Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0302
         (717 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921     29   3.7  
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278...    29   4.9  
07_01_0584 + 4345134-4345237,4346165-4346267,4346397-4346466,434...    28   6.4  
03_05_0062 + 20370608-20370977,20371062-20371541,20371661-203717...    28   6.4  
12_01_1092 - 11362094-11362367,11362739-11362795,11363256-113636...    28   8.5  

>09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921
          Length = 264

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 489 RWRCTSRLSRCYKILRYSFDYTSIDGVTLRRN 584
           RW+ T +L R Y  LR+S+D   +D   LRR+
Sbjct: 89  RWK-TKQLERDYAALRHSYDSLRLDHDALRRD 119


>10_07_0176 -
           13826764-13827064,13827271-13827377,13827474-13827836,
           13827912-13828079,13828153-13828374,13828784-13829023,
           13829640-13829719,13829853-13830018,13830720-13830783,
           13830861-13830962,13831085-13831227,13831370-13831474,
           13831551-13831706,13832125-13832241,13832315-13832392,
           13832466-13832550,13833334-13833455,13833546-13833611,
           13835190-13835284,13835427-13835523,13835873-13835983,
           13836083-13836164,13836292-13836353,13836620-13836685,
           13838002-13838232
          Length = 1142

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 8   LQSKREFSYLIVAFILLTSCLVIHTDVVWKYLKLCSLVNIVF 133
           +Q+     + I  F  LT  L++H    W YL+LC ++   F
Sbjct: 797 MQAVMASDFAIAQFRYLTDLLLVHGR--WSYLRLCKVITYFF 836


>07_01_0584 +
           4345134-4345237,4346165-4346267,4346397-4346466,
           4346552-4346590,4346684-4346801,4346894-4346951,
           4347031-4347095,4347281-4347341,4347678-4347779,
           4348005-4348070,4348399-4348443,4348540-4348797,
           4349289-4349501,4350103-4350411,4350461-4350613
          Length = 587

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 229 CIIIMVCGCLFRMPRLDNTNKKVLA 155
           C   ++  CL  +PR   TN+K++A
Sbjct: 543 CCCAIIFSCLLALPRCQETNRKIIA 567


>03_05_0062 +
           20370608-20370977,20371062-20371541,20371661-20371731,
           20371836-20371912,20372076-20372223,20372346-20372507,
           20372743-20372940
          Length = 501

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +1

Query: 340 LVKLFRFE*FRLLSDCVPSLQRFYSRGENPRIVENIPHKSSIACFRY 480
           LV     + FR L+D  P+L+R YS+ E  R+VE     ++ AC RY
Sbjct: 387 LVDALETDDFRELAD--PALERRYSKSEMRRMVE-----AAAACIRY 426


>12_01_1092 -
           11362094-11362367,11362739-11362795,11363256-11363683,
           11364350-11365462
          Length = 623

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 325 TNTLKLVKLFRFE*FRLLSDCVPSLQ 402
           TN  K +KL RFE F+ LSDC+  L+
Sbjct: 77  TNIWKFIKLRRFETFQ-LSDCIGDLK 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,772,049
Number of Sequences: 37544
Number of extensions: 309538
Number of successful extensions: 629
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)