Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0300
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   1.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   3.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.3  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 428 LKSYPKVTVEVCGSSKVNM 484
           LK YP   ++VCG+  VN+
Sbjct: 64  LKYYPIYKLDVCGTGGVNL 82


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 428 LKSYPKVTVEVCGSSKVNM 484
           LK YP   ++VCG+  VN+
Sbjct: 64  LKYYPIYKLDVCGNGGVNL 82


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 171 TVHNVT-VSGCEESSSHCILKRNTDATIGCSLHHC 272
           T +N++ +S C+ +    I K+N  A   C L  C
Sbjct: 32  TYNNISSISECKNNGECVINKKNRTACKACRLRKC 66


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 292 YRSSRGHHEHPDTVPP 339
           Y SS+ HH H    PP
Sbjct: 48  YASSQHHHHHLQARPP 63


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2

Query: 440 PKVTVEVCG 466
           PKVT+E+CG
Sbjct: 312 PKVTLELCG 320


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 524 LDQFSVIRTQTKSPCSLWSSHI 459
           L  F  +   + +P  LW+SH+
Sbjct: 420 LAAFDFVARNSDTPIILWTSHL 441


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 79   CQQKCCFSSLRRCSWPVL 132
            C  +C F S  R  W VL
Sbjct: 1111 CSNRCFFPSKIRICWNVL 1128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,186
Number of Sequences: 336
Number of extensions: 3139
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)