Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0298
(676 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 71 9e-13
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 60 2e-09
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 56 3e-08
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 44 9e-05
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 44 1e-04
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 40 0.001
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 40 0.002
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 38 0.007
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 38 0.010
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.010
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 34 0.091
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 33 0.21
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.21
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.21
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 31 0.64
SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.64
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 31 0.85
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.85
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 29 2.6
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 29 2.6
SB_11502| Best HMM Match : PA (HMM E-Value=9.3) 29 2.6
SB_41005| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 29 3.4
SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07) 29 3.4
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 29 4.5
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 29 4.5
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 29 4.5
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 28 6.0
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 28 6.0
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 28 6.0
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 28 6.0
SB_25551| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 28 6.0
SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_15594| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_33815| Best HMM Match : F5_F8_type_C (HMM E-Value=0.32) 28 7.9
SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 7.9
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 70.9 bits (166), Expect = 9e-13
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK-VTPKKAKA 432
HF +GE++ V DP T RSRGF F+ FK P+++D V+ +G ++ KK VT K
Sbjct: 127 HFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKMVTTTK--- 183
Query: 433 RHGKIFVGGLSSQISDDEIRNFFSE 507
KIF+GGLS+ S+++++ +FS+
Sbjct: 184 ---KIFIGGLSTNTSEEDMKKYFSQ 205
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 59.7 bits (138), Expect = 2e-09
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTP--KKAK 429
+F YGE+ +++K D TGR RGFAF+ FK D I+ K P K
Sbjct: 48 YFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEAD--------AIDPKPAAPIGKPPH 99
Query: 430 ARHGKIFVGGLSSQISDDEIRNFFSE 507
R KIFVGGL + SD++IR +F +
Sbjct: 100 LRVKKIFVGGLKPETSDEKIREYFGK 125
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +3
Query: 516 ILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
+ E+E + + N+R+GFCF++F+SE V+ + +T I G V+VKRA PK
Sbjct: 130 VKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRALPK 182
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 256 HFG-AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKA 426
+FG AY ++ I T+ ++ R RGF F+ F + +++DK+ H I KV K+A
Sbjct: 122 YFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRA 179
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2
Query: 149 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELR 253
G S D N DD KLFVGGLS+ETT + L+
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLK 46
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +1
Query: 439 GKIFVGGLSSQISDDEIRNFFSE 507
GK+FVGGLS + + + ++ +FS+
Sbjct: 29 GKLFVGGLSYETTKESLKEYFSK 51
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/101 (29%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Frame = +1
Query: 244 GAPCHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPK 420
G +F +G I + + +K D GRSRGF F+ +++ +S+++V+ +H ++++++ PK
Sbjct: 65 GLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPK 121
Query: 421 K-----------AKARHGKIFVGGLSSQISDDEIRNFFSEL 510
+ A ++ KIFVGGL+S +++I+ +F+ L
Sbjct: 122 RSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSL 162
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 253 CHFGAYGEIESINVKTD-PNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAK 429
C GE+ +++K D N R RGFAF+ F E ++KV A H I K+ KKA+
Sbjct: 163 CRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAE 222
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
GTI V+ K + +GF F+T+ES VN++LK + ++++ KR+ P+
Sbjct: 74 GTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRSVPR 126
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 507 IGTILEVEMPFDKTKNQR-KGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
+G +++V++ D+ +R +GF F+TF+++ +V + I K +VK+A P+
Sbjct: 168 MGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQ 224
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 200 RKLFVGGLSWETTDKELR 253
RK+F+GGL+W TT++ L+
Sbjct: 50 RKIFIGGLNWNTTEEGLK 67
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV-----TPK 420
+F +GEI+ VK DPNT RSRGF F+ FK E V++ H I + PK
Sbjct: 134 YFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST-SHRIQGRLCEVRLPRPK 192
Query: 421 KAKARHGKIFVGGLSSQISDDEIRNFFSE 507
+ K+FVG L ++ + +F++
Sbjct: 193 EELNVPKKLFVGRLPESTTEKTLMEYFAQ 221
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 519 LEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRA 665
LE++M D+ N+ KG+CF+ F +E +V+ L + GKDV++K+A
Sbjct: 133 LEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Frame = +1
Query: 262 GAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGE-HTINNKKVTPKKAKAR 435
G+ ++ S+++ P G+SR F F+ F + ID ++ E H+I+NK+V K+A R
Sbjct: 34 GSEADVSSVSLAKTPE-GKSRKFCFVEFSNGSDIIDNIVFNFESHSIDNKQVEVKRAMPR 92
Query: 436 HG----------KIFVGGLSSQISDDEIRNFFSEL 510
K+F+GGL + S+++++ + L
Sbjct: 93 DDPNELAHVRTKKLFIGGLKDEHSEEDVKTALAPL 127
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +1
Query: 301 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
D T R RGF F+ F++ S DK H INNKKV KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 537 FDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
FDK + +GF F+TFESE + T I K V+VK+A PK
Sbjct: 4 FDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 44.4 bits (100), Expect = 9e-05
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVF---KAPESI--DKVMAAGEHTINNKKVTPK 420
+F AYGE+ + V D T +SRGF ++ F K ++ DKV G H I+ K+V K
Sbjct: 33 YFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKV-ENGAHRIDGKEVEVK 91
Query: 421 KAKARHG----------KIFVGGLSSQISDDEIRNFFSEL 510
+A R KIFVGGL + ++I+ L
Sbjct: 92 RAIPRDDNSATSHEKTKKIFVGGLPEDATKEDIQEAIESL 131
Score = 34.7 bits (76), Expect = 0.069
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTP----KRPIGGKDVDVKRATPK 674
G + +V + D + +GF ++TF V ++LK I GK+V+VKRA P+
Sbjct: 38 GELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPR 96
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 540 DKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
D+TK+ +GF F+ +E ++L K + GK V+ K+ATP+
Sbjct: 147 DETKH--RGFAFVELNNEDQADELCCVKKIHVKGKMVEAKKATPR 189
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 167 NSAEAPGRDDDRKLFVGGLSWETTDKELRVILE 265
N E D KLFVGGL+ ETT++ LR E
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFE 35
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/65 (29%), Positives = 39/65 (60%)
Frame = +1
Query: 310 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARHGKIFVGGLSSQISDDEI 489
+G+S+GFAF+ + E+++ V+ +H I+N V+ +K + + K+ + + S I + +I
Sbjct: 79 SGKSKGFAFVRLRKKEAVESVLGRDDHVIDNSDVSMEK-QDTYRKVILKNIPSSIGESQI 137
Query: 490 RNFFS 504
FS
Sbjct: 138 LEHFS 142
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDV 650
G I V +P + +RKG C +TF S +++K K I G D+
Sbjct: 145 GEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIHGYDI 191
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPK--KAK 429
HF + GEI S+ + + T +G + F + +V+ +H I+ + +
Sbjct: 140 HFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIHGYDIITEYYMNL 199
Query: 430 ARHGKIFVGGLSSQISDDEIRN 495
+ K+ + L ++ D+I+N
Sbjct: 200 KQPKKLCLKNLPYNVTVDQIKN 221
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +1
Query: 271 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKK----AKAR- 435
GEI ++ DP TG ++GFAF F S + + T+N+K + P + K+R
Sbjct: 177 GEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT----TLNDKDIRPGRRLAICKSRS 232
Query: 436 HGKIFVGGLSSQISDDEIRNFFSEL 510
+ ++FV G+ + S +EI FS++
Sbjct: 233 NSRLFVKGIPKRKSKEEIFQEFSKV 257
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNK--KVT---PK 420
FG G + S + D TG+S G+AF+ + P+ +K V + NK KV+ P
Sbjct: 47 FGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPS 106
Query: 421 KAKARHGKIFVGGLSSQISDDEIRNFF 501
+ ++ +++ GL + ++E+ F
Sbjct: 107 STEIKNANLYISGLPKDMKEEEVEALF 133
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 411
+F YG++ +++ TD TG+S+G + + P +++K++ H I +V
Sbjct: 338 YFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKILEEPVHVIGKSQV 389
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +1
Query: 397 NNKKVTPKKAKARHGKIFVGGLSSQISDDEIRNFFSE 507
N+ +PK + +FVGGL+S ++ ++++F +
Sbjct: 66 NSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQ 102
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 232 DHR*GAPCHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 363
D+ GA H A G +E++ + TD NTG+ R F F+ F +P S+
Sbjct: 469 DYERGAINHSNA-GPLENVRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 21/82 (25%)
Frame = +1
Query: 322 RGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKA---------------------KARH 438
+GF F+ F+ P +I+ V+A H ++ K + PK A A
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVMGGPQRGSAND 201
Query: 439 GKIFVGGLSSQISDDEIRNFFS 504
GK+F+GGL+ ++++++ +FS
Sbjct: 202 GKVFIGGLAFGTTEEDLKEYFS 223
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 537 FDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
F++ KGF F+TF + +L + GK +D K A P+
Sbjct: 134 FERRARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR 179
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +2
Query: 185 GRDDDRKLFVGGLSWETTDKELR 253
G +D K+F+GGL++ TT+++L+
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLK 219
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 411
FG YG IE +++ TG+S+GF ++ ++ ES + + AG H I+ K V
Sbjct: 83 FGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRAL-AGTHIIDGKWV 131
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVTPKKAKAR 435
G+I S+ V TDP G+S+GF F+ F+ PE ++ V I +++ +AK R
Sbjct: 133 GKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKR 187
Score = 34.7 bits (76), Expect = 0.069
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 375
F YG I S V D + G S+GF F+ F +PE K +
Sbjct: 232 FSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 375
F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1177 FSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 489 QKLLQ*IGTILEVEMPFDKTKNQRKGFCFITF-ESEPVVNDLLKTPKRPIGGKDVDVKRA 665
Q++ G + V++P D+T N +GF ++ + + E L I G+++ V+
Sbjct: 1174 QEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQIDGQEIAVQSV 1233
Query: 666 TP 671
P
Sbjct: 1234 LP 1235
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 280 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 375
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 283 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 375
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 516 ILEVEMPFDKTKNQRKGFCFITFESEPVVNDLL-KTPKRPIGGKDVDVKRATPK 674
+L V++ D+ + +GF F+TF SE ++ + K + G+ + V +A P+
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPR 88
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVTPKKAKAR 435
F Y ++ + V +D T R RGFAF+ F + +++ D + + + + +A++R
Sbjct: 250 FSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSR 308
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 34.7 bits (76), Expect = 0.069
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKK----- 423
F G I + DP +G ++GFAF F + + ++NK++ P K
Sbjct: 172 FEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV----KKLDNKEIRPGKRLGVC 227
Query: 424 AKARHGKIFVGGLSSQISDDEIRNFFSEL 510
+ ++FVG + S EI FS++
Sbjct: 228 ISVANSRLFVGSIPKTKSKQEILEEFSKV 256
>SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 34.7 bits (76), Expect = 0.069
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -3
Query: 386 SPAAMTLSIDSGALNTMKANPRDLPVFGSVFTLILSISPYAPK*HGAPYLWSPSSAHQQ 210
SP A++ +D G +A +++P F TL L + P+A G P ++PSS H++
Sbjct: 371 SPDALSKGLDMGWGALSRAGVQEMPAFP---TLRLPLHPFASTGFGTPAFYNPSSYHRE 426
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 34.3 bits (75), Expect = 0.091
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 274 EIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 375
++ + V TD TGR RGF F+ F + E ++K +
Sbjct: 29 DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/75 (18%), Positives = 35/75 (46%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
F G +ES+ + D TG +GF +++F++ +++ + +K+ +K +
Sbjct: 76 FTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPSKDKP 135
Query: 439 GKIFVGGLSSQISDD 483
F+ + + D+
Sbjct: 136 QTEFISHIQVRFRDN 150
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 259 FGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNKKVTPKKAK 429
F A+G I ++ + D +TG S+GFAFI F + ++ D + A G++ + N+ +T A
Sbjct: 120 FSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQY-LCNRPITVSYAF 178
Query: 430 ARHGK 444
+ K
Sbjct: 179 KKESK 183
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 268 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 360
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESE 593
G I+ V + DK ++KGFCF+ +E +
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQ 30
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 268 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 360
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESE 593
G I+ V + DK ++KGFCF+ +E +
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQ 30
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 375
F YG++ I + D NT SRGFAF+ F + M
Sbjct: 36 FKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAM 74
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
F YG++ + + D T SRG AFI+F +S +AA +N K++ + K
Sbjct: 30 FERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA----VNKKQMFGRTIKCTI 85
Query: 439 GK 444
K
Sbjct: 86 AK 87
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
F G + V +P G SRGFAF+ + E +K G+ N ++V + +
Sbjct: 226 FSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK----GQRAHNGRQVEGSNIRVAY 281
Query: 439 G 441
G
Sbjct: 282 G 282
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVT 414
F +G +E +++ D +GRSRGF F++ ++ + I + + ++ + +T
Sbjct: 29 FEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKMNQSSVGGRNIT 80
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 31.5 bits (68), Expect = 0.64
Identities = 27/112 (24%), Positives = 51/112 (45%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
F +G++ +++ + G +GFAFI F++ + + V+ KK K+ +
Sbjct: 108 FSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESKTKK-EEKREPSID 166
Query: 439 GKIFVGGLSSQISDDEIRNFFSELELS*KWRCPLTKQRTKERASVSSHLNLS 594
K + S+ ++ + S+L LS R ++RT SV S+ N S
Sbjct: 167 DKTKIKKRRRSHSESDLES--SKLSLSQSER---KRRRTTSETSVDSNENAS 213
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 489 QKLLQ*IGTILEVEMPFDKTKNQRKGFCFITFESE 593
+K+ G +L V +P K + KGF FI FES+
Sbjct: 105 KKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESK 139
>SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAE----NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKE 247
+ND +D D+++NG + N GGD D + + DDD + G S++ D +
Sbjct: 58 DNDGGDDDDDDDDEVNGGNDDDDFNNGGDCDDDDDDDDDDDDDDDDINKKGASYDDDDDD 117
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 31.5 bits (68), Expect = 0.64
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 381
F A+G++ ++ +P TG+ +G+ FI ++ +S + +A+
Sbjct: 219 FEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 360
F +G I I++ DP + +GFAF+ + PE+
Sbjct: 122 FHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEA 155
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFE-SEPVVNDLLKTPKRPIGGKDVDVKRATP 671
G I +V++P D T ++ +GF F+ FE +E + + + G+ + V A P
Sbjct: 29 GDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNESELFGRTIRVNLAKP 83
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 357
F +G+I + + D T + RGF F+ F+ E
Sbjct: 25 FIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAE 57
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 83 NDNFXEDITTDNQLNGNAENGGGDSQDH-NSAEAPGRDDD 199
ND+ +DI D+ NGN + G D+ D N E G DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDDD 58
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 381
F +G+I V D T S+G AF+ +++ ES+ + +AA
Sbjct: 436 FKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAA 476
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAE-NGGGDSQDHNS 172
NND+ +D T D+ N N + NGGG D+N+
Sbjct: 193 NNDDDDDDDTDDDDHNNNDDDNGGGGDDDNNN 224
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKL--------FVGGLSWE 232
NN+N D +DN + N++N ++ D+N+ R D ++ ++ GL+WE
Sbjct: 613 NNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKNPEGWIRGLNWE 671
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
NNDN ++ + +N N N N ++ D+NS + D
Sbjct: 593 NNDNNNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSD 632
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
NNDN ++ +N N N N ++ D+NS + D
Sbjct: 597 NNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSDNNSD 636
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 83 NDNFXEDITTDNQLN-GNAENGGGDSQDHNS 172
+DNF +DI+ D LN G A N + ++NS
Sbjct: 335 HDNFNDDISNDGNLNGGGANNNNNKNNNYNS 365
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKT 620
G + +V++ +D + Q KGFCF+T ++ + ++T
Sbjct: 299 GIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQT 335
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
NN+N + +N N N N ++ D NS E DDD
Sbjct: 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDD 57
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 522 EVEMPFDKTKNQRKGFCFITF-ESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
EV + D KN+ KGF F++F E + + IGGK V A K
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK 592
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 286 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH-TINNKKV 411
+ V DP +S+GF F+ F E K +A + TI K+V
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQV 584
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 381
F YGEI++++V D TG +G+A + ++ + + A
Sbjct: 313 FSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEA 353
>SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
++DN +D DN NG+ ++ D D + +A DDD
Sbjct: 61 DSDNNYDDNDDDNDDNGDDDDNDDDDDDDDDDDADDDDDD 100
>SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 86 DNFXEDITTDNQLNGNAENGG-GDSQDHNSAEAPGRDDD 199
D + +D D+ + + +N G GD D+ AE G DDD
Sbjct: 821 DYYYDDDDDDDDDDDDGDNDGDGDGDDYGDAENYGEDDD 859
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
+N+N EDI N EN GG+S + N + DD+
Sbjct: 147 SNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDE 186
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
NN+N +I +N N N N ++ ++N+ + DDD
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDD 151
>SB_11502| Best HMM Match : PA (HMM E-Value=9.3)
Length = 511
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -1
Query: 676 GFGVARFTSTSFPPIGLLGVLSKSFTTGSDSNVMKQKPFLWFFVLSK 536
G G A F + P G+ GV T G + ++PF W V+ +
Sbjct: 290 GIGGAAFQTDDLYPTGVGGVQRIDLTMGPPLTFLMEQPFKWVVVVER 336
>SB_41005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 568
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -1
Query: 253 TELLICGLPAQPTNKKFSVVIASWGFSTVMILRITATVLCISIKLVVGGNIFXKIIVI 80
T+++I P + KFS GFS M++ T ++ + +++ G F K+ ++
Sbjct: 76 TQVMIAKFEDSPESSKFSETWKRHGFSITMVILTTLLLIYSIVAIIISG--FEKVKIL 131
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 447 FCRRTQQSNLR**NQKLLQ*IGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDL 611
F R T +S LR + G + E ++ DK KG+ FITFES+ V + L
Sbjct: 15 FNRETTESELR----AFFEEYGVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
>SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07)
Length = 423
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
NN N E+ DN + +A+N D D+N+ + G DD
Sbjct: 14 NNGNDDENNYNDNHNDKDADNKNNDDGDNNNNDKCGYKDD 53
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 442 KIFVGGLSSQISDDEIRNFFSE 507
K+FVGG+ + DD +R FF++
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQ 32
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 277 IESINVKTDPNTGRSRGFAFIVFKAPES 360
+ + V TD TGR RGF F+ +A ++
Sbjct: 107 VVDVRVITDRETGRPRGFGFVTLEAKKT 134
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 140 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRVILEHTVK*RVLM 292
NGG + D + A R++ +LFV GL E ++ +LR I V V M
Sbjct: 603 NGGKSTDDASDAAYELRNEGVELFVVGLGDENSEAQLREIASVPVIDHVFM 653
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 194 DDRKLFVGGLSWETTDKELRVI 259
DDRKLFVG +S +++LRV+
Sbjct: 212 DDRKLFVGMISKHAKEEDLRVM 233
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 411
I+ + K+ N G++ G AF+VFK+ K + I ++ +
Sbjct: 361 IDLLKHKSGKNQGKNTGVAFVVFKSNNDASKALKMDRSYIGHRYI 405
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF 345
F G++ + + +D N+ RS+G A+I F
Sbjct: 166 FSKVGQVSDVRIISDRNSRRSKGIAYIEF 194
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 390
F +G + I + + RS+G+AF+ F A + + K+ A H
Sbjct: 118 FEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADTMH 160
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAE 178
N+D+ ++ DN + +A +GGGD+ D++ ++
Sbjct: 802 NDDDDDDNGDADNGRDNDAHDGGGDNSDYDGSD 834
>SB_25551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 83 NDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
+D+ +D D+ + +GGGD D + G DDD
Sbjct: 104 DDDGDDDDDDDDDDDDGGGDGGGDGDDDDDGNGDGGDDD 142
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGN--AENGGGDSQDHN 169
NNDN+ + DN N N NG DS D+N
Sbjct: 90 NNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNN 121
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 77 ANNDNFXEDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRK 205
+N+DN D +T N N N EN D S +NS + DD K
Sbjct: 103 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSK 144
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 77 ANNDNFXEDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRK 205
+N+DN D +T N N N EN D S +NS + DD K
Sbjct: 289 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSK 330
>SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 634 IGLLGVLSKSF-TTGSDSNVMKQKPFLWFFVLSKGISTSKIVP 509
I L G LS +F +GSDSNV + W F I + ++P
Sbjct: 8 IALFGSLSHAFFMSGSDSNVYGRHKDSWGFTTDHKIYSHLVIP 50
>SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 83 NDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 205
+DN +D + N + +GG D D++S E DRK
Sbjct: 117 DDNGEDDYDGNGDNNNDDNDGGDDDNDYDSNETMAFKKDRK 157
>SB_15594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 676 GFGVARFTSTSFP---PIGLLGVLSKSFTTGSDSNVMKQKPFLWFFVLSK 536
G G+ R++S S P G +S S+T V ++ FL FFVL K
Sbjct: 388 GSGITRYSSLSVPFYCKFSSHGDVSLSYTIKKSVPVWHEEKFLSFFVLYK 437
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
+ND E+I DN+ N N +N DS ++ + + +D
Sbjct: 89 DNDTNDENINDDNEKNTNDKNNNDDSNENTNDDNDKNTND 128
>SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGG 220
++D +D D+ + G+ ++ GD D + + G DDD + GG
Sbjct: 248 DDDGEVDDAGGDDGVGGDNDDDRGDDGDDDEDDDRGNDDDEDDWGGG 294
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +1
Query: 268 YGEIESINVK---TDPNTGRSRGFAFIVFKAPESIDKVM 375
+GEIE PN G RG+ F+ FK E K +
Sbjct: 410 FGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKAL 448
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 265 AYGEIESINVKTDPNTGRSRGFAF 336
++GE+ + N+ D TG S+G+AF
Sbjct: 695 SFGELRAFNLVKDSATGLSKGYAF 718
>SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
NN+N + +N N N N D D + + DDD
Sbjct: 87 NNNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDNDDD 126
>SB_33815| Best HMM Match : F5_F8_type_C (HMM E-Value=0.32)
Length = 245
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 634 IGLLGVLSKSF-TTGSDSNVMKQKPFLWFFVLSKGISTSKIVP 509
I L G LS +F +GSDSNV + W F I + ++P
Sbjct: 8 IALFGSLSHAFFMSGSDSNVYGRHKDSWGFTTDHKIYSHLVIP 50
>SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGN--AENGGGDSQDHN 169
NNDN+ + DN N + NG DS D+N
Sbjct: 192 NNDNYDNNDNNDNNDNNDNYDNNGNNDSNDNN 223
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 113 DNQLNGNAENGGGDSQD 163
DN +NG+ ++GGGD D
Sbjct: 594 DNDVNGDGDSGGGDDDD 610
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,544,091
Number of Sequences: 59808
Number of extensions: 412607
Number of successful extensions: 2864
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2641
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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