Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0305
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058269-1|AAL13498.1|  185|Drosophila melanogaster GH02075p pro...    90   2e-18
AE014134-125|AAF51482.1|  185|Drosophila melanogaster CG2789-PA ...    90   2e-18

>AY058269-1|AAL13498.1|  185|Drosophila melanogaster GH02075p
           protein.
          Length = 185

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = +2

Query: 242 VKEASWTPPKWVFGPAWTVLYSSMGYASYLIWEECDGFT-EDAVLPLTLYGVQLLLNWSW 418
           +K  S+ PP  VF P W  LY+ MGY SYL+W +  GF  E A LPL  YG QL LNW+W
Sbjct: 42  LKFPSFKPPNSVFAPMWISLYAGMGYGSYLVWRDGGGFAGEAAKLPLIAYGTQLALNWAW 101

Query: 419 TPIFFGLKDFKLAFIEI 469
           TPIFFG  + K   I+I
Sbjct: 102 TPIFFGQHNIKGGLIDI 118



 Score = 58.8 bits (136), Expect = 6e-09
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = +1

Query: 517 VNKTAGLLLIPYLAWLGYASSLSYYIWKNNPKPVKGP 627
           VNKTAGLL +PY+AWLG+A++L+Y IWK NP+  + P
Sbjct: 135 VNKTAGLLFVPYVAWLGFATALNYAIWKLNPEKEQAP 171



 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 144 GSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPAGLP 266
           G++ILPN+GG  NG      +      +SWY  LK P+  P
Sbjct: 15  GAVILPNLGGIYNGRLTRQHL------QSWYANLKFPSFKP 49


>AE014134-125|AAF51482.1|  185|Drosophila melanogaster CG2789-PA
           protein.
          Length = 185

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = +2

Query: 242 VKEASWTPPKWVFGPAWTVLYSSMGYASYLIWEECDGFT-EDAVLPLTLYGVQLLLNWSW 418
           +K  S+ PP  VF P W  LY+ MGY SYL+W +  GF  E A LPL  YG QL LNW+W
Sbjct: 42  LKFPSFKPPNSVFAPMWISLYAGMGYGSYLVWRDGGGFAGEAAKLPLIAYGTQLALNWAW 101

Query: 419 TPIFFGLKDFKLAFIEI 469
           TPIFFG  + K   I+I
Sbjct: 102 TPIFFGQHNIKGGLIDI 118



 Score = 58.8 bits (136), Expect = 6e-09
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = +1

Query: 517 VNKTAGLLLIPYLAWLGYASSLSYYIWKNNPKPVKGP 627
           VNKTAGLL +PY+AWLG+A++L+Y IWK NP+  + P
Sbjct: 135 VNKTAGLLFVPYVAWLGFATALNYAIWKLNPEKEQAP 171



 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 144 GSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPAGLP 266
           G++ILPN+GG  NG      +      +SWY  LK P+  P
Sbjct: 15  GAVILPNLGGIYNGRLTRQHL------QSWYANLKFPSFKP 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,259,261
Number of Sequences: 53049
Number of extensions: 672289
Number of successful extensions: 1516
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)