Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0314
(519 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 143 2e-35
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 85 6e-18
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 67 2e-12
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 61 1e-10
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 61 1e-10
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 60 2e-10
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 59 3e-10
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 56 3e-09
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 56 3e-09
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 56 4e-09
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 54 1e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 54 2e-08
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 53 2e-08
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 52 7e-08
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 46 3e-06
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 44 1e-05
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 36 0.003
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 27 1.3
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 27 2.2
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 2.9
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 3.9
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 3.9
SPBC16E9.17c |rem1||meiosis-specific cyclin Rem1|Schizosaccharom... 25 5.1
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 25 6.8
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 9.0
SPAC6G9.13c |bqt1|mug23, rec26|bouquet formation protein Bqt1|Sc... 25 9.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 9.0
SPBC3H7.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.0
SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces pombe... 25 9.0
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 143 bits (346), Expect = 2e-35
Identities = 66/87 (75%), Positives = 76/87 (87%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD 423
G G VGKSALTIQLIQ+HFVDEYDPTIEDSYRK+ IDGE LLD+LDTAGQEEYSAMR+
Sbjct: 15 GDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEYSAMRE 74
Query: 424 QYMRTGEGFLLVFAVNSAKSFEDIGSY 504
QYMRTGEGFLLV+ + S SF++I ++
Sbjct: 75 QYMRTGEGFLLVYNITSRSSFDEISTF 101
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 85.0 bits (201), Expect = 6e-18
Identities = 38/95 (40%), Positives = 62/95 (65%)
Frame = +1
Query: 229 QIGGCGCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 408
+I G SVGKS+LT+Q ++NHFV+ Y PTIE+++ K + G+ +I+DTAGQ+EY
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEY 67
Query: 409 SAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYRGR 513
S + ++ G++LV+++ S SFE + R +
Sbjct: 68 SILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDK 102
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 66.9 bits (156), Expect = 2e-12
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD 423
G G+VGK+ L I N F +Y PT+ D+Y V+I E L + DTAGQE+Y +R
Sbjct: 10 GDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRP 69
Query: 424 QYMRTGEGFLLVFAVNSAKSFEDI 495
+ FL+ F+V S SFE++
Sbjct: 70 LSYPQTDVFLVCFSVTSPASFENV 93
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 60.9 bits (141), Expect = 1e-10
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMR 420
G VGK+++ Q + F +Y TI D K+V++D + L + DTAGQE + ++
Sbjct: 15 GESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLG 74
Query: 421 DQYMRTGEGFLLVFAVNSAKSFEDIGSYR 507
+ R + +LV+ VN++KSFE + S+R
Sbjct: 75 VAFYRGADCCVLVYDVNNSKSFETLDSWR 103
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 60.9 bits (141), Expect = 1e-10
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD 423
G G+ GK++L + +F Y+PTI ++Y + +DG + L + DTAGQEEY +R
Sbjct: 20 GDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRS 79
Query: 424 QYMRTGEGFLLVFAVNSAKSFEDI 495
++ FAV+S S E++
Sbjct: 80 LSYSDTHVIMICFAVDSRDSLENV 103
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 60.1 bits (139), Expect = 2e-10
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMR 420
G VGK+ L Q + F EY TI D K VV+D + L + DTAGQE + ++
