Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0293
(637 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 95 4e-20
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026... 95 4e-20
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 82 3e-16
06_03_0085 + 16431503-16431568,16431981-16432152,16432402-164324... 50 2e-06
07_01_1064 + 9385330-9385432,9386181-9386236,9386938-9387082,938... 46 3e-05
06_03_0086 + 16458881-16458952,16461795-16461966,16462621-164628... 46 3e-05
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 46 3e-05
04_01_0036 + 436592-437572 44 8e-05
04_01_0035 - 433848-434372,434905-435381 44 8e-05
01_01_0929 - 7344911-7345978 34 0.11
03_01_0183 - 1474202-1474276,1474511-1474627,1474791-1474847,147... 32 0.44
04_01_0033 + 391565-391974,393484-393520,394959-395483 31 1.0
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 30 1.3
03_06_0033 - 31186076-31186189,31186274-31186396,31186524-311867... 30 1.3
06_03_1242 - 28618752-28618980,28619457-28619797 30 1.8
10_08_0736 + 20205934-20206551,20207258-20207426,20207562-202076... 29 2.3
03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759 29 2.3
01_07_0311 + 42667114-42667132,42667336-42667367,42667449-426678... 29 2.3
10_01_0320 + 3506183-3507109 29 3.1
07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331 29 4.1
02_01_0575 - 4264136-4264200,4264589-4264652,4264760-4264879,426... 29 4.1
09_04_0350 + 16899076-16900164 28 7.1
04_03_0696 + 18797316-18797720 28 7.1
05_05_0091 + 22319411-22320901 27 9.4
01_01_0148 - 1337494-1338057 27 9.4
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/102 (44%), Positives = 61/102 (59%)
Frame = +1
Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 477
DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A +LKAG+W R Y G
Sbjct: 146 DNVDLQAATEAGCLVVNAPTANTVAAAEHAIALLAAMARNVAQADASLKAGKWQRNKYVG 205
Query: 478 SELAGKTLAILALAXXGREVATRMYAFGMNIIGFDPFVSADQ 603
L GKTLAI+ G EVA R GM+II DP+ D+
Sbjct: 206 VSLVGKTLAIMGFGKVGSEVARRAKGLGMDIISHDPYAPVDR 247
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +2
Query: 80 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDEA 259
+VL+ + +G ELL + +++ EEL ++ DALVVRSAT+VT+EV + A
Sbjct: 73 TVLVTEKLGDAGLELLRRFANVDCAY-ELTAEELRAKVSLVDALVVRSATRVTREVFEAA 131
>04_04_1392 +
33201015-33201600,33202030-33202406,33202528-33202638,
33202720-33202815,33202899-33203570
Length = 613
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/102 (43%), Positives = 63/102 (61%)
Frame = +1
Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 477
DN+D+ +A + G V+NAP AN ++A E L+ ++R++ A +LKAG+W R Y G
Sbjct: 146 DNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMSRNIAQADASLKAGKWQRNKYVG 205
Query: 478 SELAGKTLAILALAXXGREVATRMYAFGMNIIGFDPFVSADQ 603
L GKT+AIL G EVA R GM++I DP+ SAD+
Sbjct: 206 VSLVGKTIAILGFGKVGSEVARRAKGLGMHVIAHDPYASADR 247
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +2
Query: 80 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLD 253
+VL+ + +GA ELL + + +S EEL +IP DAL+VRS T+V ++V +
Sbjct: 73 TVLVAEKLGAAGLELLRGFANVDCSYG-LSPEELRAKIPLCDALIVRSGTKVGRDVFE 129
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 82.2 bits (194), Expect = 3e-16
Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 12/114 (10%)
Frame = +1
Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKA---------- 447
DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A ALKA
Sbjct: 152 DNVDLQAATEAGCLVVNAPTANTVAAAEHGIALLASMARNVSQADAALKAVYSRTLTVFT 211
Query: 448 --GRWDRALYTGSELAGKTLAILALAXXGREVATRMYAFGMNIIGFDPFVSADQ 603
G+W R Y G L GKTLA++ G EVA R GM++I DP+ AD+
Sbjct: 212 AQGKWQRTKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADR 265
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 164 ISKEELLMEIPNHDALVVRSATQVTKEVLD 253
+S ELL ++ DAL+VRS T+VT+EVL+
Sbjct: 106 MSPAELLAKVAQFDALIVRSGTKVTREVLE 135
>06_03_0085 +
16431503-16431568,16431981-16432152,16432402-16432464,
16432792-16433332,16433419-16433543,16433988-16434100,
16434565-16434678
Length = 397
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LY 471
D+ID+ +A G+ V G+N +S E +L+L R+ +P + G W+ A Y
Sbjct: 144 DHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVVHGEWNVAGIAY 203
Query: 472 TGSELAGKTLAILALAXXGREVATRMYAFGMNIIGFD 582
+L GKT+ + GR + R+ F N++ D
Sbjct: 204 RAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHD 240
>07_01_1064 +
9385330-9385432,9386181-9386236,9386938-9387082,
9387126-9387298,9388058-9388129,9388222-9388336,
9388418-9388521,9388604-9388645,9388932-9389144,
9389621-9389689
Length = 363
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = +1
Query: 304 IDVDSAGKKGVGVINAPGA---NALSACELTCTLMLVLARHVVPASTALKAGRWDRALYT 474
+DV++A + + V PG+ NA+S E+ L L + R TA+K R D +
Sbjct: 118 VDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQKVMDTAVK--RKDLGIPV 175
Query: 475 GSELAGKTLAILALAXXGREVATRMYAFGMNII 573
G + GK++ IL G E+A R+ FG+ I+
Sbjct: 176 GDTIFGKSVLILGFGAIGVEIAKRLRPFGVKIL 208
>06_03_0086 +
16458881-16458952,16461795-16461966,16462621-16462889,
16463045-16463316,16463409-16463533,16463852-16463964,
16464579-16464692
Length = 378
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LY 471
D+ID+ +A G+ V G+N +S E +L+L R+ +P + G W+ A +
Sbjct: 125 DHIDLPAAAAAGLTVAEITGSNTVSVAEDQLMRILLLLRNFLPGHHQIVNGEWNVAGIAH 184
Query: 472 TGSELAGKTLAILALAXXGREVATRMYAFGMNIIGFD 582
+L GKT+ + GR + R+ F N++ D
Sbjct: 185 RTYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLMYHD 221
>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
Length = 454
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +1
Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRW-DRALYT 474
D +D+D+ ++GV V N P +L L + R + A ++AG+W + +T
Sbjct: 81 DRVDLDACLRRGVRVTNTPDVLTDDVADLAVGLAIAALRKIPQADRYVRAGKWKSKGDFT 140
Query: 475 -GSELAGKTLAILALAXXGREVATRMYAF 558
+ +GK + IL L G VA R AF
Sbjct: 141 LTTRFSGKRVGILGLGRIGLAVAKRAEAF 169
>04_01_0036 + 436592-437572
Length = 326
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = +1
Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAG-----RWDR 462
++ID+ ++GV V NA G + + L+L + RHV ++ G R
Sbjct: 85 NHIDLRECARRGVQVANAGGIYSTDVADYAVGLLLDVLRHVSAGDRFVRRGLCPEQRGGD 144
Query: 463 ALYTGSELAGKTLAILALAXXGREVATRMYAFG 561
L GS++ G+ + I+ L G +A R+ AFG
Sbjct: 145 FLPLGSKIGGRRVGIIGLGSIGSAIARRLEAFG 177
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWD-RALYT 474
D+ID+ ++GV V A + + L++ + R + + ++ G W R Y
Sbjct: 96 DHIDLAECARRGVAVAGAGTVFSTDVADHAVGLLVDVLRRISASDRYVRRGLWAARGDYP 155
Query: 475 -GSELAGKTLAILALAXXGREVATRMYAFGMNI 570
GS+L+GK + I+ L G +A R+ AFG I
Sbjct: 156 LGSKLSGKHVGIIGLGSIGSLIAKRLQAFGCTI 188
>01_01_0929 - 7344911-7345978
Length = 355
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -2
Query: 597 SRHERVESDDVHAEGVHPSGHLAAXXCQGQDGEGLASELAASVQSPVPPASLQRSGSWDH 418
SRH + D V P A +G+ G G+A L P PPA++ + W +
Sbjct: 267 SRHAMHDGDAVEVRAFRPPAWQARLESRGEGGLGMALLLRRPRGQPTPPAAVNDAAFWSY 326
>03_01_0183 -
1474202-1474276,1474511-1474627,1474791-1474847,
1475149-1475196,1475313-1476101,1476516-1476646,
1476769-1476937,1477954-1478541
Length = 657
Score = 31.9 bits (69), Expect = 0.44
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 403 VLARHVVPASTALKAGRW---DRALYTGSELA-GKTLAILALAXXGREVATRMYAFGMNI 570
+L+RH A A+ AG W + + G G L I+ + R +ATR AF M++
Sbjct: 130 LLSRHASSAPAAVAAG-WLGSVQPMCRGMRRCRGLVLGIIGRSAAARCLATRSLAFRMDV 188
Query: 571 IGFDPFVSAD 600
+ FDP SA+
Sbjct: 189 LYFDPRHSAN 198
>04_01_0033 + 391565-391974,393484-393520,394959-395483
Length = 323
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/88 (23%), Positives = 42/88 (47%)
Frame = +1
Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 477
D+ID+ ++GV V N+ + + +++ + R V +A + G
Sbjct: 92 DHIDLAECARRGVVVANSGTVYSGDVADHAVGMVIDVMRRV----SAAERGYCMEKGIAE 147
Query: 478 SELAGKTLAILALAXXGREVATRMYAFG 561
++++GK + I+ L G +A R+ AFG
Sbjct: 148 TQVSGKRVGIIGLGNIGSLIAKRLEAFG 175
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 421 VPASTALKAGRWDRALYTGSELAGKTLAILA 513
VP +TAL +WD+ YTGS G+ + A
Sbjct: 184 VPETTALLEQKWDKIFYTGSGNVGRIVMAAA 214
>03_06_0033 -
31186076-31186189,31186274-31186396,31186524-31186718,
31186805-31186930,31187024-31187186,31187270-31187405,
31187557-31187916,31188026-31188124,31188222-31188489
Length = 527
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 600 ISRHERVESDDVHAEGVHPSGHLAAXXCQGQDGEGLASELAASVQSPVPPA 448
I+ E + DD + + AA C G GL A+S + P PP+
Sbjct: 149 IASAEACQDDDPPGKAEESNAAAAADECCSSSGGGLKESAASSTRPPFPPS 199
>06_03_1242 - 28618752-28618980,28619457-28619797
Length = 189
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -3
Query: 572 MMFMPKAYILVATSRPXLAKARMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNIN 393
M P + T RP + A VLPA R + L +A EA +T R ++
Sbjct: 1 MALAPTSLRCFLTGRPLCSAGSTAAVLPAPKPTRRRPSARLSCRAANEAPST---RGDLP 57
Query: 392 VQVSSHALSALAPGAL 345
V++ A+ ALA G L
Sbjct: 58 VKLGKLAMVALAAGVL 73
>10_08_0736 +
20205934-20206551,20207258-20207426,20207562-20207692,
20208100-20208144,20208145-20208939,20209081-20209128,
20209504-20209620,20210087-20210161
Length = 665
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 490 GKTLAILALAXXGREVATRMYAFGMNIIGFDPFVSAD 600
G L I+ + R +ATR AF M+++ FDP A+
