Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0317
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 71 9e-13
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 71 9e-13
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 58 5e-09
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U58749-1|AAK18877.1| 238|Caenorhabditis elegans Hypothetical pr... 31 0.53
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 31 0.70
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 28 4.9
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 4.9
AL023838-2|CAA19505.1| 452|Caenorhabditis elegans Hypothetical ... 28 4.9
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical... 27 8.6
AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna bin... 27 8.6
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 27 8.6
AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna bin... 27 8.6
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +1
Query: 289 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 468
A++KL +G MPVI LGT P V+TA+ GYR IDTA +Y NE+ IG AIK
Sbjct: 6 ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65
Query: 469 IDDGTVRRDELFIRVNCGVHSIA 537
+++G V+R+ELFI H +A
Sbjct: 66 LEEGVVKREELFITTKAWTHELA 88
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 70.5 bits (165), Expect = 9e-13
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +1
Query: 286 VATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 465
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 466 KIDDGTVRRDELFI 507
+D+G V+R+ELFI
Sbjct: 62 ILDEGKVKREELFI 75
Score = 34.3 bits (75), Expect = 0.075
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 620
K+W+TFH I L+DL L + DL LIH P
Sbjct: 78 KVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWP 113
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 70.5 bits (165), Expect = 9e-13
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +1
Query: 286 VATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 465
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 466 KIDDGTVRRDELFI 507
+D+G V+R+ELFI
Sbjct: 62 ILDEGKVKREELFI 75
Score = 34.3 bits (75), Expect = 0.075
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 513 KLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 620
K+W+TFH I L+DL L + DL LIH P
Sbjct: 78 KVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWP 113
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/85 (34%), Positives = 44/85 (51%)
Frame = +1
Query: 283 EVATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 462
+V L +G MP I LGT + ++ A+ GYR IDTA +Y NE IG A+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63
Query: 463 NKIDDGTVRRDELFIRVNCGVHSIA 537
+G ++R+++FI H +A
Sbjct: 64 ELFAEGILKREDIFITTKAFCHEVA 88
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 540 DLVETACRISLADLGLEFFDLFLIHNPMS 626
D+VE A R SL L L++ DL+L H P S
Sbjct: 90 DVVEEALRNSLKRLRLDYVDLYLAHIPAS 118
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 58.0 bits (134), Expect = 5e-09
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +1
Query: 292 TLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 471
T+ L G MPVI GT LP LA E V A++ GYR ID+A + N++ + IK+
Sbjct: 6 TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65
Query: 472 DDGTVRRDELFI 507
VRR+ELF+
Sbjct: 66 KIRKVRREELFL 77
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 286 VATLKLRDGTFMPVIALGTALLPPRLA-TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 462
V ++ L G +P+ LGT + T + A+D GYR IDTA++Y NE +IGK +
Sbjct: 3 VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62
Query: 463 NKIDDGTVRRDELFI 507
I G ++R+++F+
Sbjct: 63 EYISSGKLKREDIFV 77
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/71 (42%), Positives = 39/71 (54%)
Frame = +1
Query: 295 LKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 474
L L + MP + LGT V+ A+ GY IDTA Y NE+ IG AIK I
Sbjct: 48 LTLSNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIA 107
Query: 475 DGTVRRDELFI 507
+G V+R++LFI
Sbjct: 108 EGVVKREDLFI 118
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/72 (34%), Positives = 42/72 (58%)
Frame = +1
Query: 292 TLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 471
++KL G P+I LGT + +++ A+ GYR DTA +Y NEK IG A++ +
Sbjct: 2 SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61
Query: 472 DDGTVRRDELFI 507
++R+++FI
Sbjct: 62 PKHNLKREDIFI 73
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +1
Query: 298 KLRDGTFMPVIALGTALLPPRLATEI-VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 474
K DG MP I LG + + + ++ +E A+ GYR DTA +Y NE +G ++K +
Sbjct: 13 KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72
Query: 475 DGTVRRDELFI 507
+ R+++FI
Sbjct: 73 QFGLTREDVFI 83
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +1
Query: 298 KLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 477
KL++G +P +ALGT V+ A+ +GYR+ DTA Y NEK +G A+K +
Sbjct: 3 KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPR 62
Query: 478 GTVRRDELFI 507
+ +++++
Sbjct: 63 HNICSEDIYL 72
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 319 MPVIALGT-ALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRD 495
MP+I +GT + + ++++ GYR IDTA +Y NE IG+ ++ + ++R+
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 496 ELFI 507
+++I
Sbjct: 71 DIWI 74
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +1
Query: 298 KLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 477
KL G +P + GT + ++ A+ GYR DTA Y NEK +G+A+K +
Sbjct: 14 KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73
Query: 478 GTVRRDELFI 507
+ R ++F+
Sbjct: 74 HGLSRSDVFL 83
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = +1
Query: 286 VATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 465
+ T L + MP+I LGT ++ + GYR IDTA YG EK +G A+KN
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61
Query: 466 KIDDGTVRRDELFI 507
+V R+E+F+
Sbjct: 62 ----CSVPREEMFL 71
>U58749-1|AAK18877.1| 238|Caenorhabditis elegans Hypothetical
protein B0496.6 protein.
Length = 238
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -2
Query: 591 TPSPGLPVKSCRPSPPDQCDGMYSTIYPNEELVSPHGAVVNLVL 460
TPSP LP+ S P D + Y EEL+SP+G+V++ V+
Sbjct: 180 TPSP-LPIPS-EPKSSDIKVTVIEEYYKEEELLSPNGSVIDRVI 221
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1
Query: 370 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 459
+IVETAI G IDT Y Y +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 594 KTPSPGLPVKSCRPSPPDQCDGMYSTIYPNEELVSPHGAVVNLVLDRFSYELFV--AVNI 421
K P P P S +PSPP Q MY + PH + + F+ +L +++
Sbjct: 181 KAPEPAKPAASSQPSPPAQ---MYQAPSVPKSAPIPHSSSGRVSASPFAKKLAAENGLDL 237
Query: 420 SGIYSS 403
SG+ S
Sbjct: 238 SGVSGS 243
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 2/96 (2%)
Frame = -2
Query: 615 CG*GRGRKTPSPGLPVKSCRPSPPDQCDGMYSTIYPNEELVSPHGAVVNLVLDRFSY-EL 439
CG R ++ G V + P+P QCD NE + ++ Y
Sbjct: 536 CGRSRAQECGGGGTTVTTTTPAPAQQCDNSDGCF--NENVCCAVWGLMGECRKNTRYMAC 593
Query: 438 FVAVNISGIYSSVAHINSCLDYFR-C*PWRKQSRAQ 334
V+ Y + SC+DY R C W + Q
Sbjct: 594 NCRVSCGHCYPEDYNYGSCVDYHRSCAGWARVGECQ 629
>AL023838-2|CAA19505.1| 452|Caenorhabditis elegans Hypothetical
protein Y43C5A.2 protein.
Length = 452
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/62 (20%), Positives = 24/62 (38%)
Frame = -2
Query: 555 PSPPDQCDGMYSTIYPNEELVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSCLD 376
P PP C + + + + P+G+ V + D SY + + G + N D
Sbjct: 192 PKPPMDCSEISNLTSSGVQTIYPNGSPVQVYCDTTSYGTYTVIQSRGATGENVNFNITYD 251
Query: 375 YF 370
+
Sbjct: 252 KY 253
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 519 WSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 620
W+ +E A R SL L LE+ DL+L H P
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMP 86
>AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical
protein Y37A1B.12 protein.
Length = 335
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 162 PGDS-SILTEVIFLNTKKHNMNQIIFILFVLTKDFQNKN*KNIQNLRFSKTRRLL 1
PG + +TE+I NT + + FV TKDF N K+I++ + +L+
Sbjct: 90 PGTGKNYVTEIIAKNTFRSGLQSPYVKYFVATKDFPNN--KHIEDYKLKLKEQLI 142
>AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform a protein.
Length = 328
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -2
Query: 198 FCLPLSKRRRPLP---GDSSILTEVIFLNTKKH 109
F SK PLP GDS++ TE +F+ K+H
Sbjct: 67 FQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEH 99
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -2
Query: 198 FCLPLSKRRRPLP---GDSSILTEVIFLNTKKH 109
F SK PLP GDS++ TE +F+ K+H
Sbjct: 109 FQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEH 141
>AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform b protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -2
Query: 198 FCLPLSKRRRPLP---GDSSILTEVIFLNTKKH 109
F SK PLP GDS++ TE +F+ K+H
Sbjct: 67 FQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEH 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,208,586
Number of Sequences: 27780
Number of extensions: 295040
Number of successful extensions: 1134
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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