Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0308
(711 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 128 4e-30
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 54 1e-07
10_08_0620 - 19321612-19323237 52 5e-07
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 44 2e-04
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 42 6e-04
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 37 0.014
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 34 0.097
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 34 0.097
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 33 0.17
02_02_0480 + 10799242-10799365,10799748-10800044,10800081-108002... 33 0.30
09_04_0662 + 19296395-19296532,19296650-19296742,19296976-192971... 31 0.68
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 31 0.68
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 31 0.68
10_08_0533 + 18592177-18592581,18592674-18593906 31 1.2
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 31 1.2
01_06_1480 - 37660591-37660720,37660899-37660930,37661061-376611... 31 1.2
12_02_0591 + 20864861-20867329 29 2.8
06_01_0905 - 6974369-6974456,6974647-6974777 29 2.8
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 29 3.6
11_01_0522 - 4103138-4103926 28 6.4
01_06_0482 - 29672720-29673854,29673941-29676267 28 6.4
01_05_0616 - 23684400-23685329,23686320-23686336,23687977-23688142 28 6.4
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 128 bits (309), Expect = 4e-30
Identities = 55/83 (66%), Positives = 71/83 (85%)
Frame = +3
Query: 258 MKHKTATETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAED 437
M+HK +T LV+GLV+DHG+RHPDM +R EN YILTCNVSLEYEK+E+N+GFFY +AE
Sbjct: 215 MRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQ 274
Query: 438 REKLVAAEREFIDQRVRKIVALK 506
REK+VAAER +D+RV++I+ LK
Sbjct: 275 REKMVAAERRQVDERVKRIIELK 297
Score = 99.1 bits (236), Expect = 3e-21
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +2
Query: 503 QKKLCDGTDNTFVVINQKGIDPLSLDAFAKEGIIGLRRAKRRNMERLALACGGGPLLTLV 682
+ K+C G D FVVINQKGIDP SLD A+ GIIGLRRAKRRNMERL LAC GG + V
Sbjct: 297 KNKVCAGNDKNFVVINQKGIDPPSLDLLARAGIIGLRRAKRRNMERLVLAC-GGEAVDSV 355
Query: 683 DDLTEDALG 709
DDLTED LG
Sbjct: 356 DDLTEDCLG 364
Score = 73.7 bits (173), Expect = 1e-13
Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 20/105 (19%)
Frame = +1
Query: 1 ISEGLHPRIITEGFDIARNKSLEVLESMKIPI----EIARENLVDVARTSLKTKV----- 153
I EG HPR + +GFD+A+ +LE LE K + E RE L +ART+L+TKV
Sbjct: 109 IDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVVMGDEPDREILKMIARTTLRTKVGAVCF 168
Query: 154 -----------HPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIM 255
+ LAD LTD V+AVL IR P +P+DL MVEIM
Sbjct: 169 LAFKLSLLGQLYEGLADQLTDIVVNAVLCIRKPDEPIDLFMVEIM 213
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 ISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIA-RENLVDVARTSLKTKVHPSLADVL 177
+S G HP + +++EVL +M IPIE++ R++LV A T+L +KV + +L
Sbjct: 118 LSAGAHPTAAADALHRLATRAVEVLHAMAIPIELSDRDSLVKSASTALNSKVVSQYSSLL 177
Query: 178 TDACVDAVLTIRTPGKP--VDLHMVEIMR 258
+ VDA L++ P P +DL + +++
Sbjct: 178 SPLAVDAALSVVDPAHPDLLDLRDIRVVK 206
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 270 TATETVLVKGLVMDHGARHP-DMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREK 446
T +T L++GL+ D A H P RVENA I + KT++ ++
Sbjct: 211 TVDDTELIRGLIFDKKASHAAGGPTRVENAKIAVIQFQVSPPKTDIEQSVIVSDYAQMDR 270
Query: 447 LVAAEREFIDQRVRKIVA 500
++ ER +I V+KI A
Sbjct: 271 ILREERNYILGMVKKIKA 288
>10_08_0620 - 19321612-19323237
Length = 541
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 ISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIA-RENLVDVARTSLKTKVHPSLADVL 177
+S G HP + + +++EVL M IP+E++ R+ LV A T+L +KV + +L
Sbjct: 122 LSAGAHPTAAADALHLLAARAVEVLHGMAIPVELSDRDALVKSASTALNSKVVSQYSTLL 181
Query: 178 TDACVDAVLTIRTPGKP--VDLHMVEIMR 258
+ VDA L + P P +DL + +++
Sbjct: 182 SPLAVDAALAVVDPAHPYLLDLRDIRVVK 210
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +3
Query: 279 ETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAA 458
+T LV G+++D HP MPKR+E+A I E K + + E + L
Sbjct: 217 DTELVYGIIVDKDMSHPQMPKRIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQMLREQ 276
Query: 459 EREFIDQRVRK 491
E+++ D+ V+K
Sbjct: 277 EQKYFDEMVQK 287
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 ISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIAREN---LVDVARTSLKTKVHPSLAD 171
+ G+HP I EG+++A + + LE + E + N LV T+L +K+
Sbjct: 120 LERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKR 179
Query: 172 VLTDACVDAVLTIR-TPGKPVDLHMVEI 252
L + V AVL + K V+L ++++
Sbjct: 180 TLAEIAVKAVLAVADLERKDVNLDLIKV 207
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 ISEGLHPRIITEGFDIARNKSLEVLESMKIPIEI-ARENLVDVARTSLKTKVHPSLADVL 177
I + HP +I + A + +L VL+ + IP+++ R ++ + ++S+ TK D++
Sbjct: 113 IDKNYHPTVICRAYTKALDDALSVLDKIAIPVDVDDRVAMLGLVKSSIGTKFTGQFGDLI 172
Query: 178 TDACVDAVLT 207
D +DA T
Sbjct: 173 ADLAIDATTT 182
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +2
Query: 539 VVINQKGIDPLSLDAFAKEGIIGLRRAKRRNMERLALACGGGPLLTLVDDLTEDALG 709
+VI +KG+ L++ K G+ +RR ++ + R+A AC G ++ ++L E +G
Sbjct: 291 LVITEKGLSDLAVHYLGKAGVSAIRRLRKTDNNRIAKAC-GAVIVNRPEELQESDVG 346
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 279 ETVLVKGLVMDHGARHPD-MPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVA 455
++ ++KG++++ P M +++ N I+ + LEY+K E + ED + ++
Sbjct: 212 DSKVLKGVMINKDVVAPGKMRRKIVNPRIILLDCPLEYKKGENQTNAELMKEEDWQVMLQ 271
Query: 456 AEREFIDQRVRKIVALKKNYATVLTILSSLS 548
E E+I+ +I+ K + LS L+
Sbjct: 272 MEEEYIENLCAQILKFKPDLVITEKGLSDLA 302
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +2
Query: 539 VVINQKGIDPLSLDAFAKEGIIGLRRAKRRNMERLALACGGGPLLTLVDDLTEDALG 709
+V+ +KG+ L++ +K G+ +RR ++ + R+A AC G ++ ++L E +G
Sbjct: 291 LVVTEKGLSDLAIHYLSKAGVSAIRRLRKTDNNRIAKAC-GAVIVNRPEELQESDVG 346
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 288 LVKGLVMDHGARHPD-MPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAER 464
++KG++ + P M +++ N I+ + +EY+K E + ED + L+ E
Sbjct: 215 VLKGVMFNKDVVAPGKMRRKIVNPRIILLDCPVEYKKGENQTNAELMKEEDWQVLLEMEE 274
Query: 465 EFIDQRVRKIVALKKNYATVLTILSSLS 548
E+I +I+ K + LS L+
Sbjct: 275 EYIKNLCAQILKFKPDLVVTEKGLSDLA 302
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 336 PKRVENAYILTCNVSLEYEKTEV-NSGFFYKSAEDREKLVAAEREFIDQRVRKIV 497
PKR+ENA IL N +++ +K ++ + S ++ AAE++ + ++V+KI+
Sbjct: 199 PKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAEKQKMREKVQKII 253
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 476 SKSKKDRCSQKKLCDGTDNTFVVINQKGIDPLSLDAFAKEGIIGLRRAKRRNMERLALAC 655
++ +K R +K+ N FV N++ I + FA GI+ + A +ERLAL
Sbjct: 240 AEKQKMREKVQKIIGHGINCFV--NRQLIYNFPEELFADAGILAIEHADFEGIERLALVT 297
Query: 656 GG 661
GG
Sbjct: 298 GG 299
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 336 PKRVENAYILTCNVSLEYEKTEV-NSGFFYKSAEDREKLVAAEREFIDQRVRKIV 497
PKR+ENA IL N +++ +K ++ + S ++ AAE++ + ++V+KI+
Sbjct: 222 PKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAEKQKMREKVQKII 276
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 476 SKSKKDRCSQKKLCDGTDNTFVVINQKGIDPLSLDAFAKEGIIGLRRAKRRNMERLALAC 655
++ +K R +K+ N FV N++ I + FA GI+ + A +ERLAL
Sbjct: 263 AEKQKMREKVQKIIGHGINCFV--NRQLIYNFPEELFADAGILAIEHADFEGIERLALVT 320
Query: 656 GG 661
GG
Sbjct: 321 GG 322
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +3
Query: 312 HGARHPDMPKRVE-NAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVR 488
+ A D PK+VE +L LEY +T++ YKS D ER D+R
Sbjct: 606 NSAVQEDAPKKVEVEKQVLDSREKLEYYRTKMQDLVLYKSRCDNRLNEITERASSDKREV 665
Query: 489 KIVALK--KNYATVLTILSSLSTKKES 563
+ +A K + Y V + S L+ ++ +
Sbjct: 666 ESLAKKYEEKYKQVAELASKLAVEEHA 692
>02_02_0480 +
10799242-10799365,10799748-10800044,10800081-10800248,
10800525-10800805,10800860-10801205,10801425-10801428,
10801533-10801575
Length = 420
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 309 DHGARHPDMPKR--VENAYILTCNVSLEYEKTEVNSGFFYKSAE 434
D A HPD R V +AY L CN+SL+ EK+ + + + E
Sbjct: 175 DFLAWHPDKTGRFSVRSAYSLACNISLDVEKSRFGNEWLFDMLE 218
>09_04_0662 +
19296395-19296532,19296650-19296742,19296976-19297128,
19297213-19297596
Length = 255
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +3
Query: 357 YILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREFIDQRVRKIVALKKNYATVLTIL 536
YIL V+L+Y + GFF S + ++ ++ I + R ++A++ +
Sbjct: 177 YILDNTVALKYLTLDTTRGFFSCSTGEHDRCFPMDKIMITEAKRAVLAIQTYIERKVPST 236
Query: 537 SSLSTKKESTPCH 575
L+ K + CH
Sbjct: 237 VKLNVVKPCSRCH 249
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 31.5 bits (68), Expect = 0.68
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +3
Query: 291 VKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAEREF 470
VKG+V +H M +NA +L +LEY+K ++ E+E
Sbjct: 349 VKGIVCSKNVKHKRMVSEHQNATLLILGGALEYQKVS-------NKLASIGTILEQEKEH 401
Query: 471 IDQRVRKIVALKKNYATVLTILSSLSTKKESTPCHWMLLPKKVLLD 608
+ V KI + + N V +SS + + + +L K+ LLD
Sbjct: 402 LRMIVGKIESRRPNVLLVEKSVSSFAQELLAKDISLVLNVKRPLLD 447
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 31.5 bits (68), Expect = 0.68
Identities = 27/111 (24%), Positives = 49/111 (44%)
Frame = +3
Query: 276 TETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVA 455
+++ LV+G+V +H M NA +L +LEY+K + ++
Sbjct: 327 SDSNLVRGVVCSKNVKHKRMASEHVNAKLLILGGALEYQKVT-------NKLASIDTILE 379
Query: 456 AEREFIDQRVRKIVALKKNYATVLTILSSLSTKKESTPCHWMLLPKKVLLD 608
E+E + V KI + + N V +SS + + + +L K+ LLD
Sbjct: 380 QEKEHLRAIVAKIESRRPNVLLVEKSVSSYAQELLAKDISLVLNVKRPLLD 430
>10_08_0533 + 18592177-18592581,18592674-18593906
Length = 545
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 711 KPKASSVRSSTRVNSGPPPHARARRSILRRFALRS-PIIP 595
KP+ SV + R + PPP R + S+ RR A + P +P
Sbjct: 57 KPQEGSVAAEERASPSPPPPRRKKDSLFRRVAAAADPRLP 96
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/81 (27%), Positives = 34/81 (41%)
Frame = +3
Query: 282 TVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEDREKLVAAE 461
+ +VKG+V H M R+E +L +LEY++ + L+ E
Sbjct: 449 STVVKGVVCKKNVAHRRMTSRIEKPRLLLLAGALEYQRVT-------NQLSSIDTLLQQE 501
Query: 462 REFIDQRVRKIVALKKNYATV 524
+ + V KIVA K N V
Sbjct: 502 TDHLKMAVAKIVAQKPNLLLV 522
>01_06_1480 -
37660591-37660720,37660899-37660930,37661061-37661155,
37661460-37661527,37661608-37661694,37662884-37662912,
37663019-37663138,37663854-37663905,37663986-37664050,
37664174-37664536,37664637-37664711,37664803-37664940,
37665025-37665181,37665471-37665478,37665576-37665710,
37665965-37666082,37666791-37666915,37667571-37667717,
37668297-37668380,37668671-37668800,37669196-37669347,
37669678-37669857,37670660-37670731,37671104-37671295,
37671366-37671411,37671498-37671647,37671725-37671882,
37671995-37672101,37672191-37672407,37672484-37672696,
37672852-37672972,37673072-37673253,37673475-37673672,
37674770-37674967
Length = 1447
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 414 FFYKSAEDREKLVAAEREFIDQRVRKIVALKKNYATVLTILSSLSTKKESTPCHWMLLPK 593
F Y++ E ++ + I +++K+VA + V T+L SL E +P + L K
Sbjct: 776 FCYRARRFCEPYISQQTSKILDKMKKVVAALDDNYNVPTLLQSLGLILEHSPSMYKLYDK 835
Query: 594 KVL 602
K++
Sbjct: 836 KIM 838
>12_02_0591 + 20864861-20867329
Length = 822
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +2
Query: 587 AKEGIIGLRRAKRRNMERLALACGGGPLLT---LVDDLTEDALG 709
A E + L RRN +R+ A GGG T LVD LT+D G
Sbjct: 595 AGEALAMLALDSRRNCDRILRAGGGGGAATVARLVDALTDDEAG 638
>06_01_0905 - 6974369-6974456,6974647-6974777
Length = 72
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 498 ALKKNYATVLTILSSLSTKKESTPCHWMLLP 590
A + T I +S KKES+P HW +LP
Sbjct: 41 ARSMGHGTKGPIPKGISGKKESSPLHWKILP 71
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 1 ISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIARENL 117
I GLHP I G+ A NK++E+LE + +E EN+
Sbjct: 114 IRMGLHPSEIIIGYTKAINKTVEILEDL---VEKGSENM 149
>11_01_0522 - 4103138-4103926
Length = 262
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 705 KASSVRSSTRVNSGPPPHARARRSILRRFALRSPIIPSLAKASS 574
+A ++ + G P HAR+ + A+ SP+ P+LAK ++
Sbjct: 45 RAGAIPFKWEICPGTPKHARSASASAASAAVVSPVPPALAKVAT 88
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 479 KSKKDRCSQKKLCDGTDNTFVVINQKGIDPLSLDAFAKEGIIGLR 613
KSKK RC+ G ++T ++ + + PL+++ I GLR
Sbjct: 799 KSKKGRCTDLSSSLGRESTSEYVSLEDLAPLAMEKIEALSIEGLR 843
>01_05_0616 - 23684400-23685329,23686320-23686336,23687977-23688142
Length = 370
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 596 GIIGLRRAKRRNMERLALACGGGPLLTLVDDLTEDALG 709
G++GL + +R M A GGG L L DL E++ G
Sbjct: 112 GLLGLPPSTKRAMVYQAGCYGGGTALRLAKDLAENSPG 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,269,985
Number of Sequences: 37544
Number of extensions: 358692
Number of successful extensions: 993
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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