Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0315
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 83 1e-16
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 83 1e-16
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 74 8e-14
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 74 8e-14
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 64 9e-11
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 64 9e-11
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 64 9e-11
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 60 1e-09
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 60 1e-09
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 60 1e-09
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 58 8e-09
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 54 9e-08
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 51 9e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 51 9e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 51 9e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 51 9e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 1e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 47 1e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 47 1e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 47 1e-05
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 47 1e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 47 1e-05
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 47 1e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 46 2e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 46 2e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 46 2e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 46 2e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 46 2e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 46 2e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 46 2e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 46 2e-05
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 46 3e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 8e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 44 8e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 44 8e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 44 1e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 44 1e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 42 3e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 42 3e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 42 3e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 7e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 41 0.001
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 40 0.002
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 40 0.002
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 40 0.002
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 40 0.002
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 40 0.002
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 40 0.002
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 39 0.003
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 39 0.003
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 39 0.003
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 39 0.003
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 38 0.007
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.011
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 37 0.011
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 37 0.011
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.015
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.015
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 36 0.020
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.026
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.046
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.046
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.046
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 34 0.081
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.19
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.19
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.19
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.19
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.19
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.19
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.25
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.25
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 32 0.32
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.57
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 31 0.57
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.3
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.7
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 4.0
U64609-4|AAB04601.3| 336|Caenorhabditis elegans Serpentine rece... 28 5.3
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +2
Query: 44 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 223
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 224 DKVMAAGEH 250
DKV+ EH
Sbjct: 100 DKVLNNREH 108
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Frame = +1
Query: 256 NNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 408
+ KK+DPK K + K+F+GGLS+ + ++++ +F +G + + + FDK
Sbjct: 111 DGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKA 170
Query: 409 KNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 504
+ +GF F+TF+S++V + + + I GK
Sbjct: 171 TQRHRGFGFVTFDSDEVADKVCEIHFHEINGK 202
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKV 191
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +1
Query: 298 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
GK+F+GGLS + + + +R++F FG + E + D + +GF FITF V+ +L
Sbjct: 45 GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLN 104
Query: 478 TPKRTIGGKE 507
+ + GK+
Sbjct: 105 NREHELDGKK 114
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +2
Query: 44 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 223
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 224 DKVMAAGEH 250
DKV+ EH
Sbjct: 100 DKVLNNREH 108
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Frame = +1
Query: 256 NNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 408
+ KK+DPK K + K+F+GGLS+ + ++++ +F +G + + + FDK
Sbjct: 111 DGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKA 170
Query: 409 KNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 504
+ +GF F+TF+S++V + + + I GK
Sbjct: 171 TQRHRGFGFVTFDSDEVADKVCEIHFHEINGK 202
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKV 191
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +1
Query: 298 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
GK+F+GGLS + + + +R++F FG + E + D + +GF FITF V+ +L
Sbjct: 45 GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLN 104
Query: 478 TPKRTIGGKE 507
+ + GK+
Sbjct: 105 NREHELDGKK 114
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 74.1 bits (174), Expect = 8e-14
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 KKVDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 438
K V+ K AK+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK R+ F FI
Sbjct: 97 KSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFI 156
Query: 439 TFESEQVVNDLLKTPKRTIGGKE 507
FE E+ + K+T G +E
Sbjct: 157 VFEEEESADKASSQTKQTFGTRE 179
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 50 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
++D+K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 230 VMAAGE 247
+AA E
Sbjct: 86 ALAARE 91
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADK 166
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/68 (30%), Positives = 45/68 (66%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 481 PKRTIGGK 504
++TI GK
Sbjct: 90 REQTIKGK 97
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 74.1 bits (174), Expect = 8e-14
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 KKVDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 438
K V+ K AK+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK R+ F FI
Sbjct: 97 KSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFI 156
Query: 439 TFESEQVVNDLLKTPKRTIGGKE 507
FE E+ + K+T G +E
Sbjct: 157 VFEEEESADKASSQTKQTFGTRE 179
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 50 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
++D+K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 230 VMAAGE 247
+AA E
Sbjct: 86 ALAARE 91
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADK 166
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/68 (30%), Positives = 45/68 (66%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 481 PKRTIGGK 504
++TI GK
Sbjct: 90 REQTIKGK 97
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 64.1 bits (149), Expect = 9e-11
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
RK+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 239 AGEH 250
H
Sbjct: 83 QRPH 86
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 481 PKRTIGGK 504
I GK
Sbjct: 84 RPHIIDGK 91
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFD 402
+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ + E+ D
Sbjct: 89 DGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILD 148
Query: 403 KTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 501
K + +GF F+TF+ V+ + + G
Sbjct: 149 KATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 239 AGEHXXXXXXXXXXXLKHDMGRFLSEDSAVKSQM 340
H + D+ + LS+D K+QM
Sbjct: 174 QKSHMVNGH-------RCDVRKGLSKDEMSKAQM 200
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 64.1 bits (149), Expect = 9e-11
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
RK+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 239 AGEH 250
H
Sbjct: 83 QRPH 86
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 481 PKRTIGGK 504
I GK
Sbjct: 84 RPHIIDGK 91
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFD 402
+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ + E+ D
Sbjct: 89 DGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILD 148
Query: 403 KTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 501
K + +GF F+TF+ V+ + + G
Sbjct: 149 KATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 239 AGEHXXXXXXXXXXXLKHDMGRFLSEDSAVKSQM 340
H + D+ + LS+D K+QM
Sbjct: 174 QKSHMVNGH-------RCDVRKGLSKDEMSKAQM 200
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 64.1 bits (149), Expect = 9e-11
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
RK+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 239 AGEH 250
H
Sbjct: 83 QRPH 86
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 481 PKRTIGGK 504
I GK
Sbjct: 84 RPHIIDGK 91
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFD 402
+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ + E+ D
Sbjct: 89 DGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILD 148
Query: 403 KTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 501
K + +GF F+TF+ V+ + + G
Sbjct: 149 KATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 239 AGEHXXXXXXXXXXXLKHDMGRFLSEDSAVKSQM 340
H + D+ + LS+D K+QM
Sbjct: 174 QKSHMVNGH-------RCDVRKGLSKDEMSKAQM 200
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 239 AGEH 250
H
Sbjct: 109 DRPH 112
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 481 PKRTIGGK 504
+GGK
Sbjct: 110 RPHKLGGK 117
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 239 AGEH 250
H
Sbjct: 129 DRPH 132
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 481 PKRTIGGK 504
+GGK
Sbjct: 130 RPHKLGGK 137
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 239 AGEH 250
H
Sbjct: 130 DRPH 133
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 481 PKRTIGGK 504
+GGK
Sbjct: 131 RPHKLGGK 138
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 57.6 bits (133), Expect = 8e-09
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +2
Query: 14 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 187
+Q N+ G D K+FVGGL + T+DK L ++F +G+IE V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 188 FAFIVFKAPESIDK 229
+ F+ K S ++
Sbjct: 78 YGFVTMKDRASAER 91
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
KIFVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 481 PKRTIGGKEA 510
P I G++A
Sbjct: 96 PNPIIDGRKA 105
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 54.0 bits (124), Expect = 9e-08
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +2
Query: 29 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 208
+AE + D R ++VG + W++T E+ +HF G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 209 APESI 223
ES+
Sbjct: 96 KLESV 100
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +2
Query: 35 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 214
EA ++ + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 215 ESIDKVMAAGEH 250
+ +K + H
Sbjct: 77 DGANKAIEQRPH 88
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 343 EIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 501
++ ++F +G+I V M +D +GF ITF+S+ N ++ I G
Sbjct: 40 QLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDG 92
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +2
Query: 26 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 199
N AE P +D R LFVG +++ET++ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 200 VF 205
+
Sbjct: 150 EY 151
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 238
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 238
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 238
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +2
Query: 2 GGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS 181
GGG + + + L V LS TT+K+LRD FG +GEI ++ D +G S
Sbjct: 57 GGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNS 116
Query: 182 RGFAFIVFKAPE 217
RGF FI F E
Sbjct: 117 RGFGFIYFNLIE 128
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 310 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
D +++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS 91
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +1
Query: 271 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
DP +A +G IF+ L I + + + FS FG IL ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 451 E-------QVVNDLLKTPKRTIGGK 504
E + VN +L + K+ GK
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 480
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 481 PKRTIGGK 504
+ IG K
Sbjct: 404 NSKMIGAK 411
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +1
Query: 292 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 471
++ +FV + +++ FS+FG I + D + + KGF F+ F +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 472 LK 477
++
Sbjct: 295 VE 296
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +1
Query: 271 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
DP +A +G IF+ L I + + + FS FG IL ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 451 E-------QVVNDLLKTPKRTIGGK 504
E + VN +L + K+ GK
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 480
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 481 PKRTIGGK 504
+ IG K
Sbjct: 404 NSKMIGAK 411
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +1
Query: 292 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 471
++ +FV + +++ FS+FG I + D + + KGF F+ F +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 472 LK 477
++
Sbjct: 295 VE 296
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 453
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 44 GRD-DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
G D R +FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 56 DRKLFVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
D +FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLA 304
Query: 233 MA 238
++
Sbjct: 305 LS 306
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 277 KKAKARHGKIFVGGLSSEISDDEIRNFFS-EFGTILEVEMPFDKTKNQRKGFCFITFESE 453
KK + IFVG L EI++D + FFS + G + V + DK + KGF F+ F+ +
Sbjct: 239 KKEFGKDMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQD 298
Query: 454 QVVN 465
V+
Sbjct: 299 SSVS 302
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 393
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 477
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 478 TPKR 489
TPK+
Sbjct: 126 TPKQ 129
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 122
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFD 402
+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ + E+ D
Sbjct: 51 DGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILD 110
Query: 403 KTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 501
K + +GF F+TF+ V+ + + G
Sbjct: 111 KATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 143
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 107 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 250
+R+ + +GEI I V DP T RSRGF F+ F +D M H
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPH 48
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 239 AGEHXXXXXXXXXXXLKHDMGRFLSEDSAVKSQM 340
H + D+ + LS+D K+QM
Sbjct: 136 QKSHMVNGH-------RCDVRKGLSKDEMSKAQM 162
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 346 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 504
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGK 53
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFD 402
+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ + E+ D
Sbjct: 51 DGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILD 110
Query: 403 KTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 501
K + +GF F+TF+ V+ + + G
Sbjct: 111 KATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 143
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 107 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 250
+R+ + +GEI I V DP T RSRGF F+ F +D M H
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPH 48
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 239 AGEHXXXXXXXXXXXLKHDMGRFLSEDSAVKSQM 340
H + D+ + LS+D K+QM
Sbjct: 136 QKSHMVNGH-------RCDVRKGLSKDEMSKAQM 162
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 346 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 504
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGK 53
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 477
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 478 TPKR 489
TPK+
Sbjct: 127 TPKQ 130
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 123
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 453
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 295 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 474
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 475 K 477
+
Sbjct: 378 E 378
Score = 35.1 bits (77), Expect = 0.046
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFESEQ 456
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ + EQ
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQ 264
Query: 457 VVNDLLKTPKR 489
V L+ R
Sbjct: 265 SVIKLMSACHR 275
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 220
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 221 IDKVMAA 241
+ K+M+A
Sbjct: 266 VIKLMSA 272
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 295 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 474
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 475 K 477
+
Sbjct: 378 E 378
Score = 35.1 bits (77), Expect = 0.046
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFESEQ 456
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ + EQ
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQ 264
Query: 457 VVNDLLKTPKR 489
V L+ R
Sbjct: 265 SVIKLMSACHR 275
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 220
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 221 IDKVMAA 241
+ K+M+A
Sbjct: 266 VIKLMSA 272
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 295 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 474
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 475 K 477
+
Sbjct: 164 E 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 295 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 474
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 475 K 477
+
Sbjct: 378 E 378
Score = 35.1 bits (77), Expect = 0.046
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFESEQ 456
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ + EQ
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQ 264
Query: 457 VVNDLLKTPKR 489
V L+ R
Sbjct: 265 SVIKLMSACHR 275
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 220
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 221 IDKVMAA 241
+ K+M+A
Sbjct: 266 VIKLMSA 272
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 29 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 205
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 206 KAPESIDKVMAA 241
+ E+ D + A
Sbjct: 150 ASFEASDTALEA 161
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
IFVG L E+ + + + FS FG IL+V ++ D KGF FI F S + + L+
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 47 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 29 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 205
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 206 KAPESIDKVMAA 241
+ E+ D + A
Sbjct: 160 ASFEASDTALEA 171
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 82
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
IFVG L E+ + + + FS FG IL+V ++ D KGF FI F S + + L+
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 47 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 199
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 200 VFKAPE 217
F+ PE
Sbjct: 363 CFEKPE 368
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 451 EQVV-NDLLKTPKRTIGGKE 507
E+ N + K + GK+
Sbjct: 170 EEAAQNAIQKVNGMLLAGKK 189
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 119 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 241
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 199
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 200 VFKAPE 217
F+ PE
Sbjct: 303 CFEKPE 308
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 119 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 241
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 199
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 200 VFKAPE 217
F+ PE
Sbjct: 300 CFEKPE 305
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 451 EQVV-NDLLKTPKRTIGGKE 507
E+ N + K + GK+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKK 126
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 119 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 241
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 208
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 199
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 200 VFKAPE 217
F+ PE
Sbjct: 363 CFEKPE 368
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 271 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 451 EQVV-NDLLKTPKRTIGGKE 507
E+ N + K + GK+
Sbjct: 170 EEAAQNAIQKVNGMLLAGKK 189
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 119 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 241
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +2
Query: 14 SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 193
SQ + E D + ++VG + + T +E+ HF G + + ++ D +G +GFA
Sbjct: 63 SQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFA 122
Query: 194 FIVFKAPESIDKVMA 238
++ F E + +A
Sbjct: 123 YVEFTEKEGMQNALA 137
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +1
Query: 277 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 457 VVNDLLKTPKRTIGGKE 507
+ + L + G++
Sbjct: 131 GMQNALAMTDSLLRGRQ 147
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 435
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 436 ITF 444
+TF
Sbjct: 101 VTF 103
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 193
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 194 FIVF 205
F+ F
Sbjct: 100 FVTF 103
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 253 HNNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 429
H+ ++ P + R+ K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 126 HHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 430 CFITF 444
F+TF
Sbjct: 185 AFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 435
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 436 ITF 444
+TF
Sbjct: 101 VTF 103
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 193
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 194 FIVF 205
F+ F
Sbjct: 100 FVTF 103
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 253 HNNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 429
H+ ++ P + R+ K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 126 HHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 430 CFITF 444
F+TF
Sbjct: 185 AFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 435
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 436 ITF 444
+TF
Sbjct: 101 VTF 103
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 193
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 194 FIVF 205
F+ F
Sbjct: 100 FVTF 103
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 253 HNNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 429
H+ ++ P + R+ K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 126 HHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 430 CFITF 444
F+TF
Sbjct: 185 AFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 435
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 436 ITF 444
+TF
Sbjct: 101 VTF 103
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 193
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 194 FIVF 205
F+ F
Sbjct: 100 FVTF 103
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 253 HNNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 429
H+ ++ P + R+ K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 126 HHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 430 CFITF 444
F+TF
Sbjct: 185 AFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 435
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 436 ITF 444
+TF
Sbjct: 101 VTF 103
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 193
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 194 FIVF 205
F+ F
Sbjct: 100 FVTF 103
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 253 HNNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 429
H+ ++ P + R+ K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 126 HHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 430 CFITF 444
F+TF
Sbjct: 185 AFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 435
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 436 ITF 444
+TF
Sbjct: 101 VTF 103
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 193
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 194 FIVF 205
F+ F
Sbjct: 100 FVTF 103
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 253 HNNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 429
H+ ++ P + R+ K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 126 HHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 430 CFITF 444
F+TF
Sbjct: 185 AFVTF 189
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 199
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 200 VFK 208
+K
Sbjct: 170 KYK 172
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 280 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 447
K K K+F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 20 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 199
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 200 VFK 208
+K
Sbjct: 170 KYK 172
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 280 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 447
K K K+F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 277 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
K +RH +FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 280 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQ 456
+A A + ++VG +++ + +DEIR F FG I EV + +G+ F+ FE+ E
Sbjct: 250 QAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKES 302
Query: 457 VVNDLLKTPKRTIGGK 504
+++ IGG+
Sbjct: 303 AARAIVQMNNADIGGQ 318
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 205
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 453
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/56 (30%), Positives = 38/56 (67%)
Frame = +1
Query: 289 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
++H +FVG LS ++S++ +++ F++FG + E ++ D + KG+ F++F ++Q
Sbjct: 132 SKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +2
Query: 23 HNSAEAPG--RDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 187
H+++E P R D K +FVG LS + +++ L+ F +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 188 FAFIVFKAPESIDKVMA 238
+ F+ F ++ + +A
Sbjct: 178 YGFVSFPNKQNAENAIA 194
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
D+ ++VG +S +TTD +LRD F YG+I + + +++ +AF+ ++ E K
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKA 288
Query: 233 M 235
+
Sbjct: 289 I 289
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
R L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +1
Query: 292 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 447
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 223
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 38 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 218 SIDK 229
K
Sbjct: 179 DAQK 182
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +1
Query: 259 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 438
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 439 TFESEQVV 462
F E+ V
Sbjct: 72 EFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 223
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 38 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 218 SIDK 229
K
Sbjct: 324 DAQK 327
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +1
Query: 259 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 438
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 439 TFESEQVV 462
F E+ V
Sbjct: 217 EFWDEESV 224
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 47 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
R D+ V L E + ELRD FG G + I + D TG +GFAF+ F++ +
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 227 KVMA 238
+ +A
Sbjct: 232 RAIA 235
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 310 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 80
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 292 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 247 THHNNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 420
+H+N K D + + ++VG ++S +++DEIR F+ FG I EV + +
Sbjct: 109 SHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKM 161
Query: 421 KGFCFITFES-EQVVNDLLKTPKRTIGGK 504
+G+ F+ F++ + +++ + +GG+
Sbjct: 162 QGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 190
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 90
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 292 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 247 THHNNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 420
+H+N K D + + ++VG ++S +++DEIR F+ FG I EV + +
Sbjct: 119 SHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKM 171
Query: 421 KGFCFITFES-EQVVNDLLKTPKRTIGGK 504
+G+ F+ F++ + +++ + +GG+
Sbjct: 172 QGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 200
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 193
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 292 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 187
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 247 THHNNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 420
+H+N K D + + ++VG ++S +++DEIR F+ FG I EV + +
Sbjct: 222 SHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKM 274
Query: 421 KGFCFITFES-EQVVNDLLKTPKRTIGGK 504
+G+ F+ F++ + +++ + +GG+
Sbjct: 275 QGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 303
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 161
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 292 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 247 THHNNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 420
+H+N K D + + ++VG ++S +++DEIR F+ FG I EV + +
Sbjct: 190 SHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKM 242
Query: 421 KGFCFITFES-EQVVNDLLKTPKRTIGGK 504
+G+ F+ F++ + +++ + +GG+
Sbjct: 243 QGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 271
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 411
++VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2
Query: 44 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 208
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2
Query: 44 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 208
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 35.1 bits (77), Expect = 0.046
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 62 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 238
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALA 61
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/110 (27%), Positives = 46/110 (41%)
Frame = +1
Query: 208 GPRVNRQGHGCW*THHNNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 387
GP N G+G + T + +++ GL +DD +R S++G I
Sbjct: 52 GPFGNSNGYGRY-TAPRGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIAST 110
Query: 388 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEAM*SVQHQNQ 537
+ DK N KG+ F+ FES Q + T G + M +Q Q Q
Sbjct: 111 KAIMDKATNNCKGYGFVDFESPQAAAAAV-DGLNTEGVQAQMAKLQQQEQ 159
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
D + +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 233 M 235
+
Sbjct: 113 L 113
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +2
Query: 2 GGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS 181
GGGD + AP + L + LS++TT +LR F YG+I +++ D + +S
Sbjct: 5 GGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQS 59
Query: 182 RGFAFIVF 205
+GF F+ F
Sbjct: 60 KGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +2
Query: 2 GGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS 181
GGGD + AP + L + LS++TT +LR F YG+I +++ D + +S
Sbjct: 5 GGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQS 59
Query: 182 RGFAFIVF 205
+GF F+ F
Sbjct: 60 KGFGFVRF 67
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 483
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q +
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAV-DG 167
Query: 484 KRTIGGKEAM*SVQHQNQ 537
T G + M +Q Q Q
Sbjct: 168 LNTEGVQAQMAKLQQQEQ 185
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +2
Query: 47 RDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
+DDD R LFVG + + ++E+R F +G++E +++KT NT +AF++F +
Sbjct: 162 QDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMF---Q 216
Query: 218 SIDKVMAA 241
++D+ + A
Sbjct: 217 TVDQAIQA 224
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES 450
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQT 217
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 59 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 151
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +2
Query: 47 RDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
+DDD R LFVG + + ++E+R F +G++E +++KT NT +AF++F +
Sbjct: 162 QDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMF---Q 216
Query: 218 SIDKVMAA 241
++D+ + A
Sbjct: 217 TVDQAIQA 224
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES 450
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQT 217
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 59 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 151
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +2
Query: 47 RDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
+DDD R LFVG + + ++E+R F +G++E +++KT NT +AF++F +
Sbjct: 139 QDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMF---Q 193
Query: 218 SIDKVMAA 241
++D+ + A
Sbjct: 194 TVDQAIQA 201
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES 450
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQT 194
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 59 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 151
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 228 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 258
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.1 bits (92), Expect = 7e-04
Identities = 14/57 (24%), Positives = 33/57 (57%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 474
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Frame = +2
Query: 11 DSQDHNSAEAPGRDDDRKL-FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 187
D + ++ AP R + + FV + E T+ ++ D F YG+I++I++ D TG +G
Sbjct: 38 DEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKG 97
Query: 188 FAFIVF----KAPESIDK 229
+A + + +A E+ID+
Sbjct: 98 YALVEYETQKEANEAIDQ 115
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 232
D + +F+G + + +T +E+ +HF G I + D T + + FA+I F SI+
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
Query: 233 M 235
+
Sbjct: 119 L 119
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 41 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 221 IDKVMAA 241
+K AA
Sbjct: 103 CEKARAA 109
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 256 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 435
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 436 ITF 444
+TF
Sbjct: 101 VTF 103
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 187
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 193
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 194 FIVF 205
F+ F
Sbjct: 100 FVTF 103
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 253 HNNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 420
H+ ++ P + R+ K+F+G LS + +++ +R F++FG I + + D+ R
Sbjct: 126 HHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR 182
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +2
Query: 77 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNAL 60
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 316 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 495
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 496 GGK 504
G +
Sbjct: 68 GSR 70
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +2
Query: 77 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNAL 60
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 316 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 495
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 496 GGK 504
G +
Sbjct: 68 GSR 70
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 41 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 220
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 221 IDKVMAA 241
+K AA
Sbjct: 103 CEKARAA 109
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 453
K+FV + + +DDE++ FS+FGT+ V K + KG F+ F++E
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTE 733
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVFKAP 214
APG +D R +FV L + TT+ E+R A + SI N+ RGFA++V +
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 215 ESIDKVM 235
+ + +
Sbjct: 643 QKAQQAL 649
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 50 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 230 VMA 238
+A
Sbjct: 347 AIA 349
Score = 34.7 bits (76), Expect = 0.061
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 50 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 230 VMA 238
+A
Sbjct: 347 AIA 349
Score = 34.7 bits (76), Expect = 0.061
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 50 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 230 VMA 238
+A
Sbjct: 322 AIA 324
Score = 34.7 bits (76), Expect = 0.061
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 50 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 230 VMA 238
+A
Sbjct: 325 AIA 327
Score = 34.7 bits (76), Expect = 0.061
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 444
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 480
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 481 PKRTIGGK 504
+ GK
Sbjct: 435 NGTNLAGK 442
Score = 34.7 bits (76), Expect = 0.061
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 217
L + L T +E+R F + GEIES + D TG+S G+ F+ + E
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREE 94
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
L+V G+ T EL F +G+I + + +D TG S+G F+ F + D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 56 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 235
+R L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAK 71
Query: 236 AAGEH 250
A EH
Sbjct: 72 TACEH 76
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYG 133
RK+FVGG+ W+ T+ L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 396
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/69 (23%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 477
++F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 478 TPKRTIGGK 504
+ +G +
Sbjct: 264 MDGKYVGNR 272
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 456
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAE 92
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 474
+++VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 36.3 bits (80), Expect = 0.020
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Frame = +2
Query: 5 GGDSQDHNSAEAPGRD--DDRKLFVGGLSWETTDKELRDHFGAYGEIESI-----NVKTD 163
GG++ D +++ A DDRK+ V +S + T +L+ F YG+I S KT
Sbjct: 92 GGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTS 151
Query: 164 -----PNTGRSRGFAFIVFKAPESIDKVMAA 241
P R+ G A I FK E D+ A
Sbjct: 152 VFGTLPKHSRNCGTATITFKKSEHADRAKNA 182
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 396
K+FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.046
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.046
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.1 bits (77), Expect = 0.046
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 34.3 bits (75), Expect = 0.081
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +2
Query: 5 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 184
GG D +++VG + + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 185 GFAFIVF 205
G+AF+ +
Sbjct: 242 GYAFVTY 248
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGT----ILEVEMPFDKTKNQRKGFCFITFESEQVVND 468
++F+G + S DEI ++ +P D K + +GFCF+ F + +D
Sbjct: 282 RLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTASD 340
Query: 469 L 471
+
Sbjct: 341 I 341
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/54 (24%), Positives = 32/54 (59%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 214
+ + +F+ LS++T ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 65 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 244
L V G+ ++TTD+ + +F G + +K + G S+GF F+ + +KV+A
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 245 EH 250
+H
Sbjct: 234 QH 235
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 44 GRDDDRKLFVGGLSWETTDKELRDHFG--AYGEIESINVKTDPNTGRS-RGFAFIVFKAP 214
GR ++FVG L+ + + +LR FG A IE+ V TD + RGFAF+ +
Sbjct: 254 GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFRGFAFVTLSSA 312
Query: 215 ESIDKVMAAG 244
E+ +++++ G
Sbjct: 313 EAAERIVSKG 322
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 277 KKAKARHGKIFVGGLSSEISDDEIRNFFS-EFGTILEVEMPFDK-TKNQRKGFCFITFES 450
K+ + +IFVG L+ ++ + ++R F E + +E + D +GF F+T S
Sbjct: 252 KQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSS 311
Query: 451 EQVVNDLLKTPKRTIGG 501
+ ++ T+ G
Sbjct: 312 AEAAERIVSKGSLTVNG 328
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 481 PK-RTIGGKEAM 513
+ +GG+ +
Sbjct: 56 LNGKELGGERVI 67
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 481 PK-RTIGGKEAM 513
+ +GG+ +
Sbjct: 56 LNGKELGGERVI 67
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 480
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 481 PK-RTIGGKEAM 513
+ +GG+ +
Sbjct: 56 LNGKELGGERVI 67
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 477
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 274 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 274 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 450
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +2
Query: 53 DDRKLFVGGLSWETTDKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 208
++R+++VG + ++ T+KEL D Y IE++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 274 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 384
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Frame = +2
Query: 53 DDRKLFVGGLSWETT-------DKELRDHFGAYGEIESI----NVKTDPNTGRSRGFAFI 199
++RK+++GG++ E + E++ F YGEIE + V PN FAFI
Sbjct: 324 NERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFI 383
Query: 200 VFKAPESIDKVMAA 241
+ + + A
Sbjct: 384 TMRNKAGVKAIFEA 397
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 53 DDRKLFVGGLSWET-TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
+ ++LFV + T KEL+ +FGAYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 230 VM 235
++
Sbjct: 87 LL 88
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +2
Query: 5 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 184
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 185 GFAFIVFKAPESIDKVMA 238
GF F+ + P+ D+ A
Sbjct: 140 GFGFVTMQNPDDADRARA 157
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 50 DDDRKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 226
D R +F+GG+ T ++L R G YG++ + + DP +G A + F ++
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 227 KVMA 238
+ ++
Sbjct: 422 RAIS 425
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTIL 381
K+F+GGL ++S++++ F FG +L
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +2
Query: 59 RKLFVGGLSWETTDKELRDHFGAYGEI 139
RK+F+GGL + +++++ FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +2
Query: 5 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 184
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 185 GFAFIVFKAPESIDKVMA 238
GF F+ + P+ D+ A
Sbjct: 140 GFGFVTMQNPDDADRARA 157
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 462
K F+GGL + +I F E ++ + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 463 N 465
N
Sbjct: 67 N 67
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 31.1 bits (67), Expect = 0.75
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 65 LFVGGL----SWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 229
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ ++
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER 289
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.7 bits (66), Expect = 0.99
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +1
Query: 301 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 468
++++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADD 50
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.3
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +1
Query: 337 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 459
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 405
++VG L S +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKGFCFIT 441
+FVG +S + SD+ IR +E G + + K Q GFC T
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFT 95
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 304 IFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKGFCFIT 441
+FVG +S + SD+ IR +E G + + K Q GFC T
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFT 95
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 488 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 375
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 68 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPESIDKVM 235
+VG L W TTD +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 71 VGGLSWETTDKELRDHFGAYGEIESIN--VKTDPNTGRSRGFAFIVFKAPESI 223
+G + WE K+++D F +YG I+ DP R+R + + P I
Sbjct: 69 LGKMMWEAGSKQVQDTFQSYGRIDLFRPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 286 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQ 456
K +H +++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 106 KIKHRTVYMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>U64609-4|AAB04601.3| 336|Caenorhabditis elegans Serpentine
receptor, class m protein2 protein.
Length = 336
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = -2
Query: 288 FSLLWVYFLVVVVCSPAAMTLSIDSGALNTMKANPRDLPVFGSVF------TLILSISPY 127
F L+V+F+V+ CSP L I + NP+ P+ ++ TLIL Y
Sbjct: 98 FLTLFVFFVVISCCSPTIQYLQICHVLSDNGHKNPKFGPIISTISVIFGIPTLILVYFGY 157
Query: 126 AP 121
P
Sbjct: 158 TP 159
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 156 RQIQTQADHEGLPSLCLR 209
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,290,692
Number of Sequences: 27780
Number of extensions: 289526
Number of successful extensions: 1088
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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