Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0303
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down synd... 33 0.98
AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhe... 33 0.98
AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhe... 33 0.98
AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhe... 33 0.98
AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhe... 33 0.98
AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhe... 33 0.98
AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhe... 33 0.98
AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhe... 33 0.98
AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhe... 33 0.98
AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein. 33 0.98
AK074473-1|BAB85091.1| 178|Homo sapiens protein ( Homo sapiens ... 30 6.9
BC110490-1|AAI10491.1| 622|Homo sapiens IL31RA protein protein. 30 9.1
AY499342-1|AAS86447.1| 662|Homo sapiens interleukin 31RA splice... 30 9.1
AY499341-1|AAS86446.1| 764|Homo sapiens interleukin 31RA splice... 30 9.1
AY499339-1|AAS86444.1| 649|Homo sapiens interleukin 31RA splice... 30 9.1
AY358740-1|AAQ89100.1| 582|Homo sapiens GLM-R protein. 30 9.1
AY358117-1|AAQ88484.1| 732|Homo sapiens GLM-R protein. 30 9.1
AF486620-1|AAM27958.1| 732|Homo sapiens gp130-like monocyte rec... 30 9.1
AF106913-1|AAL36452.1| 509|Homo sapiens CRL3 protein protein. 30 9.1
>AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down
syndrome cell adhesion molecule protein.
Length = 1029
Score = 33.1 bits (72), Expect = 0.98
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 358 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSGKWWALTSSNG 537
Y++Q+ +CNS GC+ + + DGS + PL S+ + + G +T S
Sbjct: 561 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEGLKMLVTIS-- 617
Query: 538 VCIL 549
CIL
Sbjct: 618 -CIL 620
>AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhesion
molecule 2 protein.
Length = 2113
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 301 WSGAGSATSAAF---KVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 471
W G + +S ++++ Y++++ CNS GC +E + D DGS + P+ +
Sbjct: 1585 WQGLRANSSGEVFLTELREATWYELRMRACNSAGC-GNETAQFATLDYDGSTIPPIKSAQ 1643
Query: 472 GE 477
GE
Sbjct: 1644 GE 1645
>AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule DSCAML1 protein.
Length = 2053
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 301 WSGAGSATSAAF---KVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 471
W G + +S ++++ Y++++ CNS GC +E + D DGS + P+ +
Sbjct: 1525 WQGLRANSSGEVFLTELREATWYELRMRACNSAGC-GNETAQFATLDYDGSTIPPIKSAQ 1583
Query: 472 GE 477
GE
Sbjct: 1584 GE 1585
>AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1b protein.
Length = 1842
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 301 WSGAGSATSAAF---KVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 471
W G + +S ++++ Y++++ CNS GC +E + D DGS + P+ +
Sbjct: 1314 WQGLRANSSGEVFLTELREATWYELRMRACNSAGC-GNETAQFATLDYDGSTIPPIKSAQ 1372
Query: 472 GE 477
GE
Sbjct: 1373 GE 1374
>AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1a protein.
Length = 2053
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 301 WSGAGSATSAAF---KVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 471
W G + +S ++++ Y++++ CNS GC +E + D DGS + P+ +
Sbjct: 1525 WQGLRANSSGEVFLTELREATWYELRMRACNSAGC-GNETAQFATLDYDGSTIPPIKSAQ 1583
Query: 472 GE 477
GE
Sbjct: 1584 GE 1585
>AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhesion
molecule splice variant protein.
Length = 1746
Score = 33.1 bits (72), Expect = 0.98
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 358 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSGKWWALTSSNG 537
Y++Q+ +CNS GC+ + + DGS + PL S+ + + G +T S
Sbjct: 1296 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEGLKMLVTIS-- 1352
Query: 538 VCIL 549
CIL
Sbjct: 1353 -CIL 1355
>AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 2012
Score = 33.1 bits (72), Expect = 0.98
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 358 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSGKWWALTSSNG 537
Y++Q+ +CNS GC+ + + DGS + PL S+ + + G +T S
Sbjct: 1544 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEGLKMLVTIS-- 1600
Query: 538 VCIL 549
CIL
Sbjct: 1601 -CIL 1603
>AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 1896
Score = 33.1 bits (72), Expect = 0.98
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 358 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSGKWWALTSSNG 537
Y++Q+ +CNS GC+ + + DGS + PL S+ + + G +T S
Sbjct: 1530 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEGLKMLVTIS-- 1586
Query: 538 VCIL 549
CIL
Sbjct: 1587 -CIL 1589
>AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhesion
molecule isoform CHD2-42 precursor variant protein.
Length = 2023
Score = 33.1 bits (72), Expect = 0.98
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 358 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSGKWWALTSSNG 537
Y++Q+ +CNS GC+ + + DGS + PL S+ + + G +T S
Sbjct: 1555 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEGLKMLVTIS-- 1611
Query: 538 VCIL 549
CIL
Sbjct: 1612 -CIL 1614
>AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein.
Length = 2092
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 301 WSGAGSATSAAF---KVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 471
W G + +S ++++ Y++++ CNS GC +E + D DGS + P+ +
Sbjct: 1564 WQGLRANSSGEVFLTELREATWYELRMRACNSAGC-GNETAQFATLDYDGSTIPPIKSAQ 1622
Query: 472 GE 477
GE
Sbjct: 1623 GE 1624
>AK074473-1|BAB85091.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ23893 fis, clone LNG14589. ).
Length = 178
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 248 WTATRPTSPESCSIRRKSGAVPAAPHR 328
W RPTS + S R +G PA P R
Sbjct: 14 WPTARPTSSTAISARTSAGRTPAGPRR 40
>BC110490-1|AAI10491.1| 622|Homo sapiens IL31RA protein protein.
Length = 622
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 ERTFAIVEVNQAATAYNQLVTKKDAADVSVN-WNV-WTATRPTSPESCS 286
E++F +EV QA A +QLV K ++ + VN W + W + P + S
Sbjct: 213 EKSFQCIEVMQACVAEDQLVVKWQSSALDVNTWMIEWFPDVDSEPTTLS 261
>AY499342-1|AAS86447.1| 662|Homo sapiens interleukin 31RA splice
variant x4 protein.
Length = 662
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 ERTFAIVEVNQAATAYNQLVTKKDAADVSVN-WNV-WTATRPTSPESCS 286
E++F +EV QA A +QLV K ++ + VN W + W + P + S
Sbjct: 336 EKSFQCIEVMQACVAEDQLVVKWQSSALDVNTWMIEWFPDVDSEPTTLS 384
>AY499341-1|AAS86446.1| 764|Homo sapiens interleukin 31RA splice
variant x3 protein.
Length = 764
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 ERTFAIVEVNQAATAYNQLVTKKDAADVSVN-WNV-WTATRPTSPESCS 286
E++F +EV QA A +QLV K ++ + VN W + W + P + S
Sbjct: 355 EKSFQCIEVMQACVAEDQLVVKWQSSALDVNTWMIEWFPDVDSEPTTLS 403
>AY499339-1|AAS86444.1| 649|Homo sapiens interleukin 31RA splice
variant x1 protein.
Length = 649
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 ERTFAIVEVNQAATAYNQLVTKKDAADVSVN-WNV-WTATRPTSPESCS 286
E++F +EV QA A +QLV K ++ + VN W + W + P + S
Sbjct: 323 EKSFQCIEVMQACVAEDQLVVKWQSSALDVNTWMIEWFPDVDSEPTTLS 371
>AY358740-1|AAQ89100.1| 582|Homo sapiens GLM-R protein.
Length = 582
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 ERTFAIVEVNQAATAYNQLVTKKDAADVSVN-WNV-WTATRPTSPESCS 286
E++F +EV QA A +QLV K ++ + VN W + W + P + S
Sbjct: 355 EKSFQCIEVMQACVAEDQLVVKWQSSALDVNTWMIEWFPDVDSEPTTLS 403
>AY358117-1|AAQ88484.1| 732|Homo sapiens GLM-R protein.
Length = 732
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 ERTFAIVEVNQAATAYNQLVTKKDAADVSVN-WNV-WTATRPTSPESCS 286
E++F +EV QA A +QLV K ++ + VN W + W + P + S
Sbjct: 323 EKSFQCIEVMQACVAEDQLVVKWQSSALDVNTWMIEWFPDVDSEPTTLS 371
>AF486620-1|AAM27958.1| 732|Homo sapiens gp130-like monocyte
receptor protein.
Length = 732
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 ERTFAIVEVNQAATAYNQLVTKKDAADVSVN-WNV-WTATRPTSPESCS 286
E++F +EV QA A +QLV K ++ + VN W + W + P + S
Sbjct: 323 EKSFQCIEVMQACVAEDQLVVKWQSSALDVNTWMIEWFPDVDSEPTTLS 371
>AF106913-1|AAL36452.1| 509|Homo sapiens CRL3 protein protein.
Length = 509
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 ERTFAIVEVNQAATAYNQLVTKKDAADVSVN-WNV-WTATRPTSPESCS 286
E++F +EV QA A +QLV K ++ + VN W + W + P + S
Sbjct: 336 EKSFQCIEVMQACVAEDQLVVKWQSSALDVNTWMIEWFPDVDSEPTTLS 384
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,033,411
Number of Sequences: 237096
Number of extensions: 2022868
Number of successful extensions: 4864
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4863
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -