Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0315
(676 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 76 2e-14
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 62 4e-10
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 52 3e-07
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 52 6e-07
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 51 1e-06
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 48 5e-06
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 48 9e-06
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 47 2e-05
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 45 5e-05
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 45 6e-05
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 44 9e-05
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 44 1e-04
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 44 1e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 44 1e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 43 2e-04
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 43 2e-04
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 43 2e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 42 5e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 42 6e-04
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 42 6e-04
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 41 8e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 41 0.001
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 40 0.002
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 38 0.007
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.010
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 38 0.010
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 38 0.010
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 37 0.013
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 36 0.030
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 36 0.040
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.069
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 34 0.091
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 33 0.16
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.21
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 33 0.28
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 32 0.37
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 31 0.64
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 31 0.64
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 31 0.85
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 31 1.1
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 29 3.4
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 29 3.4
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 28 6.0
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 28 7.9
SB_8368| Best HMM Match : VWA (HMM E-Value=0) 28 7.9
SB_10202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/75 (46%), Positives = 46/75 (61%)
Frame = +2
Query: 8 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 187
G S D N DD KLFVGGLS+ETT + L+++F YGE+ +++K D TGR RG
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRG 71
Query: 188 FAFIVFKAPESIDKV 232
FAF+ FK D +
Sbjct: 72 FAFVQFKHQSEADAI 86
Score = 64.5 bits (150), Expect = 7e-11
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 277 KKAKARHGKIFVGGLSSEISDDEIRNFFSE-FGTILEVEMPFDKTKNQRKGFCFITFESE 453
K R KIFVGGL E SD++IR +F + + + E+E + + N+R+GFCF++F+SE
Sbjct: 96 KPPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSE 155
Query: 454 QVVNDLLKTPKRTIGGKE 507
V+ + +T I G +
Sbjct: 156 DTVDKICETQFHNIEGNK 173
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFG-AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+K+FVGGL ET+D+++R++FG AY ++ I T+ ++ R RGF F+ F + +++DK+
Sbjct: 103 KKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKIC 162
Query: 236 AAGEH 250
H
Sbjct: 163 ETQFH 167
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/67 (31%), Positives = 40/67 (59%)
Frame = +1
Query: 298 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
GK+FVGGLS E + + ++ +FS++G ++ V++ D + +GF F+ F+ + + +
Sbjct: 29 GKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAIDP 88
Query: 478 TPKRTIG 498
P IG
Sbjct: 89 KPAAPIG 95
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/65 (40%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
RK+F+GGL+W TT++ L+D+F +G I + + +K D GRSRGF F+ +++ +S+++V+
Sbjct: 50 RKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVNEVL 106
Query: 236 AAGEH 250
+H
Sbjct: 107 KKKDH 111
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/69 (34%), Positives = 44/69 (63%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
KIF+GGL+ +++ ++++FS++GTI V+ K + +GF F+T+ES VN++LK
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLKK 108
Query: 481 PKRTIGGKE 507
+ +E
Sbjct: 109 KDHVLDDRE 117
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGA------YGEIESINVKTD-PNTGRSRGFAFIVFKAPE 217
RK+FVGGL+ T +++++++F + GE+ +++K D N R RGFAF+ F E
Sbjct: 139 RKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDE 198
Query: 218 SIDKVMAAGEH 250
++KV A H
Sbjct: 199 IVEKVCAMKYH 209
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/68 (30%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Frame = +1
Query: 280 KAKARHGKIFVGGLSSEISDDEIRNFFSE------FGTILEVEMPFDKTKNQR-KGFCFI 438
+A ++ KIFVGGL+S +++I+ +F+ G +++V++ D+ +R +GF F+
Sbjct: 133 EAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFV 192
Query: 439 TFESEQVV 462
TF+++++V
Sbjct: 193 TFDNDEIV 200
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
L V GL + TT+ E++++F +GEI+ VK DPNT RSRGF F+ FK E V++
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLS 174
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 298 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
G + V GL ++ E++ +F+ FG I E+ D + +GF F+ F+ ++ ++L
Sbjct: 115 GDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLS 174
Query: 478 TPKRTIG 498
T R G
Sbjct: 175 TSHRIQG 181
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 190
+KLFVG L TT+K L ++F +GE+ + + P R GF
Sbjct: 199 KKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRHFGF 239
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 274 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
PK+ K+FVG L ++ + +F++FG + +V +P + F F+TF S
Sbjct: 191 PKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP-----KPFRHFGFVTFAS 244
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = +2
Query: 26 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
N E D KLFVGGL+ ETT++ LR++F AYGE+ + V D T +SRGF ++ F
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
K+FVGGL+ E +++ +R +F +G + +V + D + +GF ++TF +V ++LK
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLK 73
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = +2
Query: 17 QDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE--IESIN--VKTDPNTGRSR 184
+D NSA + + +K+FVGGL + T +++++ + E ++ ++ +K + T + R
Sbjct: 96 RDDNSATS--HEKTKKIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDET-KHR 152
Query: 185 GFAFIVFKAPESIDKV 232
GFAF+ + D++
Sbjct: 153 GFAFVELNNEDQADEL 168
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEF--GTILEVEMPFDK-TKNQRKGFCFITFESEQVVNDL 471
KIFVGGL + + ++I+ + +V++ K + + +GF F+ +E ++L
Sbjct: 109 KIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADEL 168
Query: 472 LKTPKRTIGGK 504
K + GK
Sbjct: 169 CCVKKIHVKGK 179
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 271 DPKK-AKARHGKIFVGGLSSEISDDEIRNFFSEFGTI--LEVEMPFDKTKNQRKGFCFIT 441
DP + A R K+F+GGL E S+++++ + LE++M D+ N+ KG+CF+
Sbjct: 94 DPNELAHVRTKKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVN 153
Query: 442 FESEQVVNDLLKTPKRTIGGKE 507
F +E +V+ L + GK+
Sbjct: 154 FPNEHIVDKLYLVRHIQVKGKD 175
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Frame = +2
Query: 50 DDDR--KLFVGGLSWETTDKELRDHF-----GAYGEIESINVKTDPNTGRSRGFAFIVF- 205
DD + KLFVGGL+ +TT++ +R +F G+ ++ S+++ P G+SR F F+ F
Sbjct: 3 DDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPE-GKSRKFCFVEFS 61
Query: 206 KAPESIDKVM 235
+ ID ++
Sbjct: 62 NGSDIIDNIV 71
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEF--GTILEV-EMPFDKT-KNQRKGFCFITFESEQVVND 468
K+FVGGL+ + +++ +R +F F G+ +V + KT + + + FCF+ F + + D
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEFSNGSDIID 68
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVK--TDPNTGRSRGFAFIVFKAPESIDKV 232
+KLF+GGL E ++++++ + +K D T + +G+ F+ F +DK+
Sbjct: 104 KKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKL 163
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
K+FVGG+ E DD +R FF++FG I E + D+ + KG+ F+T + K
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKN 70
Query: 481 PKRTIGGKEA 510
+ I G++A
Sbjct: 71 KRPMIEGRQA 80
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
KLFVGG+ +E+ D LR F +GEI V D T +S+G+ F+ ++ +
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +2
Query: 107 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 244
LR HF +GE++ V DP T RSRGF F+ FK P+++D V+ +G
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSG 169
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 262 KKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF-I 438
+++D KK KIF+GGLS+ S+++++ +FS+FG + E + K++ +
Sbjct: 171 QELDGKKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV-SCEYETEDVKDELAAVLISV 229
Query: 439 TFESEQVVNDLLKTPKRT 492
+ N TP +T
Sbjct: 230 HSNGTHITNQTPSTPNQT 247
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +1
Query: 325 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 504
++ S + +R F +FG + E + D + +GF F+TF+ + V+ +L + + + GK
Sbjct: 117 TQASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Query: 505 E 507
