Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0300
         (622 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0171 + 1446221-1446902,1447040-1447221,1447339-1447409,144...    30   1.3  
08_02_0685 + 20039318-20040433,20040574-20040982,20042906-200429...    29   3.9  
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    29   3.9  
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117...    27   9.1  

>01_01_0171 +
           1446221-1446902,1447040-1447221,1447339-1447409,
           1447480-1447486,1447530-1447619,1447694-1447981,
           1448121-1448333,1448860-1449087
          Length = 586

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 430 EVLS*GDSGSMWELQSEHGDLVCVLIT 510
           E+LS  D G + EL+ EHG+ +C ++T
Sbjct: 512 EILS-EDDGKLCELKEEHGEEICAMVT 537


>08_02_0685 +
           20039318-20040433,20040574-20040982,20042906-20042973,
           20043336-20043518,20043641-20043964,20045653-20045694
          Length = 713

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 183 VTVSGCEESSSHCILKRNTDATIGCSLHHCTTSIA 287
           V +S C     HC+L  ++ A   C+  +CT ++A
Sbjct: 532 VILSSCRCCHRHCLLLADSPAYCACAKSNCTIAVA 566


>07_03_1530 +
           27502546-27502671,27503487-27503561,27504670-27504746,
           27505576-27507522,27508478-27508946,27509898-27510079,
           27510746-27511208,27511295-27511691,27511810-27511937,
           27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 272 HNIDRINTEVHGVIMNIPIPFPLPESDACKDNGL 373
           H++D  + E H ++ +IP   PL   +AC  N L
Sbjct: 585 HSLDTPDGEKHILLKDIPSTIPLDLKNACSQNSL 618


>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
            1171148-1171398,1171442-1171687,1172220-1172415,
            1172796-1172876,1172966-1173169,1173671-1173880,
            1173953-1174174,1174437-1174480,1174974-1175052,
            1175066-1175227,1175337-1175564,1175786-1175815,
            1175905-1176273,1176356-1176571,1177202-1177683,
            1177930-1177975
          Length = 1352

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 262  YTTAQHRSHKYRSSRGHHEHPDTVPPAGV*RVQGQRA 372
            + T  HR H +R    HH+H  +  P    R  GQ+A
Sbjct: 1310 HKTGHHRHH-HRHHHHHHDHRSSSEPNDKKRQDGQKA 1345


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,980,408
Number of Sequences: 37544
Number of extensions: 370181
Number of successful extensions: 1101
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)