Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0288
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   4.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.4  

>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 578 SYINCIACEGWSDARAEALKRD 513
           +YI+CI  +G      E LKRD
Sbjct: 42  NYIDCILGKGKCTPEGEELKRD 63


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 313 QALHFLHQAHHRYRRHPLH 369
           Q+++  H  HH   +HP H
Sbjct: 160 QSMNNHHMGHHMQEQHPQH 178


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 313 QALHFLHQAHHRYRRHPLH 369
           Q+++  H  HH   +HP H
Sbjct: 162 QSMNNHHMGHHMQEQHPQH 180


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +2

Query: 584 VFVMCSEHTILPVVANARDWC 646
           + ++ + HTIL  +     WC
Sbjct: 67  ILLILNVHTILTTITKRNQWC 87


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +2

Query: 584 VFVMCSEHTILPVVANARDWC 646
           + ++ + HTIL  +     WC
Sbjct: 67  ILLILNVHTILTTITKRNQWC 87


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +2

Query: 584 VFVMCSEHTILPVVANARDWC 646
           + ++ + HTIL  +     WC
Sbjct: 387 ILLILNVHTILTTITKRNQWC 407


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,727
Number of Sequences: 336
Number of extensions: 2950
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)