Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0308
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.9  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = -2

Query: 377 HITCENVCIFYTLWHIWVTCTMIHY*TFYKYSFSSRLVFHLIISTMCRSTG 225
           +IT   V + + ++HI++        +FYK +    + F +I       TG
Sbjct: 46  NITASAVLLPFAIYHIFMHIVPTKLISFYKSTAILEIAFEVIFIVTVWMTG 96


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 264 VSSHNFNHVQINRF 223
           +S HN +  Q+NRF
Sbjct: 623 ISDHNDDETQVNRF 636


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 264 VSSHNFNHVQINRF 223
           +S HN +  Q+NRF
Sbjct: 623 ISDHNDDETQVNRF 636


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 264 VSSHNFNHVQINRF 223
           +S HN +  Q+NRF
Sbjct: 623 ISDHNDDETQVNRF 636


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 264 VSSHNFNHVQINRF 223
           +S HN +  Q+NRF
Sbjct: 623 ISDHNDDETQVNRF 636


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 270 TATETVLVKGLVMDHGARHPDMPKRVE 350
           TATE + + GL+ +      D P+ V+
Sbjct: 122 TATEQLCIGGLLYNERTHSCDWPENVD 148


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 193 QRKHQLAHLPSLGGP 149
           Q++H  A+LP   GP
Sbjct: 434 QKRHPFAYLPFSAGP 448


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 193 QRKHQLAHLPSLGGP 149
           Q++H  A+LP   GP
Sbjct: 434 QKRHPFAYLPFSAGP 448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,978
Number of Sequences: 336
Number of extensions: 3423
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)