Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0293
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical pr...   115   2e-26
U53341-1|AAC69110.3|  727|Caenorhabditis elegans Hypothetical pr...    51   6e-07
AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical ...    32   0.30 
Z49131-6|CAA88979.1|  297|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p...    29   3.7  
Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical pr...    29   3.7  
L12018-4|AAK68342.1|  456|Caenorhabditis elegans Dnaj domain (pr...    29   3.7  
L12018-3|AAK68343.1|  446|Caenorhabditis elegans Dnaj domain (pr...    29   3.7  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z95559-1|CAB08999.1|  289|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical
           protein C31C9.2 protein.
          Length = 322

 Score =  115 bits (277), Expect = 2e-26
 Identities = 54/102 (52%), Positives = 72/102 (70%)
 Frame = +1

Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 477
           DNIDV +A    + V+N P AN+ SA ELTCTL+L L+RHV  A+ ++KAG+W R  + G
Sbjct: 81  DNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASMKAGKWARKDFMG 140

Query: 478 SELAGKTLAILALAXXGREVATRMYAFGMNIIGFDPFVSADQ 603
            E+ G+TLA+L L   G EVA R+ AFGM +IGFDP V+ +Q
Sbjct: 141 EEVYGRTLAVLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQ 182



 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +2

Query: 62  MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTK 241
           M   I  VLI D +  +C ++L   GI  T K K +K+ELL+ +P HDA++VRSAT++T 
Sbjct: 1   MSAPINKVLIADDIEQECVDILKQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITA 60

Query: 242 EVL 250
           E+L
Sbjct: 61  ELL 63


>U53341-1|AAC69110.3|  727|Caenorhabditis elegans Hypothetical
           protein F49E10.5 protein.
          Length = 727

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
 Frame = +1

Query: 298 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR----HVVPASTALKAGRWD-- 459
           DNIDV +A + G+ V +APG       + T +L+L L R    H    S   K    D  
Sbjct: 254 DNIDVKAATELGIAVCHAPGDYVEDVADSTLSLILDLFRRTYWHAKSYSETRKTIGADQV 313

Query: 460 RALYTGSE-LAGKTLAILALAXXGREVATRMYAFGMNIIGFDPFV 591
           R    GS+ + G  L IL     G  V  R  AFG++II +DPFV
Sbjct: 314 RENAVGSKKVRGSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFV 358


>AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4a protein.
          Length = 607

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
 Frame = -3

Query: 620 AMELAH*SADTKGSNPMMFMPKAYILVATSRPXLAKARMARVLPASSLPVYRARSHLPAF 441
           A +L+    D  G   +  +   Y+L+  +      +R+AR LPA  LP    R++L   
Sbjct: 131 ARKLSGSCEDQCGVQHLAILAFWYLLLGVAHRKSGLSRLARGLPAPPLPEGLHRTNLSVI 190

Query: 440 SAVEAGTTWRARTNINVQVSSHALSAL-APGALITPTPFLPAES 312
            A  A    ++   I + +    L+ L +PGA  T  P  P  +
Sbjct: 191 GATSAQPE-KSEAEIALSLPVPPLTPLPSPGAQSTAPPVFPTST 233


>Z49131-6|CAA88979.1|  297|Caenorhabditis elegans Hypothetical
           protein ZC373.7 protein.
          Length = 297

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 484 ARCQCTEPGPTCQPSAQWKLGPRGEP 407
           A CQC    PTC P      GP G+P
Sbjct: 92  AWCQCEPTKPTCPPGPPGPPGPAGQP 117


>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
            C47E8.8 protein.
          Length = 1675

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -2

Query: 597  SRHERVESDDVHAEGVHP 544
            S H R+E+DD+  EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493


>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
            protein C47E8.8 protein.
          Length = 1675

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -2

Query: 597  SRHERVESDDVHAEGVHP 544
            S H R+E+DD+  EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493


>Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical
           protein C30F2.1 protein.
          Length = 307

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 478 CQCTEPGPTCQPSAQWKLGPRGEPEPT 398
           CQC    P C P      G RGEP P+
Sbjct: 100 CQCEPIRPKCPPGPPGPPGCRGEPGPS 126


>L12018-4|AAK68342.1|  456|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 10, isoform a
           protein.
          Length = 456

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -2

Query: 624 WCNGTGALISRHERVESDDVHAEGVHPSGHLAAXXCQGQDGEG 496
           +CNGTGA+  R +              SGH     CQ  +GEG
Sbjct: 210 YCNGTGAVSQRLQGGFFYQTTCNRCRGSGHYNKNPCQECEGEG 252


>L12018-3|AAK68343.1|  446|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 10, isoform b
           protein.
          Length = 446

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -2

Query: 624 WCNGTGALISRHERVESDDVHAEGVHPSGHLAAXXCQGQDGEG 496
           +CNGTGA+  R +              SGH     CQ  +GEG
Sbjct: 210 YCNGTGAVSQRLQGGFFYQTTCNRCRGSGHYNKNPCQECEGEG 252


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -1

Query: 469 TEPGPTCQPS-AQWKLGPRGEPEPTSTCRSARTRSAHWR 356
           T  GPT +P+ A W+ G  G    TS   + R  +A WR
Sbjct: 390 TSRGPTHRPTTAGWRNGANGTTRDTSRGFTQRPTTAGWR 428


>Z95559-1|CAB08999.1|  289|Caenorhabditis elegans Hypothetical
           protein Y41E3.2 protein.
          Length = 289

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 478 CQCTEPGPTCQPSAQWKLGPRGEP 407
           C+ T P P CQP  Q   GP G+P
Sbjct: 127 CEPTTP-PPCQPCPQGPPGPPGQP 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,209,160
Number of Sequences: 27780
Number of extensions: 250042
Number of successful extensions: 1173
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)