Sbjct: 15 GDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLG 74
Query: 421 DQYMRTGEGFLLVFAVNSAKSFEDIGSYR 507
+ R + ++V+ VN++KSF+ + ++R
Sbjct: 75 MAFYRGADCCVIVYNVNNSKSFDSVENWR 103
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 59.3 bits (137), Expect = 3e-10
Identities = 32/97 (32%), Positives = 52/97 (53%)
Frame = +1
Query: 211 SQDDRVQIGGCGCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDT 390
SQ R ++ G G+ GK++L +F EY PT+ ++Y +DG++ L + DT
Sbjct: 4 SQPIRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDT 63
Query: 391 AGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGS 501
AGQEEY +R L+ FA++S S E++ +
Sbjct: 64 AGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVST 100
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 56.0 bits (129), Expect = 3e-09
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMR 420
G VGKS L ++ +N F E TI + + +V+D + I DTAGQE Y A+
Sbjct: 17 GDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAIT 76
Query: 421 DQYMRTGEGFLLVFAVNSAKSFEDIGSY 504
Y R G L+V+ + SF+++G +
Sbjct: 77 SAYYRGAVGALIVYDITKQSSFDNVGRW 104
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 56.0 bits (129), Expect = 3e-09
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +1
Query: 211 SQDDRVQIGGCGCGSVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILD 387
S D +++ G VGKS L ++ ++ F + TI ++ + + +DG+ L I D
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 388 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSY 504
TAGQE + + Y R G LL++ V KSF+++ ++
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTW 103
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 55.6 bits (128), Expect = 4e-09
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD 423
G G+ GK+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R
Sbjct: 13 GDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRP 72
Query: 424 QYMRTGEGFLLVFAVNSAKSFEDI 495
L+ FAV+S S +++
Sbjct: 73 LSYPDSHVILICFAVDSPDSLDNV 96
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 54.0 bits (124), Expect = 1e-08
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Frame = +1
Query: 193 KNILYISQDDRVQIGGCGCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETC 369
KN++ I+Q ++ G +VGKS+L ++ +++ F D + TI ++ Q + ID T
Sbjct: 8 KNVVTINQ----KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS 63
Query: 370 L-LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSY 504
+ L+I DTAGQE Y ++ Y R ++V+ + A S E S+
Sbjct: 64 VKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSW 109
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 53.6 bits (123), Expect = 2e-08
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD 423
G G+ GK+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R
Sbjct: 13 GDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRP 72
Query: 424 QYMRTGEGFLLVFAVNSAKSFEDI 495
L+ F+V++ +S +++
Sbjct: 73 LSYPDSHVVLICFSVDAPESLDNV 96
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 53.2 bits (122), Expect = 2e-08
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMR 420
G VGKS L ++ + + + Y TI ++ + ++G+T L I DTAGQE + +
Sbjct: 15 GDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTIT 74
Query: 421 DQYMRTGEGFLLVFAVNSAKSFEDI 495
Y R G ++V+ V SF ++
Sbjct: 75 SSYYRGAHGIIIVYDVTDQDSFNNV 99
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 51.6 bits (118), Expect = 7e-08
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Frame = +1
Query: 211 SQDDRVQIGGCGCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDG-----ETCLL 375
S D V+I G GKS L + ++N + D+ T+ + +++ G + L
Sbjct: 5 SYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKL 64
Query: 376 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSY 504
I DTAGQE++ ++ Y R G +LV+ V + SFE++ S+
Sbjct: 65 QIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSW 107
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 46.4 bits (105), Expect = 3e-06
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 253 SVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQY 429
SVGK++L + + + F + Y TI D K + ++ T L + DTAGQE + ++ Y
Sbjct: 21 SVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 80
Query: 430 MRTGEGFLLVFAVNSAKSF 486
