Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0308
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   4.1  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    24   4.1  
DQ212034-1|ABB00979.1|  102|Anopheles gambiae defensin protein.        23   9.5  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.5  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 462 REFIDQRVRKIVALKKNYATVLTILSSLSTKKESTPCHWMLLPKKV-LLDYAEQNGAIWN 638
           RE   Q   KIV + K   T    LS+   K+E+T CH +  P  V LL+     G ++ 
Sbjct: 12  RESNQQFAVKIVDVAK--FTASPGLSTSDLKREATICHMLKHPHIVELLETYSSEGMLYM 69

Query: 639 V 641
           V
Sbjct: 70  V 70


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 666 GPPPHARARRSIL 628
           GPP H+R RRSI+
Sbjct: 197 GPPGHSRQRRSIV 209


>DQ212034-1|ABB00979.1|  102|Anopheles gambiae defensin protein.
          Length = 102

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 635 ERLALACGGGPLLTLVDDLTED 700
           E  AL+ GGG L TL+D+L E+
Sbjct: 29  EEAALS-GGGNLNTLLDELPEE 49


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 462 REFIDQRVRKIVALKKNYATVLTILSSLSTKK 557
           R  I+ + ++ VALK+ Y TV   L  +  K+
Sbjct: 367 RADIESKKQEYVALKEAYGTVRRTLQDVQAKQ 398


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,824
Number of Sequences: 2352
Number of extensions: 13655
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)