BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0292
(629 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein. 27 0.37
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 26 0.86
AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced ... 24 4.6
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 23 6.1
>DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein.
Length = 409
Score = 27.5 bits (58), Expect = 0.37
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 523 SEAESPEIERRSIHNDMERQRRIGLKNLFD 612
+E + P + +I+N + RR+GL+NLF+
Sbjct: 257 TEVQLPYFTQTTIYNMTQSIRRLGLQNLFE 286
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 26.2 bits (55), Expect = 0.86
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 130 RDSAAVAADHSYTLARQH-RDYLGVQTPSDSGESEEE 237
R S+A DH Y+L +++ R + +Q D+G EE
Sbjct: 474 RQSSAFEQDHVYSLVKENQRIIMMLQPTKDNGPKSEE 510
>AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced
homeotic protein protein.
Length = 372
Score = 23.8 bits (49), Expect = 4.6
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +2
Query: 314 SGNVGSCCFNARSASGPATVRIRDVSHAPLAAPPDRTEAA 433
SGN + ++ + + + + R+ + PLA+P + +EA+
Sbjct: 193 SGNPSTAVSSSSTNNNTSNISNRNQVNLPLASPEEESEAS 232
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 23.4 bits (48), Expect = 6.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 193 LGVQTPSDSGESEEEIDVVS 252
LGV +DSGE + +DVV+
Sbjct: 216 LGVLHSTDSGEGQRLVDVVN 235
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,171
Number of Sequences: 2352
Number of extensions: 8163
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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