Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0288
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 49 4e-06
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 42 4e-04
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 31 0.009
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 29 0.025
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 28 0.043
12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156 34 0.13
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 33 0.18
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729... 31 0.94
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 31 1.2
08_02_1145 - 24674319-24674403,24674691-24674746,24674885-246749... 31 1.2
07_01_0611 + 4524866-4525047,4525406-4525468,4525701-4525761,452... 30 1.6
01_06_0541 - 30088910-30089107,30089421-30089477,30089563-300897... 30 1.6
12_01_0442 + 3495333-3496484 29 2.9
07_03_0944 + 22787933-22789906 29 2.9
07_01_0427 + 3255857-3255922,3257061-3257180,3257382-3257403,325... 29 3.8
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 3.8
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 29 3.8
03_05_0786 + 27691451-27691688,27692376-27692479,27692600-276926... 28 6.6
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 28 6.6
01_06_1748 + 39632040-39632065,39632748-39633051,39633147-396331... 28 6.6
04_04_0490 + 25603540-25603591,25603612-25604105,25604184-25604870 28 8.7
04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915,171... 28 8.7
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 8.7
02_05_0748 - 31463559-31464764 28 8.7
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII---TQGGVTYKN 194
WH +CF C C PI F E + Y CY+D F +C C I G + Y+
Sbjct: 277 WHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPKCDVCKNFIPTNRNGLIEYRA 336
Query: 195 EPW 203
P+
Sbjct: 337 HPF 339
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 CVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQ-GGVTYKNEPWHRECF 218
C CKNPIG F+ ++ C+ RC CNK I++ ++++P+H+ C+
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCF------RCFACNKPISEYEFAMHEDQPYHKSCY 309
Score = 35.1 bits (77), Expect = 0.058
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 296 FGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQC 421
F ++ C C PI G RF+S D WH CF C C
Sbjct: 249 FASSGSRTCAGCKNPI---GHGRFLSCMDSVWHPQCFRCFAC 287
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 144 CVKCNKIITQGG-VTYKNEPWHRECFTCTNCNTSLA 248
C C I G ++ + WH +CF C CN ++
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPIS 292
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII---TQGGVTYKN 194
WH +CF C C PI F Y CY+++F +C C + I G + Y+
Sbjct: 578 WHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPKCDVCKQFIPTNMNGLIEYRA 637
Query: 195 EPW 203
P+
Sbjct: 638 HPF 640
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +2
Query: 305 LFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 484
+F+ +C + IG RF+S WH +CF C C + F G C
Sbjct: 550 MFSSGFRTCAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTC 609
Query: 485 AKQK 496
K++
Sbjct: 610 YKER 613
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 144 CVKCNKIITQGG-VTYKNEPWHRECFTCTNCN 236
C C+ I G ++ WH ECF C CN
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACN 589
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 138 TRCVKCNKII-TQGGVTYKNEPWHRECFTCTNCNTSL 245
T+C+ C+K + +T N +H+ CF C +C +L
Sbjct: 10 TKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTL 46
Score = 29.5 bits (63), Expect(2) = 0.009
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 141 RCVKCNKIITQ-GGVTYKNEPWHRECFTC 224
+CV CNK + VT N +H+ CF C
Sbjct: 109 KCVGCNKTVYPIERVTVNNTMYHKSCFKC 137
Score = 27.5 bits (58), Expect(2) = 0.009
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKF 134
R +H+ CF C CK + ++ E +YC ++ F
Sbjct: 30 RVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLF 68
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 29.5 bits (63), Expect(2) = 0.025
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKF 134
+H+ CF C CK + S+ + +YC +E F
Sbjct: 30 YHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTHFEQLF 66
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 141 RCVKCNKIITQGGV-TYKNEPWHRECFTCTNCNTSLA 248
+C C+K + + T + P+H+ CF C++C +L+
Sbjct: 9 KCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLS 45
Score = 25.8 bits (54), Expect(2) = 0.025
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 141 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTN 230
+C C K + +T + E +HR CF C +
Sbjct: 103 KCTACKKTVYPLEKMTMEGECYHRTCFKCAH 133
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 141 RCVKCNKIITQGGV-TYKNEPWHRECFTCTNCNTSLA 248
+C C+K + + T P+H+ CF C++C L+
Sbjct: 9 KCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILS 45
Score = 28.3 bits (60), Expect(2) = 0.043
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKF 134
+H+ CF C CK + S+ + +YC +E F
Sbjct: 30 YHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLF 66
Score = 26.2 bits (55), Expect(2) = 0.043
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 141 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTN 230
+C C K + +T + E +H+ CF C++
Sbjct: 104 KCAACQKTVYPLEKLTLEGESYHKSCFKCSH 134
>12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156
Length = 598
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 203 APRVLHVHELQHVARRPGFTSRDEKPYCAECFGELFAKRCTSCTKP--ITGIGGT--RFI 370
A R +H H L + R F+S + + C G+L RCT+ P + +GGT +F
Sbjct: 525 AIRAVHHHPLTLLERIQNFSSDESRYLVISCSGKLLMIRCTTKYSPDGSSSMGGTTIKFK 584
Query: 371 SFEDRHW 391
FE W
Sbjct: 585 VFEADFW 591
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 320 CTSCTKPITGIGGTRFISFEDRHWHNDCFICAQC 421
C C PI G RF+S D WH CF C C
Sbjct: 178 CAGCKTPI---GQGRFLSCMDSVWHPQCFRCFAC 208
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 144 CVKCNKIITQGG-VTYKNEPWHRECFTCTNCNTSLA 248
C C I QG ++ + WH +CF C C+ ++
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPIS 213
>12_01_0796 +
7292523-7292783,7292963-7293018,7295274-7295331,
7295777-7295843,7296461-7296516,7296638-7296691,
7296836-7296961
Length = 225
Score = 31.1 bits (67), Expect = 0.94
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 373 VRRQTLAQRLLHLRAVQDLARRQGLHHRRTGHHLSRVRQAE 495
V+ + L L HLR A R+G HH HH RVR+AE
Sbjct: 11 VQERRLGVLLSHLRPCAPPAARRGNHHHH--HHDLRVREAE 49
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 45 CVVCKNPIGTKSFIPREQEIYCAGC---YEDKFATRCVKCN 158
CV+CK + ++ C GC +E+K RC CN
Sbjct: 656 CVICKREEACVILLQCAHQVLCVGCNKRHEEKGVARCPCCN 696
>08_02_1145 -
24674319-24674403,24674691-24674746,24674885-24674965,
24675063-24675137,24675418-24675479,24675857-24675950,
24676674-24676762,24676864-24677194
Length = 290
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 445 ALADERGLALRADEAVVVPVSVFE-RDEAGAADTCDGLGARSAALGEQFPEALGAV 281
A + GL + V+V VS R +A AA C G GA SAA G Q P G V
Sbjct: 20 AASSSSGLTFKLHPLVIVNVSDHHTRVKAQAA--CSGDGASSAAAGGQPPRVFGCV 73
>07_01_0611 +
4524866-4525047,4525406-4525468,4525701-4525761,
4526212-4526304,4526372-4526489,4527003-4527105,
4527342-4527525,4527974-4528087
Length = 305
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = -1
Query: 484 ALGTDDVLSVGDEALADERGLA----LRADEAVVVPV--SVFERDEAGAADTCDGLGARS 323
ALG D++ V DE L DE GLA ++A E V ++++EA AA G +
Sbjct: 185 ALGEDEMPDVKDETLPDEEGLARPVVVKAVEEFKASVYGENYDQEEAEAAAAKAGASKKR 244
Query: 322 AALGEQFPEALGA 284
AL + E A
Sbjct: 245 KALTDAAAEKSAA 257
>01_06_0541 -
30088910-30089107,30089421-30089477,30089563-30089721,
30090639-30090777,30090863-30091247,30091612-30091816
Length = 380
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -1
Query: 538 RERKR*SETGYLHELLLGALGTDDVLSVGDEALADERGLALRADEAVVVPVSVFERDEA- 362
R +R S TG +E+ G + + DEALA E AL+ +E+ + E+D+A
Sbjct: 163 RNYERHSGTGRGYEMKRDGAGRGNWGTATDEALAQETEEALKVEESAPIAEKQGEQDDAP 222
Query: 361 -GAADTCDG 338
G D +G
Sbjct: 223 TGEKDNKEG 231
>12_01_0442 + 3495333-3496484
Length = 383
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 87 PREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQGSLR 266
P E+E AG K A RC+ C+ + T +++ P R C C L GSL
Sbjct: 104 PGEEE---AGKRAAKRARRCLNCDAVETP---QWRSGPMGRSTL-CNACGVRLRAVGSLP 156
Query: 267 ATRSPTA 287
R+P A
Sbjct: 157 EHRAPAA 163
>07_03_0944 + 22787933-22789906
Length = 657
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 367 EAGAADTCDGLGARSAALGEQFPEALGAVGLLVARSEPWPA 245
E AAD DGL A GE+ E VGL RS+ + A
Sbjct: 29 ELAAADDVDGLRGALAEGGEEAAELADGVGLWYGRSKAYEA 69
>07_01_0427 +
3255857-3255922,3257061-3257180,3257382-3257403,
3257978-3258026,3259119-3259190,3259993-3260068,
3260823-3260894
Length = 158
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 342 MGLVQEVQRLANSSPKHSAQ*GFSSREVN 256
MGLV+E+QR+ S+P+ S + FS+ N
Sbjct: 107 MGLVEEIQRIKTSNPEISHREAFSAAAKN 135
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 141 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLA 248
+CV CNK + V +H+ CF CT+ +L+
Sbjct: 111 KCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLS 147
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 314 KRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL 433
++C SC + + + ++ + R +H CF C CK +L
Sbjct: 11 QKCDSCGRTVYPV---EELAADGRVYHRPCFRCTHCKATL 47
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYE 125
R +H CF C CK + ++ E +YC Y+
Sbjct: 31 RVYHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYD 66
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGG 179
+H+ CF C CK + ++ + +YC +E F +K +QGG
Sbjct: 30 YHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTHFEQLF-KETGSFSKKFSQGG 80
>03_05_0786 +
27691451-27691688,27692376-27692479,27692600-27692671,
27693231-27693404,27693603-27693726,27695154-27695200,
27695381-27695593
Length = 323
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -3
Query: 605 VRCTSQKHLSYINCIACEGWSDAR-AEALK 519
+RC S KHL I+ + CEGWS + A ALK
Sbjct: 279 LRCAS-KHLKDISGMDCEGWSLLKIATALK 307
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 350 IGGTRFISFEDRHWHNDCFICAQCK 424
IG ++S +WH CF C+ C+
Sbjct: 121 IGHGHYLSCLGMYWHPQCFRCSSCR 145
Score = 27.9 bits (59), Expect = 8.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPI 68
WH +CF C C++PI
Sbjct: 134 WHPQCFRCSSCRHPI 148
>01_06_1748 +
39632040-39632065,39632748-39633051,39633147-39633192,
39633228-39633314,39634083-39634285
Length = 221
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = -1
Query: 472 DDVLSVGDEALADERGLALRADEAVVVPVSVFERDE 365
+D + G+E A+E G+ +D+ +VP V+++++
Sbjct: 184 EDDFNSGEEDEANEEGIDFESDKDEIVPTKVYDQED 219
>04_04_0490 + 25603540-25603591,25603612-25604105,25604184-25604870
Length = 410
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 436 DERGLALRADEAVVVPVSVFERDEAGAADTCDGLGARSAALGEQFPEALGAVGL 275
++RG + A+E +V ++V + + T GL L E+FPEA G L
Sbjct: 67 EDRG-PVPAEEEIVSAMAVIRGETSSRTLTLGGLICEFEGLKEKFPEAYGTFQL 119
>04_01_0148 +
1710369-1710531,1711821-1712279,1712769-1712915,
1713004-1714170,1714378-1714430
Length = 662
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 465 SCPSVMKPLPTSEVLHCAQMKQSLCQCLSSNEMKRVPP 352
SC S+ P P + + C+ K+ L C S+ + +PP
Sbjct: 68 SCGSMSIPFPFALLSACSGSKRFLLNCTSNKTLIGIPP 105
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +3
Query: 141 RCVKCNKIITQGGVTYKNEPWHRECFTCTN----CNTSL 245
RC +C +++ + +EPW F CT+ C T L
Sbjct: 44 RCSECGQVLPESYEPPADEPWTTGIFACTDDPQTCRTGL 82
>02_05_0748 - 31463559-31464764
Length = 401
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 392 HNDCFICAQCKTSLVGKGFITDGQDII 472
HN+CF+C+ ++ VG + G++I+
Sbjct: 143 HNECFMCSDKESLAVGTELLVFGKEIL 169
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,349,554
Number of Sequences: 37544
Number of extensions: 360417
Number of successful extensions: 1324
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -