Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0316
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   3.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 276 YRSSRGHHEHPDTVPP 323
           Y SS+ HH H    PP
Sbjct: 48  YASSQHHHHHLQARPP 63


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 494 FIRPKTKSPCSLWSSHFT 441
           F+   + +P  LW+SH T
Sbjct: 425 FVARNSDTPIILWTSHLT 442


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 245 TAGRSWRLCFSSVYNDWTTLRIRSPSRCG 159
           T GR+W +   S  N    L I  P+  G
Sbjct: 299 TFGRAWAMDDESDINGTPPLHISGPAEAG 327


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 252  HAQHRSHKYRSSRGHHEHPDTVPPAG 329
            H   R     SSRG H H   V   G
Sbjct: 1160 HISRRRSMSASSRGDHHHLGAVTEEG 1185


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 252  HAQHRSHKYRSSRGHHEHPDTVPPAG 329
            H   R     SSRG H H   V   G
Sbjct: 1160 HISRRRSMSASSRGDHHHLGAVTEEG 1185


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 252  HAQHRSHKYRSSRGHHEHPDTVPPAG 329
            H   R     SSRG H H   V   G
Sbjct: 1160 HISRRRSMSASSRGDHHHLGAVTEEG 1185


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 252  HAQHRSHKYRSSRGHHEHPDTVPPAG 329
            H   R     SSRG H H   V   G
Sbjct: 1160 HISRRRSMSASSRGDHHHLGAVTEEG 1185


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 63   CQQKCCFSSLRRCSWPVL 116
            C  +C F S  R  W VL
Sbjct: 1111 CSNRCFFPSKIRICWNVL 1128


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 249 HHAQHRSHKYRSSRGHHEHP 308
           HH Q+ SH+  S+  +  HP
Sbjct: 317 HHQQNMSHEELSAMVNRCHP 336


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = +1

Query: 256 HNIDRINTEVHGVIMNIP 309
           +++ +IN +  G+ +N+P
Sbjct: 118 YHLQKINVQQSGIFINLP 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,756
Number of Sequences: 336
Number of extensions: 2954
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)