Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0308
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.18 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   3.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.0  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   6.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 605 GLRRAKRRNMERLALACGGGPLLTLVDDLTEDAL 706
           GL R K+    + A +CGGGP +     L  D +
Sbjct: 354 GLLRVKKEEELQEAPSCGGGPTILTTPGLDSDGI 387


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 270 SCVSSHNFNHVQINRFAWSSNGEYRIN 190
           S +SSHN N+V   +F   + G+++ N
Sbjct: 265 SAMSSHNLNYVNTKQF---TQGKFQAN 288


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 270 SCVSSHNFNHVQINRFAWS 214
           S +SSHN N+V   +F  S
Sbjct: 266 SALSSHNLNYVNTEQFVKS 284


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 552 KKESTPCHWMLLPKKVLLDYAEQNGAIW 635
           KKE  P    L    V  +Y + N  IW
Sbjct: 610 KKEGMPFQLFLYVSPVSSEYNQYNSRIW 637


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 552 KKESTPCHWMLLPKKVLLDYAEQNGAIW 635
           KKE  P    L    V  +Y + N  IW
Sbjct: 610 KKEGMPFQLFLYVSPVSSEYNQYNSRIW 637


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 40  FDIARNKSLEVLESMKIPIEIARE 111
           F  AR ++  V E  ++PIEI R+
Sbjct: 161 FSRAREEANVVPEGARVPIEIPRD 184


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 674 LTADPPRTLGLDVP 633
           L A PPR LG +VP
Sbjct: 13  LPAGPPRLLGWNVP 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,470
Number of Sequences: 438
Number of extensions: 3547
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)