Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0295
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 134 8e-33
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 81 2e-16
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 75 9e-15
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 73 5e-14
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 60 2e-10
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 54 2e-08
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 46 5e-06
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 36 0.005
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 36 0.007
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 32 0.065
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.15
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.46
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 28 1.1
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 2.4
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 27 2.4
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 3.2
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 3.2
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 3.2
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 26 5.6
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 5.6
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 7.4
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 25 9.8
SPBC119.06 |sco1||copper chaperone Sco1|Schizosaccharomyces pomb... 25 9.8
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 134 bits (325), Expect = 8e-33
Identities = 60/84 (71%), Positives = 74/84 (88%)
Frame = +1
Query: 256 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 435
DF EFLTMMARKMKDTD+EEE+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+ EEV +
Sbjct: 66 DFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVAD 125
Query: 436 MIREADIDGDGQVNYEEFVTMMTS 507
MIREAD DGDG +NYEEF +++S
Sbjct: 126 MIREADTDGDGVINYEEFSRVISS 149
Score = 106 bits (254), Expect = 3e-24
Identities = 50/62 (80%), Positives = 55/62 (88%)
Frame = +2
Query: 77 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTK 256
LT+EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADGNGT
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 257 TF 262
F
Sbjct: 66 DF 67
Score = 66.9 bits (156), Expect = 2e-12
Identities = 33/75 (44%), Positives = 49/75 (65%)
Frame = +1
Query: 277 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 456
M R + D + E REAF +FD+D +G I++ EL VM +LG+ T E+ +MI E D
Sbjct: 1 MTTRNLTD-EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDA 59
Query: 457 DGDGQVNYEEFVTMM 501
DG+G +++ EF+TMM
Sbjct: 60 DGNGTIDFTEFLTMM 74
Score = 61.3 bits (142), Expect = 1e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 65 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 244
M D EE++ +EAF +FDKDG+G IT +EL V+ SLG+ ++ E+ DMI E D DG
Sbjct: 78 MKDTDNEEEV---REAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDG 134
Query: 245 NG 250
+G
Sbjct: 135 DG 136
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 95 AEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNG 250
AE ++ + D DG+GTI E T+M R + E E+++ D DGNG
Sbjct: 48 AELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNG 100
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 80.6 bits (190), Expect = 2e-16
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +1
Query: 256 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 435
D +F++ ++ K+++T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV
Sbjct: 59 DEKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQL 118
Query: 436 MIREADIDGDGQVNYEEFV 492
M++EAD G +Y +FV
Sbjct: 119 MVQEADPTNSGSFDYYDFV 137
Score = 56.8 bits (131), Expect = 3e-09
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2
Query: 80 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTKT 259
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+ D K
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL-GDAIDEKK 62
Query: 260 FPS 268
F S
Sbjct: 63 FMS 65
Score = 45.6 bits (103), Expect = 6e-06
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +2
Query: 59 STMADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 235
S ++++L E E E+ +AF +FDKD G I T + M++LG+ ++ E+Q M+ E D
Sbjct: 65 SFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEAD 124
Query: 236 ADGNGT 253
+G+
Sbjct: 125 PTNSGS 130
Score = 35.5 bits (78), Expect = 0.007
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +1
Query: 304 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 483
+ +E++EAF ++D D +G I + + V+ +LG +TD E+ ++ E D + +
Sbjct: 6 EQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNELG-DAIDEKKFM 64
Query: 484 EFVT 495
FV+
Sbjct: 65 SFVS 68
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 74.9 bits (176), Expect = 9e-15
Identities = 34/86 (39%), Positives = 52/86 (60%)
Frame = +1
Query: 244 KRHEDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 423
K + +F+ +M K+ + D EEI+ AF +FD D G IS LR V L E + D+
Sbjct: 87 KGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQ 146
Query: 424 EVDEMIREADIDGDGQVNYEEFVTMM 501
E++ MI E D+D DG++N +EF+ +M
Sbjct: 147 ELEAMIEEFDLDQDGEINEQEFIAIM 172
Score = 51.2 bits (117), Expect = 1e-07
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +2
Query: 74 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 250
++TEEQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKG 88
Score = 50.0 bits (114), Expect = 3e-07
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +1
Query: 304 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 483
+ ++I EAF++FD D + I ELR M LG EV +++R+ D G G + E
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 484 EFVTMMT 504
+FV +MT
Sbjct: 94 DFVRVMT 100
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 72.5 bits (170), Expect = 5e-14
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 DFPEFLTMMARKMK-DTDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 429
D +FL ++ R D + EE + F+VFDKD G I ELR+V+T+LGEKL++EE+
Sbjct: 56 DMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEM 115
Query: 430 DEMIREADIDGDGQVNYEEFVTMMTSS 510
DE+++ + DG VNY +FV M+ ++
Sbjct: 116 DELLKGVPVK-DGMVNYHDFVQMILAN 141
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 101 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 241
+K+AFSLFD+ G G I +G ++R+ GQNPT AE+ ++ + + A+
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE 54
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 98 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 232
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 122
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +1
Query: 322 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 501
++AF +FD+ G G I + ++ G+ T E+ E+ E+ + +V+ E+F+ ++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI--ESTL--PAEVDMEQFLQVL 64
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 60.5 bits (140), Expect = 2e-10
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Frame = +1
Query: 256 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 420
DF EF+ ++ + EE+++ AF+++D D +G+IS EL V+ TNL E
Sbjct: 74 DFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQ 133
Query: 421 EEVDEMIREADIDGDGQVNYEEFVTMMTSSEPPASV 528
+ VD+ I E D D DG++++EEF +++ S +S+
Sbjct: 134 QIVDKTIMEVDKDRDGKISFEEFKDIVSGSNVTSSM 169
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 74 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 235
QLT QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E + M ++
Sbjct: 41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESIN 94
Score = 43.2 bits (97), Expect = 3e-05
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +1
Query: 268 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 447
FLT M + ++ EAF FD +G I + +R ++++G+++ +EV+ ++R
Sbjct: 102 FLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILR- 160
Query: 448 ADIDGDGQVNYEEFVTMMTSSE 513
G YE+FV + S+
Sbjct: 161 -SYTSHGVFYYEKFVDAIAGSK 181
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = +1
Query: 313 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 492
+E++EAF + DKDG+G I +++ ++T+L + +++ ++ M + +N F+
Sbjct: 48 QELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESI----NPPINLAAFL 103
Query: 493 TMMTS 507
T M S
Sbjct: 104 TAMGS 108
Score = 29.9 bits (64), Expect = 0.34
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 364 ISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVTMMTSSEPPAS 525
++A + + +LT ++ E+ +EA D DGDG + E+ TM+TS AS
Sbjct: 26 VAAQAAKRASSGAFAQLTSSQIQEL-KEAFALLDKDGDGNIGREDVKTMLTSLNQDAS 82
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 107 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 244
EAFS FD G I + + S+G E++ ++ + G
Sbjct: 121 EAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSYTSHG 166
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 280 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 459
M+ K + +EE EAF +FD G+I +LR LGE LT E++ M+ D+
Sbjct: 1 MSVSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLA 57
Query: 460 G-DGQVNYEEFVTM 498
G +G+V+ EEF +
Sbjct: 58 GTNGKVSREEFAEL 71
Score = 33.5 bits (73), Expect = 0.028
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 86 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 244
E E +EAF LFD G I ++L LG+N T+ +LQ M++ +G
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGTNG 61
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 35.9 bits (79), Expect = 0.005
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 280 MARKMKDTDSEE--EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 453
+ +K + +EE + + F D DG G++ + +K + +EV E IRE +
Sbjct: 6 LQKKYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVN 64
Query: 454 IDGDGQVNYEEFV 492
+D G+V E+FV
Sbjct: 65 VDSSGRVEPEDFV 77
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 35.5 bits (78), Expect = 0.007
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +1
Query: 298 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 477
D + + E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +
Sbjct: 2 DPQEKNKYWEIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFD 58
Query: 478 YEEFVTMM 501
++EF M
Sbjct: 59 FDEFAIAM 66
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 32.3 bits (70), Expect = 0.065
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Frame = +1
Query: 256 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE------KLT 417
DF EF+ ++ + + +++ AF+++D D NG IS E+ ++ + + KL
Sbjct: 81 DFKEFICALSVTSRG-ELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLP 139
Query: 418 DEE------VDEMIREADIDGDGQVNYEEF 489
++E V+++ D + DGQ+ EEF
Sbjct: 140 EDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +1
Query: 331 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 501
F VFD D NG+I E ++ ++++ + D+D +G ++Y+E + ++
Sbjct: 69 FNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.15
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -1
Query: 465 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 331
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.46
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 465 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 319
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 71 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 232
D+ E A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 538 DETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 388 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 486
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 283 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 459
AR++K I + ++ D+ + +A EL V LG+ +TD VDE +A+++
Sbjct: 113 ARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEV---LGQNMTDINVDEEELDAELE 168
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +1
Query: 340 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 453
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 215 LEVRLLWGSVLATSSRCPALWS*WCHR 135
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +1
Query: 340 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 453
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 579 ISIVLDLHFSSVCDKLNTVIVSVRKFAR 662
+ I++DLH S+ KLN+ +V + F +
Sbjct: 836 VLILIDLHKSTYSKKLNSYVVPMETFVK 863
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 477 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 376
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 107 EAFSLFDKDGDGTITTKELGTVMR 178
+ F FD+D DG + +EL + R
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFR 334
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.0 bits (52), Expect = 9.8
Identities = 19/82 (23%), Positives = 33/82 (40%)
Frame = +2
Query: 26 FFSVAPDNPS*STMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 205
FF++ D + A++ T + F E+F + D + SL + T
Sbjct: 845 FFTIKADESAAQATANRETHGRQKLF-ESFGVLDSSNSVADSDSTNYDDENSLNRGGTSE 903
Query: 206 ELQDMINEVDADGNGTKTFPSS 271
+ I +VD +G+ FP S
Sbjct: 904 SDSEFIWDVDESNSGSIVFPKS 925
>SPBC119.06 |sco1||copper chaperone Sco1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 263
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 421 EEVDEMIREADIDGD--GQVNYEEFVTMMTSSEPPASVCVKAENLN 552
+E+D+M DI + G V Y F+T + +PP + E+ N
Sbjct: 136 DELDKMSAAIDIVNNVVGDVVYPIFITCDPARDPPQEMAEYLEDFN 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,223,307
Number of Sequences: 5004
Number of extensions: 38825
Number of successful extensions: 166
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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