Sbjct: 172 GLVLGIVGVNAAARCLATRSLAFSMSVLYFDPLHEAN 208
>03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759
Length = 417
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +1
Query: 442 KAGRWDRALYTGSELAGKTLAILALAXXGREVATRMYAFGMNIIGFDPFVSADQCASSI 618
KAGRW R+ G + GK +A A G + ++F + G A A +
Sbjct: 3 KAGRWLRSFLAGGKKGGKKGEAMAAALPGEAAKEKRWSFRRPVHGEKAAAEAAAAADGV 61
>01_07_0311 +
42667114-42667132,42667336-42667367,42667449-42667822,
42667895-42668028,42668147-42668303,42668994-42669098,
42669342-42669645,42670404-42670478,42671467-42672589,
42673686-42673727,42674017-42674111,42674199-42674239,
42674375-42674414
Length = 846
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 509 RMARVLPASSLPVYR-ARSHLPAFSAVEAGTTWRARTNINVQV 384
+M RV A SLP+ + ARS + SA++AG WR ++ +
Sbjct: 395 KMLRVKIAHSLPLDQIARSIIRGLSALKAGRIWRVGNGSSIDI 437
>10_01_0320 + 3506183-3507109
Length = 308
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -2
Query: 483 LAASVQSPVPPASLQRSGSWDH--VASQNQHQRAGQLA-RAQRIGARSVDHSDAL 328
+AA +P PPAS +R+ + DH AS++ A A R +R SVD + L
Sbjct: 1 MAAPAPAPAPPASRKRAAAPDHEPTASRSSTPAAAAGAKRPRRYALASVDDYEQL 55
>07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331
Length = 599
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 467 RARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPG-ALITPTPFLPA 318
R R LPA AVE TT++ +++ A +A PG + P P PA
Sbjct: 345 RIREALPATPAVETPTTYQQIEEALMRLELAAAAARTPGDDTLLPQPMSPA 395
>02_01_0575 -
4264136-4264200,4264589-4264652,4264760-4264879,
4264906-4265002,4265365-4265437,4265534-4265630,
4265736-4266007,4266114-4266240,4266902-4267139,
4267508-4267620,4267722-4267762,4268569-4268788
Length = 508
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 504 GEGLASELAASVQSPVPPASLQRSG-SWDHVASQNQHQRAGQ 382
G +S +S QSP PP + SG + H AS NQ ++G+
Sbjct: 49 GGSASSSQESSSQSPPPPRGHRGSGDNTAHFASNNQFNQSGK 90
>09_04_0350 + 16899076-16900164
Length = 362
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 483 ARWQDPRHPGLGKXRPRGGH*DVRLRHEHHRIR 581
AR Q R G+ R R G + R+R HHRIR
Sbjct: 4 ARLQPRRRGASGRPRRRCGE-EQRIRRRHHRIR 35
>04_03_0696 + 18797316-18797720
Length = 134
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 361 NALSACELTCTLMLVLARHVVPASTALK--AGRWDRALYTGSELA-GKTLAILALAXXGR 531
NA +AC L+ +VPA++A K AG+ D A T +E A G T+A A G
Sbjct: 4 NAATACSTLLLLIAAATTLLVPAASAAKLVAGK-DAATATAAEAALGSTVAPWVEADAGG 62
Query: 532 EVATRM 549
V M
Sbjct: 63 VVGGMM 68
>05_05_0091 + 22319411-22320901
Length = 496
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 369 ERVRADLHVDVGSGSPRGPSFHCAEGWQVGPGSVHWQR 482
+R L +++ S S HC + WQ P V W++
Sbjct: 283 QRRDVPLRIEMSSNSCPIIRSHCQQPWQTSPPGVDWRK 320
>01_01_0148 - 1337494-1338057
Length = 187
Score = 27.5 bits (58), Expect = 9.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 466 EPGPTCQPSAQWKLGP 419
+PG +C PS++W GP
Sbjct: 109 DPGTSCAPSSEWPWGP 124
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,420,353
Number of Sequences: 37544
Number of extensions: 355198
Number of successful extensions: 1570
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -