Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0299
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.55 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   1.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.3  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   2.2  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   2.2  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   2.2  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   9.0  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   9.0  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -1

Query: 130 LPELSSDLVAALTSLDMYDFPHFVLFM*TINY--LTLKMLSAR 8
           L E + +L  AL+S++   F HFVL M  IN+  +T  ++ AR
Sbjct: 870 LVEFALELKKALSSINEQSFNHFVLKM-GINHGPVTAGVIGAR 911


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 403 DSVLDVVRKEAESCDCLQG 459
           DS+++++R   ++CD L G
Sbjct: 107 DSIINIIRVRVDACDRLWG 125


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +2

Query: 191 QLERINVYYNEASGGKYVPRATSSTWSPA 277
           QL+R ++ +N    G+  PR+ +++ SPA
Sbjct: 720 QLKRTDIIHNYIMRGEASPRSPNASPSPA 748


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +1

Query: 322 PDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAES 441
           PD+   G+S  G      H     + DD   D ++  A++
Sbjct: 66  PDVMSAGESKHGLTNTASHTRLSCDCDDKFYDCLKNSADT 105


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +1

Query: 322 PDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAES 441
           PD+   G+S  G      H     + DD   D ++  A++
Sbjct: 71  PDVMSAGESKHGLTNTASHTRLSCDCDDKFYDCLKNSADT 110


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +1

Query: 322 PDIFVFGQSGAGNNWAKGHYTEGAELDDSVLDVVRKEAES 441
           PD+   G+S  G      H     + DD   D ++  A++
Sbjct: 71  PDVMSAGESKHGLTNTASHTRLSCDCDDKFYDCLKNSADT 110


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 179 DSDLQLERINVYYNEASGGKYV 244
           D+ L+   I  Y N+  GG++V
Sbjct: 72  DARLKFSNIAPYLNQIYGGQFV 93


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +3

Query: 192 SWSASMYTTMKPPAASTCPAPPRRLGARHHGLC 290
           SW +   +      A  C A  R+ G+  +G+C
Sbjct: 68  SWQSKWLSINHSACAIRCLAQRRKGGSCRNGVC 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,837
Number of Sequences: 438
Number of extensions: 2830
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)