Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0290
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            26   0.60 
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    25   0.79 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   7.4  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    22   7.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    22   9.8  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.8 bits (54), Expect = 0.60
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 181 DTKQKTETRPKKERPAQXG-EEAGKTEKKQNGRSMKNR 291
           D KQK +    K  PA  G EE  +  +K+ G+  K+R
Sbjct: 222 DAKQKQKQDDTKALPAAGGKEEETRQWRKEGGKQSKSR 259


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 25.4 bits (53), Expect = 0.79
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 184 TKQKTETRPKKERPAQXGEEAGKTEKKQNGR 276
           TK   E  PKK+ PA+  E   K E++   R
Sbjct: 88  TKAYREPAPKKQAPAKAKEPKAKAERQSTLR 118


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 339  GAPEAGRDATAEAPAMDSTKTK 404
            G  E+   A  E P  DST+T+
Sbjct: 1021 GVAESAEHAMFECPRFDSTRTE 1042


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 6/33 (18%), Positives = 22/33 (66%)
 Frame = +1

Query: 169 KKLEDTKQKTETRPKKERPAQXGEEAGKTEKKQ 267
           ++ +  +Q+ + RP+++RP Q   +  ++++++
Sbjct: 460 RQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRK 492


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 12/54 (22%), Positives = 26/54 (48%)
 Frame = +1

Query: 178  EDTKQKTETRPKKERPAQXGEEAGKTEKKQNGRSMKNR*KTTPGSRFRCCKAAT 339
            ++ K+K E +P+K +      +  +  ++ +G    +  +   GSR R  K A+
Sbjct: 935  KERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGAS 988


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 295,804
Number of Sequences: 2352
Number of extensions: 3518
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)