Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0290
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   4.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   8.0  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    20   8.0  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    20   8.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
 Frame = -3

Query: 269 FCFFSVFPASSPXCAGRSFFGLVSVFCLVSSNF---LANSSAVANFFTAF 129
           FC F +F      C    FF +  +F L    F   L     +  F++AF
Sbjct: 170 FCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAF 219


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = -3

Query: 350 FRGSVAALQHLNLEPGVVFYRFFILLPFCFFSVFPASSPXCAGRSFFGLVSVFCLVSSNF 171
           ++ S      + +   V ++  FI+L   FF    A SP       F L+ +  +   NF
Sbjct: 27  YKNSNVNYSKIGIVQTVAYFVIFIILTIVFFEKRSALSP-------FELIQIRTI---NF 76

Query: 170 LANSSAVAN 144
           +A    +AN
Sbjct: 77  VATFRTIAN 85


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/33 (27%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -1

Query: 139 SLLLIFYDLFLRRNR--LNRPSSILTKIFVLCF 47
           S+ +IF+D+F + ++  L+   + +T +F L +
Sbjct: 176 SIYIIFFDMFYQHHKIVLDMGKNCVTYVFDLFY 208


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 248 PASSPXCAGRSFFGLVSVFCL 186
           PAS   C G +   ++S+ CL
Sbjct: 233 PASRSSCLGSNTSSMLSLNCL 253


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 248 PASSPXCAGRSFFGLVSVFCL 186
           PAS   C G +   ++S+ CL
Sbjct: 22  PASRSSCLGSNTSSMLSLNCL 42


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 248 PASSPXCAGRSFFGLVSVFCL 186
           PAS   C G +   ++S+ CL
Sbjct: 22  PASRSSCLGSNTSSMLSLNCL 42


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 248 PASSPXCAGRSFFGLVSVFCL 186
           PAS   C G +   ++S+ CL
Sbjct: 233 PASRSSCLGSNTSSMLSLNCL 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,976
Number of Sequences: 336
Number of extensions: 979
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)