Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0312
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.6  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 97  RERLVKGLSCPRSPAPA 47
           R+RLVK   C RS AP+
Sbjct: 137 RDRLVKEGICDRSTAPS 153


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 89  TLSSLY*ITPFPSLAFREIHNTFAFRIYIVTSI 187
           T+  L+ +        REI+  FAF++ + TS+
Sbjct: 132 TIKKLFNLHKILVKVVREINGIFAFQVLMCTSM 164


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 442 ILVLRFVTSVMSCWLFLMKANLFVQLFF 525
           ILV++F  S+++  L + K +L   L+F
Sbjct: 252 ILVVQFFCSLVALCLTMYKLSLTEDLYF 279


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 214 NNLGSTRYVAVTGWFTFPVFFLDYEGQLWNVYCSKQ 321
           +N+ STR   +     FP F+ D+E Q +   C  Q
Sbjct: 18  DNVSSTRTKYLRT--NFPNFYNDFEVQRYTWKCENQ 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,139
Number of Sequences: 336
Number of extensions: 2168
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)