Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0299
(478 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 151 3e-37
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 151 3e-37
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 150 7e-37
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 149 2e-36
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 149 2e-36
03_01_0034 + 318432-318825,318902-319851 146 6e-36
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 139 9e-34
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 133 8e-32
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 78 3e-15
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 77 7e-15
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 76 2e-14
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 76 2e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 62 2e-10
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 35 0.039
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 33 0.090
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 33 0.12
06_03_1144 - 27980216-27980896,27981682-27982048,27983499-279836... 32 0.21
10_01_0300 - 3257584-3258825 32 0.28
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 31 0.48
08_02_0235 + 14627648-14628889 31 0.48
08_01_0749 + 7063297-7064370 31 0.48
07_01_1086 - 9930311-9931993 31 0.48
05_03_0216 + 10370531-10371922,10378656-10378808 31 0.48
04_01_0187 - 2153546-2154520,2154581-2155858 31 0.48
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 30 1.1
10_04_0010 - 7487455-7489490,7489569-7489980 30 1.1
10_02_0174 - 6202334-6204922 30 1.1
03_02_1029 - 13488535-13493037 30 1.1
04_04_0178 - 23337801-23337896,23337999-23338067,23338171-233382... 29 2.6
02_04_0648 - 24716249-24717841 28 3.4
02_02_0653 - 12655787-12656311 28 3.4
04_04_1351 - 32827136-32827984 28 4.5
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 27 5.9
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 27 5.9
05_04_0277 + 19684956-19686137 27 7.8
01_03_0145 - 13116302-13116958,13117365-13117430,13117786-131180... 27 7.8
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 151 bits (366), Expect = 3e-37
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
L+DLEPGTMDSVRSGPFGQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 65 LMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
E+CDCLQGFQ+ HS
Sbjct: 125 ENCDCLQGFQVCHS 138
Score = 126 bits (303), Expect = 1e-29
Identities = 55/70 (78%), Positives = 59/70 (84%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE+I DEHG+D TG Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 245 PRATSSTWSP 274
PRA P
Sbjct: 61 PRAVLMDLEP 70
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 151 bits (366), Expect = 3e-37
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
L+DLEPGTMDSVRSGPFGQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 65 LMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
E+CDCLQGFQ+ HS
Sbjct: 125 ENCDCLQGFQVCHS 138
Score = 124 bits (300), Expect = 3e-29
Identities = 55/70 (78%), Positives = 59/70 (84%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDSDLQLERINVYYNEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 245 PRATSSTWSP 274
PRA P
Sbjct: 61 PRAVLMDLEP 70
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 150 bits (363), Expect = 7e-37
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
L+DLEPGTMDSVRSGP+GQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
E+CDCLQGFQ+ HS
Sbjct: 125 ENCDCLQGFQVCHS 138
Score = 126 bits (304), Expect = 9e-30
Identities = 56/70 (80%), Positives = 59/70 (84%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 245 PRATSSTWSP 274
PRA P
Sbjct: 61 PRAVLMDLEP 70
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 149 bits (360), Expect = 2e-36
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
L+DLEPGTMDSVR+GP+GQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 245 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 304
Query: 436 ESCDCLQGFQLTHS 477
E+CDCLQGFQ+ HS
Sbjct: 305 ENCDCLQGFQVCHS 318
Score = 121 bits (292), Expect = 3e-28
Identities = 52/71 (73%), Positives = 59/71 (83%)
Frame = +2
Query: 62 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKY 241
KMREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 242 VPRATSSTWSP 274
VPRA P
Sbjct: 240 VPRAVLMDLEP 250
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 149 bits (360), Expect = 2e-36
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
L+DLEPGTMDSVR+GP+GQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
E+CDCLQGFQ+ HS
Sbjct: 125 ENCDCLQGFQVCHS 138
Score = 119 bits (286), Expect = 1e-27
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 245 PRATSSTWSP 274
PRA P
Sbjct: 61 PRAVLMDLEP 70
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 146 bits (355), Expect = 6e-36
Identities = 65/74 (87%), Positives = 70/74 (94%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
L+DLEPGTMDSVRSGP+G IFRPD FVFGQSGAGNNWAKGHYTEGAEL D+VLDVVRKEA
Sbjct: 65 LMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
E+CDCLQGFQ+ HS
Sbjct: 125 ENCDCLQGFQVCHS 138
Score = 117 bits (282), Expect = 4e-27
Identities = 51/70 (72%), Positives = 57/70 (81%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y GDSDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 245 PRATSSTWSP 274
PRA P
Sbjct: 61 PRAVLMDLEP 70
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 139 bits (337), Expect = 9e-34
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
L+DLEPGTMDSVR+GP+GQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 436 ESCDCLQG 459
E+CDCLQG
Sbjct: 125 ENCDCLQG 132
Score = 121 bits (292), Expect = 3e-28
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 245 PRATSSTWSP 274
PRA P
Sbjct: 61 PRAVLMDLEP 70
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 133 bits (321), Expect = 8e-32
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
L+DLEPGTMDS+RSGP G IFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 65 LMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 436 ESCDCLQ 456
E+CDCLQ
Sbjct: 125 ENCDCLQ 131
Score = 115 bits (276), Expect = 2e-26
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE+I EHG+DPTG Y G S QLERINVY+NEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 245 PRATSSTWSP 274
PRA P
Sbjct: 61 PRAVLMDLEP 70
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 78.2 bits (184), Expect = 3e-15
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ D LD V
Sbjct: 63 PRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122
Query: 424 RKEAESCDCLQGF 462
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MREI+ I GQ G Q+G WE+ EHGI+P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 239 YVPRA 253
+VPRA
Sbjct: 61 HVPRA 65
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 77.0 bits (181), Expect = 7e-15
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ D LD +RK A+
Sbjct: 68 VDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 439 SCDCLQGF 462
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRA 253
+VPRA
Sbjct: 61 HVPRA 65
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 75.8 bits (178), Expect = 2e-14
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ D LD +RK A+
Sbjct: 68 VDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 439 SCDCLQGF 462
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 50.4 bits (115), Expect = 7e-07
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRA 253
+VPRA
Sbjct: 61 HVPRA 65
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 75.8 bits (178), Expect = 2e-14
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR L VDLEP +D V++GP+ Q+F P+ + + A NN+A+GHYT G E+ D LD +
Sbjct: 123 PRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLDRL 182
Query: 424 RKEAESCDCLQGF 462
RK A++C LQGF
Sbjct: 183 RKLADNCTGLQGF 195
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS 184
MREI+ I GQ G Q+G WE+ EHGI P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPD-IFVFGQSG-AGNNWAKGHYTEGAELDDSVLDVVRK 429
LVDLEP ++ +++ + ++ + IFV G AGNNWA G Y +G ++ D ++D++ +
Sbjct: 66 LVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMIDR 124
Query: 430 EAESCDCLQGFQLTHS 477
EA+ D L+GF L HS
Sbjct: 125 EADGSDSLEGFVLCHS 140
Score = 58.8 bits (136), Expect = 2e-09
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 247
REI+ IQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 248 RA 253
RA
Sbjct: 63 RA 64
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 34.7 bits (76), Expect = 0.039
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 255 PRRLGARHHGLCPLWTFRTDL-PSGHLCLRTVRRRQ-QLGQGTLHGGC*ARRFSLRRRS 425
PR + H + P W +T + P+G LC+ T RQ +L G++ R +L +RS
Sbjct: 2196 PRSITTAHQSVVPSWDLQTGVEPTGALCMETTHERQSELPSGSMQERSAETRANLVQRS 2254
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 33.5 bits (73), Expect = 0.090
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q +KFW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q +KFW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>06_03_1144 -
27980216-27980896,27981682-27982048,27983499-27983644,
27983872-27984111
Length = 477
Score = 32.3 bits (70), Expect = 0.21
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +3
Query: 246 PAPPRRLGARHHGLCPLWTFRTDLPSGHLCLRTVRRRQQLGQGTLHGGC*ARRFSLRRRS 425
PA HH L P W H V RR Q+G+ + G R S+RR S
Sbjct: 44 PAGAAAAAGHHHSLSPAWVPSPSSRHAHHARELVNRRVQVGR--MEAGLVQARVSIRRAS 101
Query: 426 K 428
+
Sbjct: 102 R 102
>10_01_0300 - 3257584-3258825
Length = 413
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 289 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 326
>08_02_0235 + 14627648-14628889
Length = 413
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 158
>08_01_0749 + 7063297-7064370
Length = 357
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q +KFW+ + E G ++ + AYH +D Q ER+N
Sbjct: 65 GSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERVN 102
>07_01_1086 - 9930311-9931993
Length = 560
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 268 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 305
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 254 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 291
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 504 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 541
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 406 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 443
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 568 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 605
>10_02_0174 - 6202334-6204922
Length = 862
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 204 SMYTTMKPPAASTCPAPPRRLGARHHGLCPLWT 302
S TT+ PPA S+ P P L RH C W+
Sbjct: 19 SRVTTLPPPAPSSPPHPIPPLSFRHLSPCARWS 51
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 101 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 208
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 1208 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 1245
>04_04_0178 -
23337801-23337896,23337999-23338067,23338171-23338253,
23338694-23338772,23338956-23339120,23339230-23339274,
23339370-23339444,23340135-23340311,23340398-23340721,
23340829-23340897
Length = 393
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -1
Query: 256 GGAGHVLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDL 128
G G +A G IVV L + V GV AVLVG+ L
Sbjct: 327 GERGQTIAQKGIIVVGESGLFTPDHISFVQNAGVKAVLVGESL 369
>02_04_0648 - 24716249-24717841
Length = 530
Score = 28.3 bits (60), Expect = 3.4
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 113 GAKFWEIISDEHGIDPTGAYHG 178
G +++E++ DEHGI+P ++G
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYG 387
>02_02_0653 - 12655787-12656311
Length = 174
Score = 28.3 bits (60), Expect = 3.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 421 RRLRLNRRAQHPPCSVPW 368
R + ++ QHPPC++PW
Sbjct: 10 RSIAQQQQQQHPPCNLPW 27
>04_04_1351 - 32827136-32827984
Length = 282
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 356 PAPDCPKTKMSGRKICPKGPERTESM-VPGSKST 258
P+P PK + GRK CP P T S P S T
Sbjct: 170 PSPSPPK-RHGGRKACPPSPTPTPSTPTPSSSDT 202
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 154
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 154
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>05_04_0277 + 19684956-19686137
Length = 393
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 207 MYTTMKPPAASTCPAPPRRLGARHHGLCPLW 299
MY M PP + CP R CP W
Sbjct: 361 MYNCMVPPVYAPCPLKAGSTNTRPADQCPEW 391
>01_03_0145 -
13116302-13116958,13117365-13117430,13117786-13118065,
13118283-13119028
Length = 582
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 371 LAQLLPAPDCPKTKMSGRKICPKGPERTESMVPGSKST 258
L QL P+P CP + I P G + M S+ T
Sbjct: 442 LPQLCPSPTCPSLAKKQKSIHPDGKRVAKVMFASSEIT 479
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,845,904
Number of Sequences: 37544
Number of extensions: 360085
Number of successful extensions: 1380
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -