Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0314
         (519 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    64   2e-12
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            53   7e-09
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    31   0.031
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    30   0.054
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    26   0.66 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.0  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 64.5 bits (150), Expect = 2e-12
 Identities = 33/86 (38%), Positives = 49/86 (56%)
 Frame = +1

Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD 423
           G G+VGK+ + I    + F  EY PT  D+Y   +V+DG    L + DTAGQE+Y  +R 
Sbjct: 13  GDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDYDRLRP 72

Query: 424 QYMRTGEGFLLVFAVNSAKSFEDIGS 501
                 + FL+ ++V S  SFE++ S
Sbjct: 73  LSYPQTDVFLICYSVASPSSFENVTS 98


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 52.8 bits (121), Expect = 7e-09
 Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +1

Query: 244 GCGSVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMR 420
           G  +VGKS+L ++ ++  F +  + TI  ++  Q + ID  T   +I DTAGQE Y ++ 
Sbjct: 31  GESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLA 90

Query: 421 DQYMRTGEGFLLVFAVNSAKSF 486
             Y R  +  ++V+ + ++ SF
Sbjct: 91  PMYYRGAQAAIVVYDIQNSDSF 112


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -3

Query: 412 RNTLPGQPCPGCRVNTSHRRSRLVYGTNPLSWDRIRPRS 296
           R+   G   P CR   + RRSR    T P SW R RP S
Sbjct: 260 RSPRSGGRWPSCRSPPARRRSR---STRPTSWPRSRPTS 295


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 29.9 bits (64), Expect = 0.054
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 388 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDI 495
           +AGQE+Y  +R       + FL+ F+V S  SFE++
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV 36


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 26.2 bits (55), Expect = 0.66
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 238 GCGCGSVGKSALTIQLIQ-NHFVDEYDPTIE 327
           G GCG  G   L  +L Q N FV  YDP+ E
Sbjct: 168 GNGCGQNGNGELDTELFQPNEFV-PYDPSQE 197


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +1

Query: 283 LIQNHFVDEYDPTIEDSYRKQVVID-GET---CLLDILDTAGQEEYSAMRDQYMRTGEGF 450
           L++N  + +Y  T  D  R  V  D GE    C L +L    + EYSA  D Y    EGF
Sbjct: 472 LMENSVMKKYT-TKSDQARHYVQYDQGEDRWLCTL-LLKQKFRVEYSAASDAYTHAPEGF 529


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,625
Number of Sequences: 2352
Number of extensions: 12396
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)