+R ++V+ + + SF
Sbjct: 81 IRDSSVAIIVYDITNHNSF 99
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 44.4 bits (100), Expect = 1e-05
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDIL--DTAGQEEYSAM 417
G G GK+ L I F + Y PT+ ++Y + + ++++ DTAGQEEY +
Sbjct: 21 GDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRL 80
Query: 418 RDQYMRTGEGFLLVFAVNSAKSFEDI 495
R LL F+++ S ++
Sbjct: 81 RPLSYPNSNVILLCFSIDCPASLNNV 106
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 36.3 bits (80), Expect = 0.003
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPT--IEDSYRKQVVIDGETCLLDILDTAGQEEYSAM 417
G G GK+ + + F +Y T +E GE C ++ DTAGQE+ +
Sbjct: 16 GDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICF-NVWDTAGQEKLGGL 74
Query: 418 RDQYMRTGEGFLLVFAVNSAKSFEDI 495
RD Y G+ +++F V S +++++
Sbjct: 75 RDGYYIQGQCGIIMFDVTSRITYKNV 100
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 232 IGGCGCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDG 360
IG G +G ++L + L+Q + P D Y+ ++DG
Sbjct: 281 IGLSGVHQLGNTSLAVSLVQEFYEKAGCPFDRDPYQDPAILDG 323
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -2
Query: 377 SSKHVSPSITTCLRYESSIVGSYSSTK*FCISCIVNADLPTLPHPQPP 234
S++H++ + L YE+ + SY S K + + L QPP
Sbjct: 224 SNRHINDQLIRLLSYETKLKESYPSLKRIVSNVFDRIEKEILKRVQPP 271
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 494 MSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITT-CLRYESSI 321
+S L + LTA +S+N V + L E + + SK +SP++ C RY+SS+
Sbjct: 428 ISQSLQSSLTAESSRNKELVAGFLMLSEEIGIQKWIIQSLSK-MSPTLNDFCRRYDSSM 485
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 253 SVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTA 393
S G S+L I+L Q H +DE+ + S K + L+ +LDT+
Sbjct: 319 SFGASSLLIELSQEHRLDEFFVSYWVSLIKSRKQKDKKRLISLLDTS 365
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 503 YEPMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSS 372
Y+ +S+ + A + S N PVR S++AE+ AV + S
Sbjct: 672 YDSVSASISARIKRQNSLNLKPVRFRISVLAEFFGSQAVFVLES 715
>SPBC16E9.17c |rem1||meiosis-specific cyclin
Rem1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 387 VQDVE*TRLTVDHDLFTVRILYRGIVFVHEVILYQLYSQCGFTNAPAP 244
+ +E +++ D+D F L IVF + +L L C +N +P
Sbjct: 55 ISSIEESQIQKDYDSFLASPLEEEIVFTEKQLLVDL-DVCSISNVQSP 101
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 404 SSWPAVSRMSSKHVSPSITTCLRYESSIVGSYSSTK*FCISCIVNADLP 258
++W + ++SKH + SI L SS +GS + +S ++A LP
Sbjct: 855 ATWHSFIYLTSKHDTTSIGLLLGLASSYLGSMDAKVTKLLSVHISALLP 903
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 364 TCLLDILDTAGQEEYSAMRDQYMRTGE-GFLLVFAVNSAKSFEDIGSYRGR 513
+C+LD++ T ++ Y R + M+ + G + +++AK E+ + R R
Sbjct: 274 SCMLDLIQTTEEKLYEQYRQEQMKVRQYGEPKLRTIDNAKFKEEEENLRKR 324
>SPAC6G9.13c |bqt1|mug23, rec26|bouquet formation protein
Bqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 132
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 248 HPQPPICTRSSCEIYKIFFHTM 183
+ Q P+CT S+CE + H++
Sbjct: 25 YTQTPVCTDSNCEHARFLKHSL 46
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 24.6 bits (51), Expect = 9.0
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -2
Query: 491 SSKLLALLTANTSKNPSPVRM-YWSLIAEYSSWPAVSRMSSKHVSPSITTCLRYESSIVG 315
SS LA + N++ + SP S A SS + S SS S SIT+ SSI
Sbjct: 87 SSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITS 146
Query: 314 S 312
S
Sbjct: 147 S 147
>SPBC3H7.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 287
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 44 IAFDSNNTLISRFTVTSSVIKHRPRQ 121
I+ S N+++SR + S + H PRQ
Sbjct: 157 ISLKSQNSIVSRTSNPFSCLNHSPRQ 182
>SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 24.6 bits (51), Expect = 9.0
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Frame = -1
Query: 381 DVE*TRLTVDHDLFTVRILYRGI-VFVHEVILYQLYSQCGFTN------APAPTTTNLYS 223
++E T+ VD D RI R + VF Y S N A T+LY+
Sbjct: 301 EIETTKRVVDEDTSNARISSRILDVFKTPGATYPFASNDPLMNYFEQFTENAKKRTDLYA 360
Query: 222 VILRDIQNIFSHNVTALENNAPES 151
+ +++ T +NN+PE+
Sbjct: 361 ATIGELEQHLEQVETTPQNNSPEA 384
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,282,102
Number of Sequences: 5004
Number of extensions: 50297
Number of successful extensions: 176
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -