Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0299
(478 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 157 4e-39
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 157 4e-39
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 156 8e-39
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 156 1e-38
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 9e-33
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 122 1e-28
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 84 5e-17
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 84 7e-17
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 83 9e-17
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 2e-16
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 81 3e-16
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 4e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 5e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 72 3e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 71 6e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 66 1e-11
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 56 1e-08
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 49 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 48 5e-06
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 38 0.006
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 37 0.010
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 36 0.017
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.091
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 31 0.64
SB_47904| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.85
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 2.0
SB_22843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_18146| Best HMM Match : Pkinase (HMM E-Value=0) 28 3.4
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 157 bits (381), Expect = 4e-39
Identities = 72/74 (97%), Positives = 72/74 (97%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMDSVRSGPFGQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
ESCDCLQGFQLTHS
Sbjct: 125 ESCDCLQGFQLTHS 138
Score = 136 bits (329), Expect = 9e-33
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 157 bits (381), Expect = 4e-39
Identities = 72/74 (97%), Positives = 72/74 (97%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMDSVRSGPFGQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 337
Query: 436 ESCDCLQGFQLTHS 477
ESCDCLQGFQLTHS
Sbjct: 338 ESCDCLQGFQLTHS 351
Score = 141 bits (342), Expect = 2e-34
Identities = 63/72 (87%), Positives = 66/72 (91%)
Frame = +2
Query: 38 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 217
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 218 NEASGGKYVPRA 253
NEA+GGKYVPRA
Sbjct: 265 NEATGGKYVPRA 276
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 156 bits (379), Expect = 8e-39
Identities = 71/74 (95%), Positives = 72/74 (97%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMDSVRSGPFGQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69
Query: 436 ESCDCLQGFQLTHS 477
ESCDC+QGFQLTHS
Sbjct: 70 ESCDCIQGFQLTHS 83
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 156 bits (378), Expect = 1e-38
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
L+DLEPGTMDSVRSGPFGQIFRPD FVFGQSGAGNNWAKGHYTEGAEL DSVLDVVRKEA
Sbjct: 65 LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
ESCDC+QGFQLTHS
Sbjct: 125 ESCDCIQGFQLTHS 138
Score = 132 bits (320), Expect = 1e-31
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 PRA 253
PR+
Sbjct: 61 PRS 63
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 136 bits (329), Expect = 9e-33
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
Score = 60.5 bits (140), Expect = 7e-10
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVF 339
LVDLEPGTMDSVRSGPFGQIFRPD FVF
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 122 bits (295), Expect = 1e-28
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMD+VR GP G +FRPD FV QSGA NNWAKGHY+EGAEL D++ DV+RKEA
Sbjct: 21 LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEA 80
Query: 436 ESCDCLQGFQL 468
E+CDC+QG QL
Sbjct: 81 ENCDCMQGVQL 91
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 84.2 bits (199), Expect = 5e-17
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL D VLD +RK A+
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Query: 439 SCDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 713 QCTGLQGFLIFHS 725
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ D VLD +RK A+
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Query: 439 SCDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 192 QCTGLQGFLIFHS 204
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 239 YVPRA 253
+VPRA
Sbjct: 646 HVPRA 650
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 242 VPRA 253
VPRA
Sbjct: 574 VPRA 577
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 242 VPRA 253
VPRA
Sbjct: 126 VPRA 129
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 83.8 bits (198), Expect = 7e-17
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+ D VLD +RK A+
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Query: 439 SCDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 128 QCTGLQGFLIFHS 140
Score = 83.4 bits (197), Expect = 9e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ D VLD +RK A+
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Query: 439 SCDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 561 QCTGLQGFLIFHS 573
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 239 YVPRA 253
+VPRA
Sbjct: 61 HVPRA 65
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 242 VPRA 253
VPRA
Sbjct: 495 VPRA 498
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 83.4 bits (197), Expect = 9e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ D VLD +RK A+
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 126
Query: 439 SCDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 127 QCTGLQGFLIFHS 139
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 242 VPRA 253
VPRA
Sbjct: 61 VPRA 64
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +1
Query: 262 DLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAES 441
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ D+VLD +RK A+
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 442 CDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 129 CTGLQGFLIFHS 140
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 239 YVPRATSSTWSP 274
+VPRA P
Sbjct: 61 HVPRAVFCDLEP 72
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +1
Query: 262 DLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAES 441
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ D VLD +RK A+
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQ 932
Query: 442 CDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 933 CTGLQGFLIFHS 944
Score = 81.0 bits (191), Expect = 5e-16
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E D VLD +RK A+
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLAD 498
Query: 439 SCDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 499 GCTGLQGFLIFHS 511
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 242 VPRATSSTWSP 274
VPRA + P
Sbjct: 866 VPRAVFADLEP 876
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 242 VPRA 253
VPRA
Sbjct: 433 VPRA 436
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/73 (47%), Positives = 50/73 (68%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + D+VLD +RK A+
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Query: 439 SCDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 546 QCSGLQGFLVFHS 558
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +1
Query: 262 DLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAES 441
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L + VLD +RK A+
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 442 CDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 114 CTGLQGFLIFHS 125
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 242 VPRATSSTWSPA 277
VPRA P+
Sbjct: 480 VPRAVFVDLEPS 491
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 110 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRATSSTWSP 274
+G WE+ EHGI P G D + + N +++E GK+VPRA P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 81.4 bits (192), Expect = 3e-16
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ D VLD RK A+
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Query: 439 SCDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 128 QCTGLQGFLIFHS 140
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 239 YVPRA 253
+VPRA
Sbjct: 61 HVPRA 65
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 78.6 bits (185), Expect = 2e-15
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = +1
Query: 259 VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAE 438
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E D LD +RK A+
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 92
Query: 439 SCDCLQGFQLTHS 477
C LQGF + HS
Sbjct: 93 QCTGLQGFLIFHS 105
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 77.8 bits (183), Expect = 4e-15
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+ + V+D +RK
Sbjct: 978 LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMT 1037
Query: 436 ESCDCLQGFQLTHS 477
+ C LQGF + HS
Sbjct: 1038 DQCSGLQGFLIFHS 1051
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 74.1 bits (174), Expect = 5e-14
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +1
Query: 283 DSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAESCDCLQGF 462
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 463 QLTHS 477
+ HS
Sbjct: 73 LIFHS 77
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 71.7 bits (168), Expect = 3e-13
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +1
Query: 289 VRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAESCDCLQGFQL 468
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 469 THS 477
HS
Sbjct: 63 FHS 65
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 70.5 bits (165), Expect = 6e-13
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1
Query: 343 QSGAGNNWAKGHYTEGAELDDSVLDVVRKEAESCDCLQGFQLTHS 477
Q+ A NNWAKG YTEGAEL DS +D +RK AE+CD +QGFQ+ HS
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHS 46
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 66.1 bits (154), Expect = 1e-11
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = +1
Query: 289 VRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAESCDCLQGFQL 468
+R+G + Q+F P+ + G+ A NN+A+GHYT G E D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 469 THS 477
HS
Sbjct: 63 FHS 65
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 238
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 239 YVPRATSSTWSPA 277
+VPRA P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 56.0 bits (129), Expect = 1e-08
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +1
Query: 322 PDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAESCDCLQGFQLTHS 477
P+ + G+ A NN+A+GHYT G + D VLD +RK A+ C LQGF + HS
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFHS 130
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 239 YVPRATSSTWSPAPWTLS 292
+VPRA P LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 56.0 bits (129), Expect = 1e-08
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +1
Query: 289 VRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRK 429
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 289 VRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRK 429
VR G + +F PD + G+ A NN+A+GHYT G E D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 232
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 233 GKYVPRAT 256
GK+ + T
Sbjct: 254 GKHADQCT 261
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 47.6 bits (108), Expect = 5e-06
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 349 GAGNNWAKGHYTEGAELDDSVLDVVRKEAESCDCLQGF 462
G+GNNWA G G + D VLD+V++E E CD L GF
Sbjct: 104 GSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.21
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 74 IVHIQAGQCGNQIGAKFWEIISDE 145
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 122 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 223
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 37.5 bits (83), Expect = 0.006
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = +1
Query: 259 VDLEPGTMDSVR--SGPFGQIFRPDIFVFGQSGAGNNWAKGHYTE-----GAELDDSVLD 417
VD E + S R G GQ R + G+ G GNN+A G++ G L +D
Sbjct: 44 VDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMD 102
Query: 418 VVRKEAESCDCLQGFQLTHS 477
+RKE E CD G + HS
Sbjct: 103 AMRKEVERCDSFAGTIVMHS 122
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 232 RQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNW 366
+ ++A L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 421 VRKEAESCDCLQGFQLTHS 477
+RKEAE CD +QGFQL HS
Sbjct: 1 MRKEAEDCDAIQGFQLLHS 19
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.5 bits (73), Expect = 0.091
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -2
Query: 459 SLEAITRFRFLSNDV*D*IVELSTLRVVSLGPVVAGAGLSEDKDVRTEDLSERSRADRVH 280
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 279 GAGL 268
G+
Sbjct: 264 RCGI 267
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP KM +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 30.3 bits (65), Expect = 0.85
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L AP CP +M +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 29 CPLKKMLNTPLCPLKEMLNTPLCP 52
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 377 CPLAQLLPAPDCPKTKMSGRKICP 306
CPL ++L P CP +M +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_47904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 367 AKGHYTEGAELDDSVLDVVRKEAESCDCLQ-GFQLTH 474
A+G E LD +V ++ KE E C CL+ G +L H
Sbjct: 74 AQGFDEEALALDSTVKELQHKEKEMCQCLECGKELQH 110
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 353 APDCPKTKMSGRKICPKGPERTESMVPGSKST 258
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_22843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1138
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 345 LSEDKDVRTEDLSERSRADRVHGAGLQVDEVARGTYLPPEASL*YTLMRSNCKSE 181
LSEDK+V ++ L + G + E+ +GTY +S +++ + +CK E
Sbjct: 307 LSEDKEVTSKSLDMSESQENTQGKVPEEKEIKQGTY--TFSSKPHSINQVSCKKE 359
>SB_18146| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 888
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 345 LSEDKDVRTEDLSERSRADRVHGAGLQVDEVARGTYLPPEASL*YTLMRSNCKSE 181
LSEDK+V ++ L + G + E+ +GTY +S +++ + +CK E
Sbjct: 307 LSEDKEVTSKSLDMSESQENTQGKVPEEKEIKQGTY--TFSSKPHSINQVSCKKE 359
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 220 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 119
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,670,983
Number of Sequences: 59808
Number of extensions: 342915
Number of successful extensions: 940
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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