Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0302
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.46 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.46 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.46 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.6  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 447 STQVEYCV-FPLSDNRWRCTSRLSRCYKI 530
           STQ ++ V +   ++RW CT  L R Y++
Sbjct: 566 STQAKHYVQYDQGEDRWLCTLLLQRGYRV 594


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 447 STQVEYCV-FPLSDNRWRCTSRLSRCYKI 530
           STQ ++ V +   ++RW CT  L R Y++
Sbjct: 799 STQAKHYVQYDQGEDRWLCTLLLQRGYRV 827


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 447 STQVEYCV-FPLSDNRWRCTSRLSRCYKI 530
           STQ ++ V +   ++RW CT  L R Y++
Sbjct: 799 STQAKHYVQYDQGEDRWLCTLLLQRGYRV 827


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 462 YCVFPLSDNRWRCTSRLSRCYKI 530
           Y  +   ++RW CT  L R Y++
Sbjct: 832 YVQYDQGEDRWLCTLLLQRGYRV 854


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 462 YCVFPLSDNRWRCTSRLSRCYKI 530
           Y  +   ++RW CT  L R Y++
Sbjct: 832 YVQYDQGEDRWLCTLLLQRGYRV 854


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 462 YCVFPLSDNRWRCTSRLSRCYKI 530
           Y  +   ++RW CT  L R Y++
Sbjct: 832 YVQYDQGEDRWLCTLLLQRGYRV 854


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 462 YCVFPLSDNRWRCTSRLSRCYKI 530
           Y  +   ++RW CT  L R Y++
Sbjct: 832 YVQYDQGEDRWLCTLLLQRGYRV 854


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 600 INTGTGLIY*SFGYEWRCSN 659
           I+ GT LIY  F +  RC N
Sbjct: 685 IHVGTQLIYRPFSHFPRCGN 704


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 293 LYFAGILFIPNPSRNTMIYCIL 228
           LYF+ I+F  N + N ++Y I+
Sbjct: 335 LYFSRIMFHINSAVNPILYNII 356


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,444
Number of Sequences: 336
Number of extensions: 3417
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)