Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0299
         (478 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   2.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   4.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.7  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   7.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 104  NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 226
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 334 VFGQSGAGNNW-AKGHYTEGAELDDSVLDVVRKEAESCDCLQG 459
           +  + G  N + A+  Y  G+E   S++ +   +  +C C  G
Sbjct: 839 ILAEGGCPNLYDARKPYVNGSEYHPSIVSLGEYKCVTCKCENG 881


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 403 DSVLDVVRKEAESCDCLQGF 462
           D V    RK AE C  LQGF
Sbjct: 233 DVVASNSRKTAEMCYKLQGF 252


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 192 CKSESPW*APVGSMPC 145
           C +E PW    G  PC
Sbjct: 351 CVNERPWSLYCGEPPC 366


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 255 PRRLGARHHG 284
           P+RL  RHHG
Sbjct: 21  PQRLRIRHHG 30


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 38  IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEI 133
           I +  + N+++  V I    C N   A+F+E+
Sbjct: 283 IEAKRRDNEIKMFVKIVDASCRNFTAARFFEL 314


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 239 YVPRATSSTWSPA 277
           Y   A SS WSPA
Sbjct: 210 YTNSANSSIWSPA 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,671
Number of Sequences: 336
Number of extensions: 2446
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)