Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0315
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.0  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 512 IASFPPIVLLGVLSKSFTTCS 450
           I S+ PIV  G++   F TC+
Sbjct: 158 IFSYCPIVTTGIIKIQFATCA 178


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 644 NPGYPKVGRRIHHGRRGLFW 585
           NP Y  +       R+GLFW
Sbjct: 89  NPTYYNLADPARDSRKGLFW 108


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 288 FSLLWVYFLVVVVC 247
           F   + YFL V+VC
Sbjct: 154 FQFYYTYFLCVIVC 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,556
Number of Sequences: 336
Number of extensions: 2662
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)