Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0299
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 153 5e-38
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 153 6e-38
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 153 6e-38
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 153 6e-38
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 150 6e-37
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 150 6e-37
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 97 6e-21
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 97 6e-21
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 83 1e-16
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 83 1e-16
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 83 1e-16
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 83 1e-16
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 82 2e-16
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 81 4e-16
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 81 4e-16
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 80 9e-16
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 79 2e-15
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 79 2e-15
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 79 2e-15
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 79 2e-15
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 77 5e-15
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 74 6e-14
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 74 6e-14
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 62 3e-10
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 62 3e-10
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 29 2.3
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 29 2.3
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 29 2.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 3.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 3.0
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 4.0
Z67734-3|CAA91529.2| 1050|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF024491-2|AAT92081.1| 765|Caenorhabditis elegans Hypothetical ... 27 9.2
AF024491-1|AAB70312.2| 850|Caenorhabditis elegans Hypothetical ... 27 9.2
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 27 9.2
AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 153 bits (372), Expect = 5e-38
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMDSVRSGPFGQ+FRPD FVFGQSGAGNNWAKGHYTEGAEL D+VLDVVRKEA
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
E CDCLQGFQLTHS
Sbjct: 125 EGCDCLQGFQLTHS 138
Score = 128 bits (308), Expect = 3e-30
Identities = 55/63 (87%), Positives = 59/63 (93%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 153 bits (371), Expect = 6e-38
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMDSVRSGPFGQ+FRPD FVFGQSGAGNNWAKGHYTEGAEL D+VLDV+RKEA
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
E CDCLQGFQLTHS
Sbjct: 125 EGCDCLQGFQLTHS 138
Score = 120 bits (290), Expect = 4e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 153 bits (371), Expect = 6e-38
Identities = 68/74 (91%), Positives = 72/74 (97%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMDSVR+GPFGQ+FRPD FVFGQSGAGNNWAKGHYTEGAEL D+VLDVVRKEA
Sbjct: 65 LVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
ESCDCLQGFQ+THS
Sbjct: 125 ESCDCLQGFQMTHS 138
Score = 138 bits (334), Expect = 2e-33
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 153 bits (371), Expect = 6e-38
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMDSVRSGPFGQ+FRPD FVFGQSGAGNNWAKGHYTEGAEL D+VLDV+RKEA
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
E CDCLQGFQLTHS
Sbjct: 125 EGCDCLQGFQLTHS 138
Score = 119 bits (287), Expect = 9e-28
Identities = 50/63 (79%), Positives = 58/63 (92%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 150 bits (363), Expect = 6e-37
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMDSVRSGPFGQ+FRPD +VFGQSGAGNNWAKGHYTEGAEL D+VLDVVRKEA
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
ES DCLQGFQLTHS
Sbjct: 125 ESTDCLQGFQLTHS 138
Score = 125 bits (302), Expect = 1e-29
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 150 bits (363), Expect = 6e-37
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDLEPGTMDSVRSGPFGQ+FRPD +VFGQSGAGNNWAKGHYTEGAEL D+VLDVVRKEA
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 436 ESCDCLQGFQLTHS 477
ES DCLQGFQLTHS
Sbjct: 125 ESTDCLQGFQLTHS 138
Score = 125 bits (302), Expect = 1e-29
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 6e-21
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
Score = 95.9 bits (228), Expect = 1e-20
Identities = 41/74 (55%), Positives = 59/74 (79%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDL+P +++ VRS +G++F P+ V G+SGAGNNW++G+Y +GAE+ D VL V+R+EA
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 436 ESCDCLQGFQLTHS 477
E+ D L+GFQL HS
Sbjct: 125 EAADSLEGFQLIHS 138
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 6e-21
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 245 PRA 253
PRA
Sbjct: 61 PRA 63
Score = 95.9 bits (228), Expect = 1e-20
Identities = 41/74 (55%), Positives = 59/74 (79%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
LVDL+P +++ VRS +G++F P+ V G+SGAGNNW++G+Y +GAE+ D VL V+R+EA
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 436 ESCDCLQGFQLTHS 477
E+ D L+GFQL HS
Sbjct: 125 EAADSLEGFQLIHS 138
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 424 RKEAESCDCLQGFQLTHS 477
RK+ E+C+ LQGF + HS
Sbjct: 126 RKQTENCEGLQGFLVFHS 143
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 244
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 245 PRA 253
PRA
Sbjct: 66 PRA 68
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 424 RKEAESCDCLQGFQLTHS 477
R+ A++C LQGF + HS
Sbjct: 121 RRLADNCSGLQGFFVFHS 138
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 245 PRA 253
PR+
Sbjct: 61 PRS 63
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 424 RKEAESCDCLQGFQLTHS 477
R+ A++C LQGF + HS
Sbjct: 121 RRLADNCSGLQGFFVFHS 138
Score = 59.7 bits (138), Expect = 1e-09
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 245 PRA 253
PR+
Sbjct: 61 PRS 63
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 424 RKEAESCDCLQGFQLTHS 477
R+ A++C LQGF + HS
Sbjct: 121 RRLADNCSGLQGFFVFHS 138
Score = 59.7 bits (138), Expect = 1e-09
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 245 PRA 253
PR+
Sbjct: 61 PRS 63
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 424 RKEAESCDCLQGFQLTHS 477
R+ A++C LQGF + HS
Sbjct: 121 RRLADNCSGLQGFFVFHS 138
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 245 PRA 253
PR+
Sbjct: 61 PRS 63
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 82.2 bits (194), Expect = 2e-16
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL D V+D V
Sbjct: 63 PRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRV 122
Query: 424 RKEAESCDCLQGFQLTHS 477
R+ E C LQGF + HS
Sbjct: 123 RRLTERCQSLQGFLIFHS 140
Score = 58.4 bits (135), Expect = 2e-09
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 238
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 239 YVPRA 253
+VPRA
Sbjct: 61 HVPRA 65
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 81.0 bits (191), Expect = 4e-16
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 424 RKEAESCDCLQGFQLTHS 477
R+ A++C LQGF + HS
Sbjct: 121 RRLADNCSGLQGFFVFHS 138
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 245 PRA 253
PR+
Sbjct: 61 PRS 63
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 81.0 bits (191), Expect = 4e-16
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 424 RKEAESCDCLQGFQLTHS 477
R+ A++C LQGF + HS
Sbjct: 121 RRLADNCSGLQGFFVFHS 138
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 245 PRA 253
PR+
Sbjct: 61 PRS 63
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 79.8 bits (188), Expect = 9e-16
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR + VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E+ D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 424 RKEAESCDCLQGFQLTHS 477
R+ A +C+ LQGF + HS
Sbjct: 120 RRLANNCEGLQGFFVFHS 137
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 245 PRA 253
PR+
Sbjct: 60 PRS 62
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 78.6 bits (185), Expect = 2e-15
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+ D LD +R+ A
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 126
Query: 436 ESCDCLQGFQLTHS 477
++C LQGF + HS
Sbjct: 127 DNCTGLQGFLVFHS 140
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 239 YVPRATSSTWSP 274
+VPRA P
Sbjct: 61 HVPRAVMVDLEP 72
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 78.6 bits (185), Expect = 2e-15
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+ D LD +R+ A
Sbjct: 66 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 125
Query: 436 ESCDCLQGFQLTHS 477
++C LQGF + HS
Sbjct: 126 DNCTGLQGFLVFHS 139
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 242 VPRATSSTWSP 274
VPRA P
Sbjct: 61 VPRAVMVDLEP 71
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 78.6 bits (185), Expect = 2e-15
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+ D LD +R+ A
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 126
Query: 436 ESCDCLQGFQLTHS 477
++C LQGF + HS
Sbjct: 127 DNCTGLQGFLVFHS 140
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 239 YVPRATSSTWSP 274
+VPRA P
Sbjct: 61 HVPRAVMVDLEP 72
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 78.6 bits (185), Expect = 2e-15
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+ D LD +R+ A
Sbjct: 67 MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLA 126
Query: 436 ESCDCLQGFQLTHS 477
++C LQGF + HS
Sbjct: 127 DNCTGLQGFLVFHS 140
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 238
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 239 YVPRATSSTWSP 274
+VPRA P
Sbjct: 61 HVPRAVMVDLEP 72
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 77.4 bits (182), Expect = 5e-15
Identities = 34/74 (45%), Positives = 50/74 (67%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEA 435
+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+ D V+D VR+
Sbjct: 72 MVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLV 131
Query: 436 ESCDCLQGFQLTHS 477
E+C LQGF + HS
Sbjct: 132 ENCRGLQGFLVFHS 145
Score = 60.9 bits (141), Expect = 5e-10
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +2
Query: 59 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 232
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 233 GKYVPRATSSTWSPAP 280
GK+VPRA P P
Sbjct: 64 GKHVPRAIMVDLEPTP 79
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 73.7 bits (173), Expect = 6e-14
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR L VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E+ D V+D V
Sbjct: 69 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 128
Query: 424 RKEAESCDCLQGFQLTHS 477
++ AE+C+ LQGF + HS
Sbjct: 129 KRLAENCNGLQGFVIFHS 146
Score = 62.1 bits (144), Expect = 2e-10
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 238
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 239 YVPR 250
+VPR
Sbjct: 67 HVPR 70
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 73.7 bits (173), Expect = 6e-14
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 PRHL-VDLEPGTMDSVRSGPFGQIFRPDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVV 423
PR L VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E+ D V+D V
Sbjct: 41 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 100
Query: 424 RKEAESCDCLQGFQLTHS 477
++ AE+C+ LQGF + HS
Sbjct: 101 KRLAENCNGLQGFVIFHS 118
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +2
Query: 143 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPR 250
EHGI P G YH + D + E IN ++ E +GGK+VPR
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPR 42
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 61.7 bits (143), Expect = 3e-10
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGP-FGQIFRPD-IFVFGQSG-AGNNWAKGHYTEGAELDDSVLDVVR 426
LVDLEP ++ + P F +F D IF+ G AGNNWA G Y +G E+ + ++D++
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 427 KEAESCDCLQGFQLTHS 477
+EAE+ + L G THS
Sbjct: 126 REAENTNNLDGILFTHS 142
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +2
Query: 74 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 253
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 61.7 bits (143), Expect = 3e-10
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +1
Query: 256 LVDLEPGTMDSVRSGP-FGQIFRPD-IFVFGQSG-AGNNWAKGHYTEGAELDDSVLDVVR 426
LVDLEP ++ + P F +F D IF+ G AGNNWA G Y +G E+ + ++D++
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 427 KEAESCDCLQGFQLTHS 477
+EAE+ + L G THS
Sbjct: 126 REAENTNNLDGILFTHS 142
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +2
Query: 74 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 253
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 339 EDKDVRTEDLSERSRADRVHGAGLQVDEVARGTYLPPEA 223
E+ + TEDLSERS ++ G V+E +P E+
Sbjct: 125 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 163
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 339 EDKDVRTEDLSERSRADRVHGAGLQVDEVARGTYLPPEA 223
E+ + TEDLSERS ++ G V+E +P E+
Sbjct: 76 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 114
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 339 EDKDVRTEDLSERSRADRVHGAGLQVDEVARGTYLPPEA 223
E+ + TEDLSERS ++ G V+E +P E+
Sbjct: 125 EELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVES 163
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 322 DGRSVRKVQSGQSPWCRAPSRRGGAGHVLAAGGFI 218
D S + G++P A + GG GHV +AGG I
Sbjct: 483 DEYSALMAELGETPAAGAGAGGGGGGHVASAGGGI 517
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 322 DGRSVRKVQSGQSPWCRAPSRRGGAGHVLAAGGFI 218
D S + G++P A + GG GHV +AGG I
Sbjct: 483 DEYSALMAELGETPAAGAGAGGGGGGHVASAGGGI 517
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.0
Identities = 19/72 (26%), Positives = 26/72 (36%)
Frame = -1
Query: 478 ASVSVGIPGGNHTIPLPFERRLRLNRRAQHPPCSVPWPSXXXXXXXXXXXCPDGRSVRKV 299
+S P T+P P+ + A +PP S P+PS P
Sbjct: 165 SSTPTPYPSSQPTMPTPYPTG---SGAAPYPPSSTPYPSAGAMGYNPYMNVPQSTPYPMG 221
Query: 298 QSGQSPWCRAPS 263
SG SP+ A S
Sbjct: 222 ASGASPYPSASS 233
>Z67734-3|CAA91529.2| 1050|Caenorhabditis elegans Hypothetical
protein B0198.3 protein.
Length = 1050
Score = 26.6 bits (56), Expect = 9.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 143 EHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRATSSTWSP-APWTL 289
EH +H D DL E VY++ AS ++ TS T SP AP L
Sbjct: 646 EHSYASILDFHVDPDLSDEVFEVYWDSASSSEH--SITSPTCSPLAPIAL 693
>AF024491-2|AAT92081.1| 765|Caenorhabditis elegans Hypothetical
protein C24A1.3b protein.
Length = 765
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 246 PAPPRRLGARHHGLCPLWTFRTDLPSG-HLCLRTVRRRQQLGQGT 377
P+P RL + L R+ LP+ HLCL + ++ +G G+
Sbjct: 482 PSPMGRLTSLTRDKADLLQLRSALPAPFHLCLAEIEFQESIGSGS 526
>AF024491-1|AAB70312.2| 850|Caenorhabditis elegans Hypothetical
protein C24A1.3a protein.
Length = 850
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 246 PAPPRRLGARHHGLCPLWTFRTDLPSG-HLCLRTVRRRQQLGQGT 377
P+P RL + L R+ LP+ HLCL + ++ +G G+
Sbjct: 482 PSPMGRLTSLTRDKADLLQLRSALPAPFHLCLAEIEFQESIGSGS 526
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 228 PAASTCPAPPRRLGA 272
P A+ CP PPR LGA
Sbjct: 293 PDAAYCPCPPRTLGA 307
>AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical
protein Y57E12B.3 protein.
Length = 684
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +3
Query: 186 TCSWSASM---YTTMKPPAASTCPAPPRRLGARHHGLCPLWTFRTDLPS 323
T W +SM T + PP T P L PLWT T P+
Sbjct: 168 TSDWLSSMPTIQTLLPPPLPLTTLEVPENENFGFTSLAPLWTLPTQPPA 216
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 261 DEVARGTYLPPEASL*YTLMRSNCKSESPW 172
D + RGT PP+A + +RS+ E+ W
Sbjct: 49 DVIFRGTVSPPDAEMMIANVRSDAFKETDW 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,354,711
Number of Sequences: 27780
Number of extensions: 239787
Number of successful extensions: 844
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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