Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0298
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 79 3e-15
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 79 3e-15
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 70 2e-12
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 56 2e-08
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 56 2e-08
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 56 2e-08
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 56 2e-08
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 56 2e-08
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 42 5e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 42 5e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 42 5e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.001
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 40 0.002
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 40 0.002
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 39 0.003
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 38 0.005
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.005
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.005
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 37 0.011
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 37 0.015
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 37 0.015
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 37 0.015
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 37 0.015
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 37 0.015
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 37 0.015
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 37 0.015
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 36 0.026
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 36 0.026
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 36 0.026
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 36 0.035
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 35 0.046
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.061
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 35 0.061
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 34 0.11
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 34 0.11
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 34 0.11
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 34 0.11
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 34 0.11
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.25
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.25
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 33 0.25
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 32 0.43
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 31 0.57
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 31 0.57
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 31 0.99
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.99
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.99
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 31 0.99
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 30 1.3
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical ... 30 1.7
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 2.3
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 29 2.3
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 29 4.0
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 29 4.0
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 28 5.3
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 28 5.3
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 28 5.3
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 5.3
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 28 5.3
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z68161-10|CAN86582.1| 705|Caenorhabditis elegans Hypothetical p... 27 9.2
Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical pr... 27 9.2
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 27 9.2
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 27 9.2
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 27 9.2
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 27 9.2
AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribo... 27 9.2
AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribo... 27 9.2
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 9.2
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 27 9.2
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 79.0 bits (186), Expect = 3e-15
Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
HF YGE+ VK D GRSRGFAF+ F E +AA E TI K V K AK+R
Sbjct: 48 HFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSR 107
Query: 436 HG-KIFVGGLSSQISDDEIRNFFSELELS*KWRCPLTKQRTKER 564
K+FVGGL S S+ ++R+ F + P KQ TK R
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ-TKAR 150
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G + ++E PFDK R+ F FI FE E + K+ G ++ DVK+A P+
Sbjct: 134 GKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
HF +G+++ I D T R FAFIVF+ ES DK + + T ++ KKA
Sbjct: 129 HFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VP 187
Query: 436 HGKIFVG 456
GK F G
Sbjct: 188 QGKRFPG 194
Score = 35.1 bits (77), Expect = 0.046
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 110 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKEL 250
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDL 45
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRA 665
G + + ++ +D+T + +GF F+ F + L ++ I GK V+VK A
Sbjct: 53 GEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 79.0 bits (186), Expect = 3e-15
Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
HF YGE+ VK D GRSRGFAF+ F E +AA E TI K V K AK+R
Sbjct: 48 HFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSR 107
Query: 436 HG-KIFVGGLSSQISDDEIRNFFSELELS*KWRCPLTKQRTKER 564
K+FVGGL S S+ ++R+ F + P KQ TK R
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ-TKAR 150
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G + ++E PFDK R+ F FI FE E + K+ G ++ DVK+A P+
Sbjct: 134 GKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
HF +G+++ I D T R FAFIVF+ ES DK + + T ++ KKA
Sbjct: 129 HFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VP 187
Query: 436 HGKIFVG 456
GK F G
Sbjct: 188 QGKRFPG 194
Score = 35.1 bits (77), Expect = 0.046
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 110 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKEL 250
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDL 45
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRA 665
G + + ++ +D+T + +GF F+ F + L ++ I GK V+VK A
Sbjct: 53 GEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPK----- 420
+FG +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+ PK
Sbjct: 64 YFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Query: 421 ----KAKARHGKIFVGGLSSQISDDEIRNFF 501
K + K+F+GGLS+ + ++++ +F
Sbjct: 124 RTQAKLVTKTKKVFIGGLSATSTLEDMKQYF 154
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F YG++E + D T R RGF F+ F + E DKV H IN K V KKA+ +
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G + + + FDK + +GF F+TF+S+ V + + + I GK V+ K+A PK
Sbjct: 158 GKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 34.3 bits (75), Expect = 0.081
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 185 GRDDDRKLFVGGLSWETTDKELR 253
G D K+F+GGLSW+TT + LR
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLR 62
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G + E + D + +GF FITF V+ +L + + GK +D K A PK
Sbjct: 69 GEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 439 GKIFVGGLSSQISDDEIRNFF 501
GK+F+GGLS Q + + +R++F
Sbjct: 45 GKMFIGGLSWQTTAENLRDYF 65
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPK----- 420
+FG +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+ PK
Sbjct: 64 YFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Query: 421 ----KAKARHGKIFVGGLSSQISDDEIRNFF 501
K + K+F+GGLS+ + ++++ +F
Sbjct: 124 RTQAKLVTKTKKVFIGGLSATSTLEDMKQYF 154
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F YG++E + D T R RGF F+ F + E DKV H IN K V KKA+ +
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G + + + FDK + +GF F+TF+S+ V + + + I GK V+ K+A PK
Sbjct: 158 GKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 34.3 bits (75), Expect = 0.081
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 185 GRDDDRKLFVGGLSWETTDKELR 253
G D K+F+GGLSW+TT + LR
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLR 62
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G + E + D + +GF FITF V+ +L + + GK +D K A PK
Sbjct: 69 GEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 439 GKIFVGGLSSQISDDEIRNFF 501
GK+F+GGLS Q + + +R++F
Sbjct: 45 GKMFIGGLSWQTTAENLRDYF 65
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
+ +GEI I V DP T RSRGF F+ F +D M H I+ K V PK+A R
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 102
Query: 439 GK-----------IFVGGLSSQISDDEIRNFFSELELS*KWRCPLTKQRTKER 564
K ++V G+ ++D + +F++ K L K K R
Sbjct: 103 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 47 GEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 101
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F YG + + D T + RGF F+ F +S+D+ + H +N + +K ++
Sbjct: 133 YFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 138 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 442 KIFVGGLSSQISDDEIRNFFSE 507
KIFVGGL+S +DD +R F+S+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQ 45
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 134 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELR 253
AENG GD+ S E ++ RK+FVGGL+ TTD +R
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMR 40
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
+ +GEI I V DP T RSRGF F+ F +D M H I+ K V PK+A R
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 64
Query: 439 GK-----------IFVGGLSSQISDDEIRNFFSELELS*KWRCPLTKQRTKER 564
K ++V G+ ++D + +F++ K L K K R
Sbjct: 65 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 9 GEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 63
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F YG + + D T + RGF F+ F +S+D+ + H +N + +K ++
Sbjct: 95 YFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 100 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
+ +GEI I V DP T RSRGF F+ F +D M H I+ K V PK+A R
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 64
Query: 439 GK-----------IFVGGLSSQISDDEIRNFFSELELS*KWRCPLTKQRTKER 564
K ++V G+ ++D + +F++ K L K K R
Sbjct: 65 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 9 GEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 63
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F YG + + D T + RGF F+ F +S+D+ + H +N + +K ++
Sbjct: 95 YFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 100 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
+ +GEI I V DP T RSRGF F+ F +D M H I+ K V PK+A R
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 102
Query: 439 GK-----------IFVGGLSSQISDDEIRNFFSELELS*KWRCPLTKQRTKER 564
K ++V G+ ++D + +F++ K L K K R
Sbjct: 103 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 47 GEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 101
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F YG + + D T + RGF F+ F +S+D+ + H +N + +K ++
Sbjct: 133 YFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 138 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 442 KIFVGGLSSQISDDEIRNFFSE 507
KIFVGGL+S +DD +R F+S+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQ 45
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 134 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELR 253
AENG GD+ S E ++ RK+FVGGL+ TTD +R
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMR 40
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
+ +GEI I V DP T RSRGF F+ F +D M H I+ K V PK+A R
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRD 102
Query: 439 GK-----------IFVGGLSSQISDDEIRNFFSELELS*KWRCPLTKQRTKER 564
K ++V G+ ++D + +F++ K L K K R
Sbjct: 103 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G I ++ + D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 47 GEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 101
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F YG + + D T + RGF F+ F +S+D+ + H +N + +K ++
Sbjct: 133 YFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 138 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 442 KIFVGGLSSQISDDEIRNFFSE 507
KIFVGGL+S +DD +R F+S+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQ 45
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 134 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELR 253
AENG GD+ S E ++ RK+FVGGL+ TTD +R
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMR 40
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 411
+F YG I+S+N+ DP+TG RGFA I F + + +K + H I+ +V
Sbjct: 44 YFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRV 95
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATP 671
G+I V M +D +GF ITF+S+ N ++ I G VDV+ P
Sbjct: 49 GSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F +G + V DPNT SRGF F+ F + S + M H + K V K+A R
Sbjct: 68 YFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 127
Score = 34.3 bits (75), Expect = 0.081
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G +++ + D +GF F+TF S + +GGK VD KRA P+
Sbjct: 73 GPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 127
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +2
Query: 200 RKLFVGGLSWETTDKEL 250
RKLF+GGLS +TTD++L
Sbjct: 49 RKLFIGGLSHDTTDEQL 65
Score = 30.7 bits (66), Expect = 0.99
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 442 KIFVGGLSSQISDDEIRNFFSE 507
K+F+GGLS +D+++ N+FS+
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQ 71
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F +G + V DPNT SRGF F+ F + S + M H + K V K+A R
Sbjct: 88 YFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 147
Score = 34.3 bits (75), Expect = 0.081
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G +++ + D +GF F+TF S + +GGK VD KRA P+
Sbjct: 93 GPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 147
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +2
Query: 200 RKLFVGGLSWETTDKEL 250
RKLF+GGLS +TTD++L
Sbjct: 69 RKLFIGGLSHDTTDEQL 85
Score = 30.7 bits (66), Expect = 0.99
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 442 KIFVGGLSSQISDDEIRNFFSE 507
K+F+GGLS +D+++ N+FS+
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQ 91
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F +G + V DPNT SRGF F+ F + S + M H + K V K+A R
Sbjct: 89 YFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 148
Score = 34.3 bits (75), Expect = 0.081
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVKRATPK 674
G +++ + D +GF F+TF S + +GGK VD KRA P+
Sbjct: 94 GPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 148
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +2
Query: 200 RKLFVGGLSWETTDKEL 250
RKLF+GGLS +TTD++L
Sbjct: 70 RKLFIGGLSHDTTDEQL 86
Score = 30.7 bits (66), Expect = 0.99
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 442 KIFVGGLSSQISDDEIRNFFSE 507
K+F+GGLS +D+++ N+FS+
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQ 92
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
F YGE+ +IN+ D +TG+S+GFAF+ +K S ++A N + + + H
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV--DNFNGISLHKRMIRVDH 113
Query: 439 GKIFVGGLSSQISDDEIRNFFSE 507
+ + + +DDE + + E
Sbjct: 114 VEEYKVPKYKEDADDETKRLWEE 136
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 244 GAPCHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 357
G F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 332 GLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 381
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 244 GAPCHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 357
G F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 272 GLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 381
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 244 GAPCHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 357
G F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 269 GLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 381
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 208
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 244 GAPCHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 357
G F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 332 GLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 381
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 357
HF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 362 HFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 357
HF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 362 HFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 360
F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 122 FDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 360
F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 122 FDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 360
F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 122 FDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE-HTINNKKVTPKKAKAR 435
F G+I + + DP +G SRG+AF+ + E + H I+ K
Sbjct: 220 FEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIA 279
Query: 436 HGKIFVGGLSSQISDDEI 489
+ ++F+G + S DEI
Sbjct: 280 NTRLFIGNIPKTKSKDEI 297
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 411
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 412 TPKKAKARHGKIFVGGLSSQISDDEIRNFFSE 507
+ R K+F+G LS + +++ +R F++
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAK 164
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 411
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 412 TPKKAKARHGKIFVGGLSSQISDDEIRNFFSE 507
+ R K+F+G LS + +++ +R F++
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAK 164
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 411
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 412 TPKKAKARHGKIFVGGLSSQISDDEIRNFFSE 507
+ R K+F+G LS + +++ +R F++
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAK 164
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 411
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 412 TPKKAKARHGKIFVGGLSSQISDDEIRNFFSE 507
+ R K+F+G LS + +++ +R F++
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAK 164
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 411
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 412 TPKKAKARHGKIFVGGLSSQISDDEIRNFFSE 507
+ R K+F+G LS + +++ +R F++
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAK 164
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 411
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 412 TPKKAKARHGKIFVGGLSSQISDDEIRNFFSE 507
+ R K+F+G LS + +++ +R F++
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAK 164
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 411
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 412 TPKKAKARHGKIFVGGLSSQISDDEIRNFFSE 507
+ R K+F+G LS + +++ +R F++
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAK 164
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
+F G + +K + G S+GF F+ + +KV+A +H I+ ++ K R
Sbjct: 192 YFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGR 250
Query: 436 H-------GKIFVGGLSSQISDDEIRNFFSE 507
+IFVG L+ ++ + ++R F +
Sbjct: 251 DKQGRPSISRIFVGRLTDKVDEHQLRKVFGD 281
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 489 QKLLQ*IGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRPIGGKDVDVK 659
QK + IGT++ E+ K+ KGF F+ S N +L P+ I G+ DVK
Sbjct: 190 QKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVK 245
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 322 RGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
RGFAF+ + E+ +++++ G T+N V A+ R
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 271 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 408
G +E++ + D +TG+ +GFAF+ FK S+ +A TI +K
Sbjct: 271 GPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALSMETIKMEK 314
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +1
Query: 334 FIVFKAPESIDKVMAAG-----EHTINNKKVTPKKAK-ARHGKIFVGGLSSQISDDEIRN 495
++ F A ES++K + +H I KV KK + + IFVG L +I++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 496 FFS 504
FFS
Sbjct: 265 FFS 267
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 408
+F +G+IE V TD NT +SRG+ F+ K S ++ I+ +K
Sbjct: 54 YFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRK 104
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 411
HF G++ + + D TG + FAF+ F+ ES+ + N+K+
Sbjct: 65 HFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRKI 116
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK--KVTPKK 423
HF G + + ++ D +G +GFA++ F E + +A + + + KV PK+
Sbjct: 97 HFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 35.1 bits (77), Expect = 0.046
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 375
F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 25 FSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 34.7 bits (76), Expect = 0.061
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 360
F YGE+ + V D TG +GFA + F PE+
Sbjct: 299 FKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHT-INNKKVTPKKAK 429
F YG+I ++K G+ RGFAF+ F S +A T N+KK+T ++ +
Sbjct: 23 FEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAKSNQTFFNSKKLTVEECR 79
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 34.7 bits (76), Expect = 0.061
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVF 345
+F A G + ++ + D TGR RGFAF+ F
Sbjct: 25 YFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 244
Query: 439 GK------IFVGGLSSQISDDEIRNFFSE 507
GK +FVGGL S + ++ F E
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGE 273
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 244
Query: 439 GK------IFVGGLSSQISDDEIRNFFSE 507
GK +FVGGL S + ++ F E
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGE 273
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 166 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 221
Query: 439 GK------IFVGGLSSQISDDEIRNFFSE 507
GK +FVGGL S + ++ F E
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAFGE 250
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 363
F A G + + + TD TGRS+G ++ F ES+
Sbjct: 45 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 363
F A G + + + TD TGRS+G ++ F ES+
Sbjct: 190 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAAGEHTINNKKV-----TPK 420
F + GEIES + D TG+S G+ F+ + + +++ V + + NK + P
Sbjct: 62 FTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPS 121
Query: 421 KAKARHGKIFVGGLSSQISDDEIRNFF 501
+ + ++V G+ ++ E+ + F
Sbjct: 122 NDQIKGSNLYVSGIPKSMTLHELESIF 148
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 357
FG +GEI ++ D +G SRGF FI F E
Sbjct: 96 FGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEH 390
F +G+I + D TG +G AF+ + K +++ M
Sbjct: 49 FEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPA 108
Query: 391 TINNKKVTPKKAKARHGKIFVGGLSSQISDDEIRNFFS 504
+++ +PK K K+F+G LS Q S+DE+R F+
Sbjct: 109 DTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFA 145
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 161 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRVI 259
D A + DD+KLF+G LS + ++ E+R +
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRAL 143
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVF 345
+F G + ++ + D TGR RGFAF+ F
Sbjct: 23 YFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEHTI-------- 396
F +GE+ V D T +S+G+ F+ F ++ + +A G+ +
Sbjct: 155 FTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARK 214
Query: 397 ----NNKKVTPKK----AKARHGKIFVGGLSSQISDDEIRNFFS 504
N K+T ++ KA + ++VG +S Q +D ++R+ FS
Sbjct: 215 NSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFS 258
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 259 FGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKVTPKKAKA 432
F A+G I + + D ++G S+GFAFI F + E+ D + A + N+ +T A
Sbjct: 120 FSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFK 179
Query: 433 RHGK 444
R K
Sbjct: 180 RDSK 183
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Frame = +1
Query: 271 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVTPKKAKARH--- 438
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 96
Query: 439 ---GKIFVGGLSSQISDDEIRNFFS 504
IFVG L ++ + + + FS
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFS 121
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKR-PIGGKDVDVKRAT 668
G ++ V MP D+ +GF F+ F E + +K + GK + V +A+
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKAS 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 259 FGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKVTPKKAKA 432
F A+G I + + D ++G S+GFAFI F + E+ D + A + N+ +T A
Sbjct: 130 FSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFK 189
Query: 433 RHGK 444
R K
Sbjct: 190 RDSK 193
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Frame = +1
Query: 271 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVTPKKAKARH--- 438
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 106
Query: 439 ---GKIFVGGLSSQISDDEIRNFFS 504
IFVG L ++ + + + FS
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFS 131
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 510 GTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKR-PIGGKDVDVKRAT 668
G ++ V MP D+ +GF F+ F E + +K + GK + V +A+
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKAS 100
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEH 390
F +G+I + D TG +G AF+ + K +++ M
Sbjct: 49 FEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPA 108
Query: 391 TINNKKVTPKKAKARHGKIFVGGLSSQISDDEIRNFFS 504
+++ +PK K K+F+G LS Q S+DE+R F+
Sbjct: 109 DTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFA 145
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 161 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRVI 259
D A + DD+KLF+G LS + ++ E+R +
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRAL 143
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 179 APGRDDDRKLFVGGLSWETTDKELRVILE 265
APG +D R +FV L + TT+ E+R +E
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQAIE 614
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVTPKKAKAR 435
F AYG + S+ + T N S+GF F+ + ES +K AA E + + + ++A
Sbjct: 71 FFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPT 128
Query: 436 HGKI 447
K+
Sbjct: 129 RRKL 132
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVTPKKAKAR 435
F AYG + S+ + T N S+GF F+ + ES +K AA E + + + ++A
Sbjct: 71 FFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPT 128
Query: 436 HGKI 447
K+
Sbjct: 129 RRKL 132
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 378
FG G + I + D TG +GFAF+ F++ + + +A
Sbjct: 196 FGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 507 IGTILEVEMPFDKTKNQRKGFCFITFES 590
IG ++ + + DK KGF F+TFES
Sbjct: 199 IGRVIRIFIARDKVTGLPKGFAFVTFES 226
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/84 (21%), Positives = 33/84 (39%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
HFG++ + + N + R K+ + + A HT+ +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 436 HGKIFVGGLSSQISDDEIRNFFSE 507
K+FVGG+S ++ I FF +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQ 227
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/84 (21%), Positives = 33/84 (39%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
HFG++ + + N + R K+ + + A HT+ +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 436 HGKIFVGGLSSQISDDEIRNFFSE 507
K+FVGG+S ++ I FF +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQ 227
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/84 (21%), Positives = 33/84 (39%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKAR 435
HFG++ + + N + R K+ + + A HT+ +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 436 HGKIFVGGLSSQISDDEIRNFFSE 507
K+FVGG+S ++ I FF +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQ 227
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 442 KIFVGGLSSQISDDEIRNFFS 504
K+FVGGL S + + +I NFFS
Sbjct: 89 KVFVGGLPSCVKESDILNFFS 109
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +1
Query: 247 APCHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG----EHTINNKKVT 414
A C G YG++ + + DP +G A + F ++ + ++ H NNK+V
Sbjct: 382 ARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAENNKRVE 441
Query: 415 PK 420
K
Sbjct: 442 IK 443
>AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical
protein Y110A2AL.5 protein.
Length = 246
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 238 CGLPAQPTNKKFSVVIASWGFSTVMILRITATVLCISIKLVVGG 107
C P QP + S+V+ W F+ + R A CI L + G
Sbjct: 143 CPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCIGKGLKLTG 186
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 205
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 80 NNDNFXEDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 205
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHT 393
F YG+I++I++ D TG +G+A + ++ + ++ + T
Sbjct: 75 FSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDT 119
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 98 EDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
+D+ N+ N ++ + GGDS + E DDD
Sbjct: 415 DDVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 98 EDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 199
+D+ N+ N ++ + GGDS + E DDD
Sbjct: 431 DDVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 167 NSAEAPGRDDD--RKLFVGGLSWETTDKELR 253
N AE P +D R LFVG +++ET++ +LR
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLR 121
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 628 LLGVLSKSFTTGSDSNVMKQKPFLWFFVLSKGISTSKI 515
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -1
Query: 670 GVARFTSTSFPPIGLLGVLSKSFTTGSDSNVMKQKPFLWFFVLSKGI 530
G + + + F I GVL +F+ G+ S+V+ +KP + F LS GI
Sbjct: 78 GKSAYLKSLFSQIQFAGVLCGTFSFGAVSDVVGRKP-VAVFALSLGI 123
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 437 CRALAFFGVTFLLLMVCSPAAMTLSIDSGALNTMKANPRDLPV 309
C + F G+T L LM +P + L I SGA+ K + LPV
Sbjct: 213 CLSALFSGLT-LGLMSLTPQELELVIKSGAIKEQKCAAKILPV 254
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -1
Query: 670 GVARFTSTSFPPIGLLGVLSKSFTTGSDSNVMKQKPFLWFFVLSKGI 530
G + + + F I GVL +F+ G+ S+V+ +KP + F LS GI
Sbjct: 78 GKSAYLKSLFSQIQFAGVLCGTFSFGAVSDVVGRKP-VAVFALSLGI 123
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 319 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVTPKKAKARH 438
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +1
Query: 442 KIFVGGLSSQISDDEIRNFFSEL 510
+++VGG S+ +S ++IRN ++L
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQL 32
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 445 IFVGGLSSQISDDEIRNFFSE 507
+FVG +S +S+D IR+ FS+
Sbjct: 20 VFVGNISYDVSEDTIRSIFSK 40
>Z68161-10|CAN86582.1| 705|Caenorhabditis elegans Hypothetical
protein F20C5.1d protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 355 ESIDKVMAAGEHTINNKKVTPKKAKARHGKIFVGGLSSQISDDEI 489
ES+D V EHT++N K T + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical
protein F20C5.1b protein.
Length = 764
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 355 ESIDKVMAAGEHTINNKKVTPKKAKARHGKIFVGGLSSQISDDEI 489
ES+D V EHT++N K T + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical
protein F20C5.1a protein.
Length = 781
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 355 ESIDKVMAAGEHTINNKKVTPKKAKARHGKIFVGGLSSQISDDEI 489
ES+D V EHT++N K T + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 555 QRKGFCFITFESEPVVNDLLK-TPKR 629
Q KG+ FITFE+E ++ K TPK+
Sbjct: 104 QSKGYGFITFETEDQAEEIRKLTPKQ 129
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 256 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 375
HF G+I + D T + + FA+I F SI+ +
Sbjct: 74 HFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF 345
F YG+I +++ D + +S+GF F+ F
Sbjct: 39 FERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 259 FGAYGEIESINVKTDPNTGRSRGFAFIVF 345
F YG+I +++ D + +S+GF F+ F
Sbjct: 39 FERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 short form protein.
Length = 764
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 355 ESIDKVMAAGEHTINNKKVTPKKAKARHGKIFVGGLSSQISDDEI 489
ES+D V EHT++N K T + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 long form protein.
Length = 781
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 355 ESIDKVMAAGEHTINNKKVTPKKAKARHGKIFVGGLSSQISDDEI 489
ES+D V EHT++N K T + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 296 RQIQTQADHEGLPSLCLR 349
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 555 QRKGFCFITFESEPVVNDLLK-TPKR 629
Q KG+ FITFE+E ++ K TPK+
Sbjct: 105 QSKGYGFITFETEDQAEEIRKLTPKQ 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,158,233
Number of Sequences: 27780
Number of extensions: 308285
Number of successful extensions: 1159
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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