Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0305
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    25   0.63 
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   7.7  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   7.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.7  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   7.7  

>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +2

Query: 257 WTPPKWVFGPAWTVLYSSMGYASYLIWEECDGF--TEDAVLP 376
           W    ++   AW + Y  M   S L W  C+ +  T++ V P
Sbjct: 72  WMNVYYIVILAWAIFYFFMSMRSELPWGSCNNYWNTKNCVNP 113


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = -2

Query: 323 RHIPCCCREQSKLDQIPTLGES 258
           +H   CCR       + + GES
Sbjct: 53  KHTDACCRTHDMCPDVMSAGES 74


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = -2

Query: 323 RHIPCCCREQSKLDQIPTLGES 258
           +H   CCR       + + GES
Sbjct: 58  KHTDACCRTHDMCPDVMSAGES 79


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 538 LLIPYLAWLGYASS 579
           +L+P L WLG+ +S
Sbjct: 339 ILMPALTWLGWINS 352


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = -2

Query: 323 RHIPCCCREQSKLDQIPTLGES 258
           +H   CCR       + + GES
Sbjct: 58  KHTDACCRTHDMCPDVMSAGES 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,466
Number of Sequences: 438
Number of extensions: 4239
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)