+
Sbjct: 177 K 177
Score = 32.3 bits (70), Expect = 0.37
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEI 139
+K+F+GGLS T++++++ +F +G++
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 471
+IFV G + E ++ E+R FF E+G + E ++ DK KG+ FITFES++V + L
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +2
Query: 47 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
+D +++FV G + ETT+ ELR F YG ++ + D + G S+G+AFI F++ E D
Sbjct: 4 QDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKH-GVSKGYAFITFESQEVAD 62
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +2
Query: 38 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
A G + RKL++G L++ + + E+ F +G +E +++ D +GRSRGF F++ ++ +
Sbjct: 2 ADGENRGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSAD 60
Query: 218 SI 223
I
Sbjct: 61 QI 62
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 292 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVND 468
R K+++G L+ + EI F EFG + +V++ DK + +GF F+ +S +Q+
Sbjct: 7 RGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPA 65
Query: 469 LLKTPKRTIGGK 504
+ K + ++GG+
Sbjct: 66 IEKMNQSSVGGR 77
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/65 (29%), Positives = 39/65 (60%)
Frame = +2
Query: 56 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+R LFV LS +T + ++ +F YG++ +++ TD TG+S+G + + P +++K++
Sbjct: 318 ERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKIL 377
Query: 236 AAGEH 250
H
Sbjct: 378 EEPVH 382
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 208
+ R +FVGGL+ T ++ L+D+F +GE+ES+ + G SR + F++FK
Sbjct: 78 NSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFK 128
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/86 (23%), Positives = 42/86 (48%)
Frame = +1
Query: 247 THHNNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 426
+ +N+ PK + +FVGGL+S ++ ++++F +FG + V + +
Sbjct: 63 SRYNSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRI-MRTFLGYSRN 121
Query: 427 FCFITFESEQVVNDLLKTPKRTIGGK 504
+ F+ F+ + ++LK I GK
Sbjct: 122 YGFVLFKDDGPSKEVLK-KSHVINGK 146
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 187
R ++VGGL T++ +R+HF +G IE++ + + G G
Sbjct: 157 RVIYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTG 199
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVE 390
N K VD K++ I+VGGL S ++ +R F +FG I V+
Sbjct: 144 NGKTVDVGKSR-NFRVIYVGGLPSHFTEQTVREHFKKFGVIEAVK 187
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+KL V L ++TT ELR++F GE+ I++ N+ + A + F+ + I KV+
Sbjct: 236 KKLMVQDLDFDTTVDELREYFEKCGELTGIDLLI--NSEKRTCAAIVFFRNLKDIKKVV 292
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 29 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVF 205
SA D LF+G L E +K L D F A+G I ++ + D +TG S+GFAFI F
Sbjct: 90 SAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINF 149
Query: 206 KAPESIDKVMAA 241
+ ++ D + A
Sbjct: 150 ASFDASDAAIEA 161
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 274 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 453
P + + I+VGGL ++S+ I F + G ++ V MP D+ +G+ F+ F E
Sbjct: 5 PIAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGE 64
Query: 454 QVVNDLLK 477
+ + +K
Sbjct: 65 EDADYAIK 72
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFES 450
+F+G L +E+ + + + FS FG IL+ ++ D KGF FI F S
Sbjct: 102 LFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFAS 151
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/58 (29%), Positives = 36/58 (62%)
Frame = +2
Query: 50 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 223
D R +F+G L ++ ++ LR+ F G +ES+ + D TG +GF +++F++ +++
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAV 110
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 280 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 459
KA +F+G L +I ++ +R F+ G + V + D+ KGF ++ FES+
Sbjct: 50 KAHDHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDA 109
Query: 460 VNDLLKTPKRTIGGKE 507
V LK G++
Sbjct: 110 VVFALKMNNAEFKGRK 125
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 307 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 447
+VGGL+ E+ + + F FG I +V++P D T ++ +GF F+ FE
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
R +VGGL+ E +K L F +G+I + + D T + RGF F+ F+ E
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAE 57
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 262 KKVDPK--KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 435
KK+ PK + + G I++G + ++EI+ FF +FGT+ + + K + KG+ F
Sbjct: 84 KKIKPKGDEDELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAF 143
Query: 436 ITFESEQV 459
+ F ++V
Sbjct: 144 VEFACDEV 151
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 244
+++G + + E++ F +G + I + + RS+G+AF+ F A + + K+ A
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADT 158
Query: 245 EH 250
H
Sbjct: 159 MH 160
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +2
Query: 14 SQDHNSAEAPGRDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 184
S+D N ++ D ++ +F+ LS+++T K + + F +G+I V D T S+
Sbjct: 398 SEDDNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSK 457
Query: 185 GFAFIVFKAPESIDKVMAA 241
G AF+ +++ ES+ + +AA
Sbjct: 458 GSAFVKYRSAESVTQCLAA 476
Score = 34.7 bits (76), Expect = 0.069
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 NNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 432
+N K + + G +F+ LS + + I N F +FG I ++ D KG
Sbjct: 401 DNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSA 460
Query: 433 FITFESEQVVNDLL 474
F+ + S + V L
Sbjct: 461 FVKYRSAESVTQCL 474
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
K++V L+ ++ D ++ FS +G + V++P D+T N +GF ++ + + LK
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALK 1216
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
KL+V L+ +++ F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +2
Query: 41 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
P D L V L++ TT ++L+ F YG++ I + D NT SRGFAF+ F
Sbjct: 10 PEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRD 69
Query: 221 IDKVM 235
+ M
Sbjct: 70 AEDAM 74
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
L++ L D+ LR+ F YG I S V D + G S+GF F+ F +PE K +
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
++V + D+++++ G+I S+ V TDP G+S+GF F+ F+ PE ++ +
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAV 166
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 214
L+VG L+ + T+ L + F G + SI V D T RS G+A++ F+ P
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQP 64
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
+IF G L SE++D+ + F+++ + L+ ++ DK N+ KG+ F++F+ ND +K
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDP---NDFIK 273
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
+D ++F G L E TD+ L F Y + D + +S+G+ F+ FK P K
Sbjct: 215 NDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKA 274
Query: 233 M 235
M
Sbjct: 275 M 275
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
++ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ F + E ++K
Sbjct: 3 EEYRCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKA 61
Query: 233 M 235
+
Sbjct: 62 I 62
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/52 (23%), Positives = 29/52 (55%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
+ ++G LS + + + F +++V++ D+ + +GF F+TF S++
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGCD-VVDVKVITDRETGRPRGFGFVTFGSKE 56
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+L+VG L + T+ ++ F +G ++S+ + D T RS+G+ F+ F+ E+ + M
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
+++VG L I++ ++ F FGT+ V++ +D N+ KG+ F+ F +
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAE 294
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 43.2 bits (97), Expect = 2e-04
Identities = 14/61 (22%), Positives = 36/61 (59%)
Frame = +1
Query: 292 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 471
++ +I++ + ++ +D+I++ F FG ++ + + + KG+ FI +E++Q ND
Sbjct: 197 KYARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDA 256
Query: 472 L 474
+
Sbjct: 257 I 257
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
+++VG +++E ++ +R F +G I I++ DP + +GFAF+ + PE+
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEA 155
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/57 (28%), Positives = 35/57 (61%)
Frame = +1
Query: 277 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 447
++A A +++VG ++ E+ ++ IR F FG I ++++ +D + KGF F+ ++
Sbjct: 95 QRALALMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYD 151
Score = 35.5 bits (78), Expect = 0.040
Identities = 11/60 (18%), Positives = 36/60 (60%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 241
++++ + + + +++ F A+G++ ++ +P TG+ +G+ FI ++ +S + +A+
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 241
++VG L + T+ +L F YG++ + + D T SRG AFI+F +S +AA
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/58 (29%), Positives = 36/58 (62%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
++ K ++G L ++ + +L+D F Y ++ + V +D T R RGFAF+ F + ++++
Sbjct: 228 EECKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNME 284
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/58 (24%), Positives = 38/58 (65%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 474
K ++G L ++++ ++++ FS + +++V++ D+ + +GF F+TF S++ + D +
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAI 287
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 143 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 11 DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 190
D D + + DDD GG + ++ +H A G +E++ + TD NTG+ R F
Sbjct: 442 DDDDDDDDDDDDDDDDDDDDGGGDDDDDYERGAINHSNA-GPLENVRIPTDKNTGQQRSF 500
Query: 191 AFIVFKAPESI 223
F+ F +P S+
Sbjct: 501 GFVEFSSPVSV 511
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 435
+N V +K + K+ + + S I + +I FS G I V +P + +RKG C
Sbjct: 108 DNSDVSMEKQDT-YRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCI 166
Query: 436 ITFESEQVVNDLLKTPKRTIGG 501
+TF S +++K K I G
Sbjct: 167 VTFASVTEAFEVVKKRKHHIHG 188
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGE-IESIN-VKTDPNTGRSRGFAFIVFKAPESIDKV 232
R +FVG L T + + ++F GE +E + ++T +G+S+GFAF+ + E+++ V
Sbjct: 42 RTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRT--LSGKSKGFAFVRLRKKEAVESV 99
Query: 233 MAAGEH 250
+ +H
Sbjct: 100 LGRDDH 105
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/77 (19%), Positives = 35/77 (45%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 199
D++ +D RK+ + + + ++ +HF + GEI S+ + + T +G +
Sbjct: 108 DNSDVSMEKQDTYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIV 167
Query: 200 VFKAPESIDKVMAAGEH 250
F + +V+ +H
Sbjct: 168 TFASVTEAFEVVKKRKH 184
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 474
IFVG L + I +FS G +E + KGF F+ ++ V +L
Sbjct: 44 IFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVL 100
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 41.5 bits (93), Expect = 6e-04
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
+FVG + E S+++++ FSE G ++ + FD+ + KG+ F ++ ++
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQE 77
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
R +FVG + +E ++++L++ F G + S + D TG+ +G+ F +K E+
Sbjct: 25 RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQET 78
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 50 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAF 196
D K+F+GGL + ++++ ++GE+ + N+ D TG S+G+AF
Sbjct: 670 DSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAF 718
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
KIF+GGL + +++D+++ S FG + + D KG+ F +
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEY 721
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 340 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
D ++ FSEFG +L V +P K + KGF FI FES+Q
Sbjct: 102 DWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQ 140
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +2
Query: 107 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
L+ F +G++ +++ + G +GFAFI F++ + + V+
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVV 146
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 271 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
D + K +++ GL + +DD++ ++GTI+ + DK N KG+ F+ FES
Sbjct: 91 DTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFES 150
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 241
L++ GL TTD +L YG I S D +T +G+ F+ F++P S K +AA
Sbjct: 102 LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAA 160
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +2
Query: 35 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 214
+A + D LFV L+ TTD++L F +G I S V D TG S +AFI F+
Sbjct: 112 DADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKD 171
Query: 215 ESIDK 229
E ++
Sbjct: 172 EDCER 176
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
+FV L+ +D+++ FS FGTIL E+ D+ + + FI FE ++
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDE 172
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
D R +++ + L FG YG IE +++ TG+S+GF ++ ++ ES +
Sbjct: 61 DQRTIYIRDFRPDIRKSSLESVFGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRA 119
Query: 233 MAAGEH 250
+ AG H
Sbjct: 120 L-AGTH 124
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = +2
Query: 44 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIE 142
G +D K+F+GGL++ TT+++L+++F YG +E
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLKEYFSTYGMVE 229
Score = 37.1 bits (82), Expect = 0.013
Identities = 11/35 (31%), Positives = 25/35 (71%)
Frame = +1
Query: 274 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 378
P++ A GK+F+GGL+ ++++++ +FS +G +
Sbjct: 194 PQRGSANDGKVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINV 154
L+VGGL + T+++LRDHF +GE+ SI++
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISM 335
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 393
++VGGL ++++ ++R+ F +FG + + M
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISM 335
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
LFVG L +E T+ + D YG IE + + TG S+G+ F+ + E+
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATREN 166
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE----QVVNDL 471
+FVG L E ++ + + S +G I + + + KG+ F+ + + Q L
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 472 LKTPKRTIGGK 504
L T + IGG+
Sbjct: 175 LNTASKYIGGR 185
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
R LFV L + + L ++ F G + V +P G SRGFAF+ + E +K
Sbjct: 205 RTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK 262
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +2
Query: 11 DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 190
D +H E D+ L + + + ++++ FG G + S + D TG+S G+
Sbjct: 11 DINNHEPMENGTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGY 70
Query: 191 AFIVFKAPESIDKVM 235
AF+ + P+ +K +
Sbjct: 71 AFVNYDNPDDANKAV 85
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +1
Query: 259 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 426
+K + K + K+FVG + ++ E+++FF FG ++ ++ D+ K + KG
Sbjct: 66 SKDISKYKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 187
K+FVG + ++ +EL+D FG +G++ + D RS+G
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF---DKTKNQRKGFCFITFESEQVVNDL 471
K+FVGGL +I +DEI F FG+ L V+ P K+ KG+ F+ + E V L
Sbjct: 345 KVFVGGLPPDIDEDEIHASFCRFGS-LTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKL 403
Query: 472 L 474
+
Sbjct: 404 I 404
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGE--IESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
RK+FVGGL + + E+ F +G ++ + + +G+AF+++ S+ K+
Sbjct: 344 RKVFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKL 403
Query: 233 MAA 241
++A
Sbjct: 404 ISA 406
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 280 KAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
K++A G ++V + + + + I F + G + +V++ +D + Q KGFCF+T +++
Sbjct: 268 KSQAPPGCTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQE 327
Query: 457 VVNDLLKT 480
+ ++T
Sbjct: 328 EAQNAIQT 335
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 41 PGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
PG D+ + L+V + + + E R F AYG I + + D +TG +G F+++
Sbjct: 125 PGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLY 181
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 178
GGG +++ E PG R LFVG + TT +L++ F YGE+ +++K P
Sbjct: 231 GGGSISNYSEDEFDPGCT--RTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG--- 285
Query: 179 SRGFAFIVF 205
+ +AF+ F
Sbjct: 286 NNPYAFVQF 294
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV--KTDPNTGRSRGFAFI 199
+ R L+VG L ++++ HF YG +ES+ + K GR+ F+
Sbjct: 4 ETRHLWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFV 54
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPN 169
++VGG++ +++++ HFG YG + + + N
Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKVVINRVTN 364
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +1
Query: 268 VDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 447
VD K + +FV L EI+ + + +FFS G I + M D K R + +I F
Sbjct: 62 VDANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTR--YAYIEFA 119
Query: 448 SEQVVNDLLKTPKRTIGGK 504
Q + L+ GGK
Sbjct: 120 ETQAIVSALQYSGAIFGGK 138
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 140 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 56 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
+ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ +A ++
Sbjct: 81 EHRCYIGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGFGFVTLEAKKT 134
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +1
Query: 289 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
A H + ++G LS + + + F + +++V + D+ + +GF F+T E+++
Sbjct: 80 AEH-RCYIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLEAKK 133
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
+D +++VG L + +K+L D F YG I +++K G FAF+ F+ P +
Sbjct: 259 NDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKN--RRGAGPPFAFVEFEDPRDAE 314
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 241
LFV + E + ++ + F YGEI++++V D TG +G+A + ++ + + A
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEA 353
Score = 34.7 bits (76), Expect = 0.069
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
+FV + E +D+I FS++G I + + D+ KG+ + +E+
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYET 343
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 35 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
+ G+ + + V LS ET + +L++ F G I I + D T +S+GFAFI F
Sbjct: 173 DGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
++F+G + + +DE+ F E G I + + D KGF F TF ++ + +K
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVK 211
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++F+G + + + EL F G I + DP +G ++GFAF F
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTF 200
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +1
Query: 256 NNKKVDPKKA-----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILE---VEMPFDKTK 411
+NK++ P K + ++FVG + S EI FS+ L+ V + D+ K
Sbjct: 214 DNKEIRPGKRLGVCISVANSRLFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLSADQ-K 272
Query: 412 NQRKGFCFITFESEQVVN 465
+ +GF F+ +ES Q +
Sbjct: 273 GKNRGFAFLEYESHQAAS 290
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +2
Query: 38 APGRDD---DRKLFVGGLSWETTDKELRDHFGAYGEIESINVK---TDPNTGRSRGFAFI 199
AP DD +RKL++G L ++ + +GEIE PN G RG+ F+
Sbjct: 377 APEIDDAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFV 436
Query: 200 VFKAPESIDKVM 235
FK E K +
Sbjct: 437 EFKKKEDARKAL 448
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
++FVG + ++ +DE+ F G I EV + D Q +G+ F+ + S+ +KT
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKT 133
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
++FVG + + + EL F G I + + D N G++RG+AF+V+ + +
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFN-GQNRGYAFVVYTSKD 125
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 483
++VG L ++ D E++ FS++G+ILE ++ D KG+ FI E+ L +
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFINARGEKRRQRCLTSS 670
Query: 484 KR 489
+R
Sbjct: 671 RR 672
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 382 EVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKE 507
EV + D KN+ KGF F++F E + + TIGGK+
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQ 583
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 154
DDRKLFVG +S +++LR F +G IE + V
Sbjct: 212 DDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 245
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 26 NSAEAPGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 184
N RD + KLFVG + +K+LR F YG+I + + D TG+ +
Sbjct: 158 NGGTTSVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEV 387
K+FVG +S ++++R FS FGTI E+
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEEL 243
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 35.5 bits (78), Expect = 0.040
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 GGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 172
GGG + + GRD + L V LS++TT L A+ + V D +
Sbjct: 267 GGGRGRGGRGGFSGGRDQNPPNSSLIVRNLSYDTTTDSLG---AAFEGCSNAKVIFDRES 323
Query: 173 GRSRGFAFIVFKAPESIDKVMA 238
G SRGF F+ + E+ KV++
Sbjct: 324 GESRGFGFVDYDDVETAKKVLS 345
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
++ +F+G LS++ ++ L F G + V T GRSRGF + F + E +K
Sbjct: 178 EEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVIT--QEGRSRGFGYADFTSKEDYNKA 235
Query: 233 M 235
+
Sbjct: 236 L 236
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +1
Query: 262 KKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFIT 441
KK P K + +F+G LS + ++ + FF E G L + + +GF +
Sbjct: 171 KKTVPAKEEM---SVFLGNLSFDADEETLAAFFEEKG--LSATCRVITQEGRSRGFGYAD 225
Query: 442 FESEQVVNDLLKTPKRTIGGKE 507
F S++ N L+ G+E
Sbjct: 226 FTSKEDYNKALELNGEDCCGRE 247
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++F+G + + + EL GEI ++ DP TG ++GFAF F
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTF 201
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 453
++F+G + + +DE+ + G I E + D KGF F TF +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQ 204
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 34.7 bits (76), Expect = 0.069
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEV 387
++F+G L S + D ++ FS++GTILE+
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESI 148
D ++F+G L D ++ + F YG I I
Sbjct: 355 DSHQVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.4 bits (48), Expect(2) = 4.0
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = +2
Query: 182 RGFAFIVFKAPESIDKVMAAGEH 250
+ F F++F + E + +++A +H
Sbjct: 425 KNFGFVIFSSAEPVQQILANKKH 447
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 34.3 bits (75), Expect = 0.091
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 56 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 160
DR +FVG L K L+ +F YGE+ES+ ++
Sbjct: 20 DRTVFVGNLPLTLKKKALKKYFSKYGEVESVRFRS 54
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 34.3 bits (75), Expect = 0.091
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 465
+F+GGL I++ I F G I + + K +N RK FC + F +++ V+
Sbjct: 353 VFIGGLPESINEHIINEIFYVCGEITSIRISKGKGENARK-FCHLRFGAKESVD 405
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
R +F+GGL + + + F GEI SI + +R F + F A ES+D
Sbjct: 351 RTVFIGGLPESINEHIINEIFYVCGEITSIRISKGKGE-NARKFCHLRFGAKESVD 405
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRK----LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGRS 181
DHNS D + + GL +E++ ++L F I+ + K+ N G++
Sbjct: 316 DHNSDNGSNSQDQEATSTIVRMFGLPFESSKRDLYKFFNGLKIASIDLLKHKSGKNQGKN 375
Query: 182 RGFAFIVFKAPESIDKVM 235
G AF+VFK+ K +
Sbjct: 376 TGVAFVVFKSNNDASKAL 393
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 340 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
++IR+ F ++GTI +V + DK + +G C++ F
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 101 KELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
+++R F YG IE + V D T +RG ++ F
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 47 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
R + K+++G L + +E+ + FG YG ++ + V +P GFAF +F
Sbjct: 28 RAEMTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNP-----PGFAFCIF 75
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 128 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.49
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 367 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 271 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
DPK + +FVG L + IS ++R F +FG +L+V++ + Q + F+ F
Sbjct: 232 DPKATRT----LFVGNLETGISCQDLRLSFEKFGVVLDVDIK-RPARGQGNTYAFVKF 284
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 128 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.49
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 367 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 11 DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 190
+++D + E G+ LFVG L ++ T +++ DHF G S + T S+G
Sbjct: 58 ETEDVITKEQDGKKQRYILFVGNLPFDLTTEKVLDHFRCAGS-SSFRLLTKKTDNSSKGC 116
Query: 191 AFI 199
F+
Sbjct: 117 GFL 119
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/43 (27%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT-KNQRKGF 429
+++GGLS +++++ + F++FG + +V + D++ K+++ GF
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGF 568
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 241
K++ G L T+K+L + +G++ ++ K G+A++VFK + D+ +AA
Sbjct: 4 KVYCGRLPATATEKDLENLVKVFGKVREVDFK--------EGYAYVVFKENKDADRAVAA 55
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 397 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 507
FDK + +GF F+TFESE + T I K+
Sbjct: 4 FDKATQRHRGFGFVTFESENSADKACDTQYHLINNKK 40
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 31.1 bits (67), Expect = 0.85
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 163
++++G L + TT+ ++R F +YG + IN+K +
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN 37
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 392 CPLTKQRTKEKASVSSHLNLSKL*MICLRLPKEQLVERRRCEACNT 529
C L KQ EKA ++H+N+ L L Q+ E R + NT
Sbjct: 752 CMLRKQEDAEKALRANHMNIESAISDLLSLTASQIEEASRASSANT 797
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTD 163
L V GLS TT+++LR F YG +E+I + D
Sbjct: 183 LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYD 215
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 2 GGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS 181
GGG N + G+D L + L +K+L++ YG + N++ D N G S
Sbjct: 104 GGGGGGMENDVASDGKD----LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERDSN-GDS 158
Query: 182 RGFAFIVF 205
G A + F
Sbjct: 159 SGSALVRF 166
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 44 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 187
G R++ GL+ K L++ YG I++I V DP T +RG
Sbjct: 135 GTPPQREVLFSGLNDNVDKKFLQEICQKYGTIQTIKVYYDPQTKNTRG 182
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 65 LFVGGLSWETTDKE-LRDHFGAYGEIESINV 154
L+VGGL+ T +E L + FG +GEIE I +
Sbjct: 249 LYVGGLTLHTKLEEWLWEEFGEWGEIEDIRI 279
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYG-EIESINVKTDPNTG-------RSRGFAFIVFK 208
D K++ G L ++ T EL+ F A + + + +P RSRGF F+ F
Sbjct: 48 DPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFA 107
Query: 209 APE 217
PE
Sbjct: 108 NPE 110
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 328 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
+ +D+++R+ F FG I V++ D + KG+ ++ F
Sbjct: 63 DFNDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE 136
DH AP +L V GL WE D++L YGE
Sbjct: 69 DHLLQVAPAEVSRARLQVHGLPWEVPDEDLVALLSPYGE 107
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+LFVG LS ET ++L + F YG++ ++KT + FI ++ P ++ M
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT--------AYGFIEYEDPRDAEEAM 56
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 398 LTKQRTKEKASVSSHLNLSKL*MICLRLPKEQLVERRRCEACNTKTRWPRRHRH 559
L K + EK + HL S + + L L K Q + +AC+ + WP+ H
Sbjct: 187 LEKYKEAEKLNPRDHLLQSNMSHVLLSLGKFQEALDKAEQACHIRPNWPKVPSH 240
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 154
D + EA R++ R ++VG +S ET ++ F YG IE + V
Sbjct: 358 DRSFREA-SREERRIVYVGKISDETHKDDVWRRFRKYGPIEKVTV 401
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 14 SQDHNSAEAPGRDD-DRKLFVGGLSWETTDKELRDHFGAYGEI 139
S DHN +PG DD +R++ L ++ + E+R Y EI
Sbjct: 113 SPDHNDLTSPGHDDNEREVIQDSLPIDSPENEVRLAAVLYTEI 155
>SB_8368| Best HMM Match : VWA (HMM E-Value=0)
Length = 771
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGR-SRGFAFI 199
LF + +TD ++ HF Y E+ ++N+K D + R RG FI
Sbjct: 167 LFYARIVMYSTDASVKMHFNKYSGAEMNNVNIKRDIDELRLERGLTFI 214
>SB_10202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 465 IYNLLRFKCDETEAFSLVLCFVKGHLHF*DSSKFTEEVSDFII*DFTAESSDKNLP 298
+ NLL DET + C++K S F E + + +TAES D+++P
Sbjct: 364 VINLLLISNDETSHY----CWIKDMSRLLSSQCFDESIFPSRLVRYTAESPDEDIP 415
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,467,682
Number of Sequences: 59808
Number of extensions: 385825
Number of successful extensions: 1189
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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