Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0317
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 52 4e-07
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 44 1e-04
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 38 0.005
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.085
SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6) 31 0.79
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_52410| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_41759| Best HMM Match : Ion_trans (HMM E-Value=1.1e-08) 27 9.7
SB_29853| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22) 27 9.7
SB_15003| Best HMM Match : WAP (HMM E-Value=0.0036) 27 9.7
SB_10352| Best HMM Match : 7tm_1 (HMM E-Value=0.001) 27 9.7
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 27 9.7
SB_22509| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 9.7
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +1
Query: 286 VATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 465
+AT+KL +G MPV+ LGT P V+ AI GYR ID AY Y NEK +G A++
Sbjct: 1 MATVKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALRE 60
Query: 466 KIDDGTVRRDELFI 507
+ V R +LFI
Sbjct: 61 LL-GSVVERKDLFI 73
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
KLW+T H V + C SL DLGL++ DL+LIH P+S +
Sbjct: 76 KLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFR 115
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +1
Query: 376 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFI 507
V AI++GYR ID A IYGNE IG+A+ + +G V+R+ELF+
Sbjct: 71 VRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFV 114
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLQ 632
KLW H D V AC+ +L +L L++ DL+LIH P++ +
Sbjct: 117 KLWCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFK 156
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 376 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDE 498
V A ++GYR ID A I+GNE G+A+ + G V+R+E
Sbjct: 18 VRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE 55
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 301 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 480
L DG +P LG L + + V A++ GYR IDTA Y NEK +G+A++ +
Sbjct: 3 LSDGYKIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR----ES 58
Query: 481 TVRRDELFI 507
V R E+++
Sbjct: 59 AVPRSEVYL 67
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 289 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYG-NEKLIGKAIKN 465
A + L G MPV+ GTA L + +V+TA++ GYR IDTA Y +E + KAI
Sbjct: 327 ADVLLASGYTMPVMGFGTATLGEDTLS-VVKTALETGYRLIDTAQGYPLSEPQVAKAI-- 383
Query: 466 KIDDGTVRRDELFI 507
D G R+D +FI
Sbjct: 384 -ADSGIPRKD-IFI 395
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +1
Query: 289 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 462
+T + DG +P++ LG + + A V A++ GYR IDTA Y NE+ +G+A++
Sbjct: 66 STRIMNDGRKIPLLGLGAHDIHSKQA---VLWALESGYRLIDTASRYHNEQSVGEAVR 120
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 34.3 bits (75), Expect = 0.085
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 385 AIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFI 507
A+ GYR +DTA IY NEK +G A++ ++R+++++
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVRK----SGLKREDIYV 89
>SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6)
Length = 349
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 507 NEELVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHI 391
N+ELV+ H VLD+F+ E FVA + + SVA +
Sbjct: 66 NQELVTAHDDAQENVLDQFADEAFVASAFAAMGESVASV 104
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -1
Query: 640 CIPCKDIGLWMRKRSKNSKPRSASEILQAVST 545
C C+D+ LWM + + K + L A+ T
Sbjct: 192 CHECEDMDLWMSNKERQFKSIESQNTLDAIQT 223
>SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 576 LPVKS-CRPSPPDQCDGMYSTIYPNEE 499
LP++ C P+P CDG ++ YP++E
Sbjct: 100 LPIQQPCAPAPT-ACDGFFNEAYPSDE 125
>SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -1
Query: 220 CEVSRVSFLFAVVQTPTPASGR--LLHLDRSYL-PEHKEAQYEPDYLH 86
C+ RV L + P G L HL R + P H+ Y+ DY+H
Sbjct: 322 CDYYRVKMLLEYLNRQEPGLGEATLRHLLRPRVDPPHEHPAYDYDYIH 369
>SB_52410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 579 GLPVKSCRPSPPDQCDGMYSTIYPNEELVSPHGAVVNLVLDRFSYELFVAV 427
G PV + R +PPD+ DG+ S I G V LV ++ +++ +V
Sbjct: 558 GFPVNASR-NPPDETDGLPSVI-TMARAFQAVGKSVTLVACKYHFDILTSV 606
>SB_41759| Best HMM Match : Ion_trans (HMM E-Value=1.1e-08)
Length = 276
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 474 VNLVLDRFS-YELFVAVNISGIYSSVAHINSCLDYF 370
V+ LDR+S Y L V + ++ +++ VAH +C+ YF
Sbjct: 163 VSRKLDRYSEYGLAVVILLTCLFTLVAHWLACIWYF 198
>SB_29853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = -2
Query: 204 SRFCLPLSKRRRPLPGDSSILTEVIFLNTK-----KHNMNQIIFILFVLTKDFQN 55
S F PLS RR+P P S+ LT + L + +M I+FI V T+ F++
Sbjct: 34 SAFSKPLSSRRKPDPRYSNALTTRLRLQHEDVQDFNVSMKFIVFIARVQTEKFRS 88
>SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22)
Length = 863
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 169 PASGRLLHLDRSYLPEHKEAQYEPDYLH 86
P S RLL + + + +H +A YE Y+H
Sbjct: 530 PTSDRLLEIAEARILKHLKAHYERKYVH 557
>SB_15003| Best HMM Match : WAP (HMM E-Value=0.0036)
Length = 230
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -2
Query: 573 PVKSCRPSPPDQC--DGMYSTIYP 508
P CRP P D+C D T+YP
Sbjct: 120 PPDECRPDPDDECKNDSQCLTLYP 143
>SB_10352| Best HMM Match : 7tm_1 (HMM E-Value=0.001)
Length = 220
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 86 MKIIWFILCFFVFRKI--TSVKMEESPGSGRRRLDNGKQKRDTRDLTDEQYKTRVAELTK 259
+ + + C F+ R+I + +E G G+RR + +++R +L D TRV L
Sbjct: 61 VSLFFLFSCLFITRRIGRRNSTLESHTGQGKRRQNGRERRRRNSELQDR--LTRVFSLVL 118
Query: 260 LS 265
++
Sbjct: 119 IA 120
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 171 RPLPGDSSILTEVIFLNTKKHNMNQIIFILFVLTKDFQNKN*KNIQN 31
R L GD + T T++H QI L + DF+N N N N
Sbjct: 517 RLLLGDPAPPTTNAERGTQEHRFQQIALTLMQVRNDFRNNNNNNNNN 563
>SB_22509| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 752
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 4 KTPSFRKSKILDIFLIFVLEIFSKNKQNEDNLVHIVLLCVQEDNFG 141
K P F K + + + +L++ +K++ D + +V+ C+Q DN G
Sbjct: 233 KLPPFPKEEDFEATIKSLLDL---SKKHSDTVHVVVMFCIQRDNTG 275
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,015,997
Number of Sequences: 59808
Number of extensions: 392478
Number of successful extensions: 4173
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4171
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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