A R +L +LG+++ DL L+H P+SL
Sbjct: 85 KIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSL 123
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 289 ATLKLRDGTFMPVIALGTALLP--PRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 462
A L+ D MP + +G A P P + V A++ G+R DTA +Y E +G+AI
Sbjct: 8 AVLRHGDARPMPAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAIA 67
Query: 463 NKIDDGTV-RRDELFI 507
G + R+E F+
Sbjct: 68 EATRRGLLASREEAFV 83
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
KLW T DLV + R SL +L +E+ DL+LIH P+S++
Sbjct: 86 KLWCTQCHPDLVLPSLRESLRNLQMEYVDLYLIHLPISVK 125
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 310 GTFMPVIALGTALLPPRLAT--EIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGT 483
G MP + +GTA+ PR V AI+ GYR DTA Y E IG+A + G
Sbjct: 12 GFGMPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEAAAEAVRSGA 71
Query: 484 V-RRDELFI 507
+ R +LFI
Sbjct: 72 IASRADLFI 80
Score = 34.7 bits (76), Expect = 0.063
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
KLW + D V A R +L +L +E+ DL+L+H P+S++
Sbjct: 83 KLWCSDAHRDRVLPALRQTLWNLQMEYVDLYLVHWPVSMK 122
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 319 MPVIALGTALLPPRLATEIVET---AIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTV- 486
MP I +GTA P + E AI++GYR DTA +Y E + +A+ + G V
Sbjct: 18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVA 77
Query: 487 RRDELFI 507
R ++F+
Sbjct: 78 SRADVFV 84
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSL 629
KLW + V A R +L +LG+++ DL L+H P ++
Sbjct: 87 KLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATV 125
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +1
Query: 328 IALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFI 507
+A+ + + A ++ + GYR +DTA YG E+ +GK +K ++ G + R +LF+
Sbjct: 69 VAMASKPILSVFANNLIVNHLQAGYRHVDTAAQYGIEQEVGKGLKAAMEAG-INRKDLFV 127
Score = 34.7 bits (76), Expect = 0.063
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
K+W T + V A + +L DL L++ DL+LIH P L+
Sbjct: 130 KIWCTNLAPERVRPALKNTLKDLQLDYIDLYLIHWPFRLK 169
>11_01_0198 -
1556215-1556298,1556412-1556580,1556666-1556921,
1557000-1557114,1557191-1557441,1557565-1557892,
1558197-1558358,1558846-1558985,1559325-1559436,
1560028-1560200,1560411-1560506,1560687-1560930
Length = 709
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 154 VSRKRASAFGQRQTKTRHERPHR*TI*DQGRRTDEAKLKGSVKEVATLK-LRDGTFMPVI 330
V + + ++ K HE+PH T +GR D L G +KE LK +R + I
Sbjct: 339 VEQIKKGSYDHFMQKEIHEQPHSLTTTMRGRVKDSGVLLGGLKEKEYLKTIRRSRRLVFI 398
Query: 331 ALGTALLPPRLATEIVE 381
GT+ A VE
Sbjct: 399 GCGTSYNAALAARPFVE 415
>03_05_0500 + 24942047-24942541
Length = 164
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 636 FLAKTLDCG*GRGRKTPSPGLPVKSCRPSPP 544
+L K C RG +P P LP CRP PP
Sbjct: 116 WLRKHRRCPLCRGGLSPLPPLPKPGCRPMPP 146
>10_08_1039 - 22488405-22489088,22490827-22490927,22491038-22491224
Length = 323
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 546 PDQCDGMYSTIYPNEELV-SPHGAVVNLVLDRFSYELFVA 430
P + D Y ++ + LV SPH V L LDRF+ FV+
Sbjct: 29 PVRFDAAYMPLFGGDNLVPSPHARTVLLKLDRFTGSGFVS 68
>09_04_0493 -
18046553-18046990,18047061-18047180,18047290-18047478,
18047596-18047739,18048673-18048900,18049659-18049838,
18050304-18050399,18051096-18051262,18051356-18051773,
18052335-18052517,18053846-18053953,18054053-18054246,
18054503-18054662
Length = 874
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 274 SVKEVATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDM 396
S V +L LRDG F P I T+L+ LA E E A+D+
Sbjct: 664 SASAVLSLMLRDG-FYPTILTFTSLVKVVLAREDFEGALDL 703
>05_07_0084 - 27587307-27589175
Length = 622
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 522 STFHRTDLVETACRISLADLGLEFFDLFLIHNPMS 626
S+ R ++ A + LAD G FFDLF I P S
Sbjct: 4 SSLPRAAVLAVALLLLLADSGEAFFDLFSIFRPRS 38
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 591 TPSPGLPVKSCRPSPPDQCDGMYSTIYPN 505
TP+P P S PSPPD +PN
Sbjct: 125 TPTPKFPSSSANPSPPDAYPFTNYPFFPN 153
>01_06_1312 -
36205549-36206649,36207558-36207883,36209083-36209198,
36210472-36211577
Length = 882
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 566 NPAGRLHQISAMECTPQFTLMKSSSRLTVPSSILFLIAF 450
+P L I+ + CT F L+ S SR PS++ F +++
Sbjct: 131 DPLALLWTIALLMCTHLFFLISSLSRTMRPSTVFFRVSY 169
>08_02_0536 -
18302394-18302826,18302903-18303183,18303480-18303747,
18303959-18303996,18304459-18304761
Length = 440
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 358 RLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 474
R+ATE ++ AI+ GY+ I Y G+ +G+ ++ +++
Sbjct: 317 RVATEKIQEAINHGYKRIAVLYGGGHMPDLGRRLREELN 355
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1
Query: 373 IVETAIDMGYRAIDTAYIYG---NEKLIGKAIK 462
++ A+ G +DTA IYG NE L+GKA++
Sbjct: 49 LIHHAVAAGVTLLDTADIYGPHANEALLGKALQ 81
>01_06_1154 -
34955235-34955827,34955912-34956045,34956142-34956389,
34956431-34956901
Length = 481
Score = 28.3 bits (60), Expect = 5.4
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Frame = +1
Query: 55 VLEIFSKNKQNEDNLVHIVLLCVQEDNFGQDGGVSRKRASAFGQRQTKTRHERPHR*TI* 234
+LE K + NEDN+++IV D+ DG R G+ Q K R E T+
Sbjct: 260 ILEAQQKGEINEDNVLYIVENINVADDAVVDGVGDRGARVNHGEIQEKLRRELD---TVL 316
Query: 235 DQGRRTDEAK------LKGSVKEVATLKLRDGTFMPVIALGTALL 351
GR+ E L+ VKE L++ +P + L A L
Sbjct: 317 GPGRQITEPDTHRLPYLQAVVKETLRLRMAIPLLVPHMNLRDAEL 361
>11_05_0026 -
18462749-18462841,18463642-18463726,18463989-18464021,
18464278-18464411
Length = 114
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 201 RFCLPLSKRRRPLPGDSSILTEVIF 127
RF P +RR PLP +S +E +F
Sbjct: 9 RFSTPPQRRRNPLPSSASTTSEEVF 33
>12_02_0351 -
17829874-17830005,17830250-17830267,17830544-17830672,
17831037-17831336,17831447-17831675,17831762-17831989,
17832380-17832645
Length = 433
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 349 LPPRLATEIVETAIDMGYRAIDTAYIYG---NEKLIGKAIKNKIDDGTVRRDELFIRVNC 519
+P +A V A+D+G DT+ YG +E ++G ++ V RD + C
Sbjct: 141 VPRDVARAAVRRALDLGINFFDTSPYYGGTVSESVLGDCLR----AAGVPRDRFVVATKC 196
Query: 520 G 522
G
Sbjct: 197 G 197
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 310 GTFMPVIALGTALLPPR-LATEIVETAIDMGYRAIDTAYIYGNEKLI 447
G+ P +G+ ++ PR ++T + E +D G + + I+G+ LI
Sbjct: 2737 GSLEPFFGIGSDVISPRKISTSLAEN-VDFGRQCLTAVQIHGDNYLI 2782
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,807,618
Number of Sequences: 37544
Number of extensions: 348720
Number of successful extensions: 1261
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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