Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0312
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.7  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   8.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.8  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 254 GLHSRCFSLTTKGSSGMFIAVNSYPQRREPL 346
           G  +RC+SL +  +S   I++ ++ Q+R  L
Sbjct: 210 GSIARCWSLDSTAASDEDISLTTHQQKRHKL 240


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 110 ITPFPSLAFREIHNTFAFRIYIVTSI 187
           + PFP+ AFR+  ++ A+R     S+
Sbjct: 89  LLPFPAAAFRQDVHSAAYRCVASNSV 114


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 110 ITPFPSLAFREIHNTFAFRIYIVTSI 187
           + PFP+ AFR+  ++ A+R     S+
Sbjct: 89  LLPFPAAAFRQDVHSAAYRCVASNSV 114


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 285 VVKEKHRECKPTCYRDITCTS*VILS 208
           VV +  +E  PTC  D+T T  V+ S
Sbjct: 172 VVLDDSKEEHPTCALDLTPTYAVVSS 197


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 182 SIVSDSNMHDKIT 220
           S +SD+N+H KIT
Sbjct: 105 SAISDTNVHLKIT 117


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 75  SPFTRRSRLYIK*PPFHLSPFERS 146
           SP T  S  Y+   PF  S +E +
Sbjct: 269 SPLTSHSLYYVNMEPFMKSQYEEN 292


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,772
Number of Sequences: 438
Number of extensions: 2735
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)