Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0317
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    25   1.5  
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    25   2.7  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 554 GLQDFTGRPGLGVFRPLPHPQSNVF 628
           GL D  G+      RPL +PQ++VF
Sbjct: 57  GLWDTAGQEDYDRLRPLSYPQTDVF 81


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 261 SFVSSATLVLYCSSVRSLV-SRFCLPLSKRRRPLPGDSSILTE 136
           + V +A +V+  S  R    S + LPL K+R    G+  +L++
Sbjct: 24  TLVKNAIIVIDASPFRQWYESHYLLPLGKKRELKAGEEDVLSK 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,136
Number of Sequences: 2352
Number of extensions: 12285
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)