Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0288
(730 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 103 1e-22
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 97 1e-20
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 77 2e-14
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 68 9e-12
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 63 2e-10
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 60 2e-09
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 59 3e-09
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 49 4e-06
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 43 2e-04
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 42 7e-04
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 41 0.001
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 40 0.002
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 38 0.011
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 37 0.015
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 37 0.019
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 34 0.10
SB_15946| Best HMM Match : Extensin_2 (HMM E-Value=1) 33 0.24
SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09) 33 0.31
SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9) 32 0.55
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 31 0.72
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 31 0.96
SB_27224| Best HMM Match : RNase_P_p30 (HMM E-Value=5.9) 31 0.96
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 31 1.3
SB_35352| Best HMM Match : zf-C2H2 (HMM E-Value=0.0016) 31 1.3
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_12157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_38302| Best HMM Match : DIL (HMM E-Value=1.3) 30 2.2
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 29 3.9
SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38) 28 6.7
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 28 8.9
SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 103 bits (248), Expect = 1e-22
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = +3
Query: 3 MEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGV 182
+EY WHE CF C C IGT F+P++ +C GCY+ KF+ RC C + + +GGV
Sbjct: 416 LEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGV 475
Query: 183 TYKNEPWHRECFTCTNCNTSLA 248
Y E WH+ CF+C C+ SLA
Sbjct: 476 LYNGETWHKACFSCYFCHRSLA 497
Score = 79.4 bits (187), Expect = 3e-15
Identities = 30/77 (38%), Positives = 52/77 (67%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
F+ RD YC EC+G+ +AK+C C K I +GG + + E+ ++H +CF+C++C SL
Sbjct: 501 FSVRDGCRYCMECYGKFYAKQCEICLKAI--VGG-EYYTLEESNFHKECFMCSRCGRSLA 557
Query: 437 GKGFITDGQDIICPECA 487
+GF+ +G +++C +CA
Sbjct: 558 SEGFVREGDELLCGDCA 574
Score = 71.3 bits (167), Expect = 7e-13
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 9 YKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGG-VT 185
Y WH+ CF C C + + +F R+ YC CY +A +C C K I G T
Sbjct: 477 YNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIVGGEYYT 536
Query: 186 YKNEPWHRECFTCTNCNTSLAGQGSLR 266
+ +H+ECF C+ C SLA +G +R
Sbjct: 537 LEESNFHKECFMCSRCGRSLASEGFVR 563
Score = 70.5 bits (165), Expect = 1e-12
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKS-FIPREQEIYCAGCYEDKFATRCVKCNKIITQGG--VTY 188
R WH+KCF C +C+ P+ + F +I C CY + C C ++I G + Y
Sbjct: 359 RHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNCYVANYQKECFACGQMIDSGASRLEY 418
Query: 189 KNEPWHRECFTCTNCNTSLAGQG 257
WH CF C NC ++ G
Sbjct: 419 SGNFWHENCFRCANCGEAIGTSG 441
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
F R +KP C +CF + +A C +C + I G S +DRHWH+ CFIC C+ L
Sbjct: 318 FIVRGDKPVCTDCFKDSYAHECEACHQKI-GPESRDISSDDDRHWHDKCFICDICRRPLK 376
Query: 437 GKGFITDGQD-IICPEC 484
G T +D I+C C
Sbjct: 377 SDGKFTFYRDQILCNNC 393
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/77 (33%), Positives = 35/77 (45%)
Frame = +2
Query: 254 GFTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL 433
GF +D+ +C C+ F+KRC SC +P+ GG + + WH CF C C SL
Sbjct: 441 GFVPKDDTFFCPGCYQSKFSKRCASCGEPLLE-GG---VLYNGETWHKACFSCYFCHRSL 496
Query: 434 VGKGFITDGQDIICPEC 484
F C EC
Sbjct: 497 ASAAFSVRDGCRYCMEC 513
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNE 197
+ WH F C C + I + FI R + C C++D +A C C++ I ++
Sbjct: 297 KNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDSYAHECEACHQKIGPESRDISSD 356
Query: 198 P---WHRECFTCTNCNTSLAGQG 257
WH +CF C C L G
Sbjct: 357 DDRHWHDKCFICDICRRPLKSDG 379
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
FT ++ C C+ + K C +C + I G +R + + WH +CF CA C ++
Sbjct: 381 FTFYRDQILCNNCYVANYQKECFACGQMIDS-GASR-LEYSGNFWHENCFRCANCGEAIG 438
Query: 437 GKGFITDGQDIICPECAKQK 496
GF+ CP C + K
Sbjct: 439 TSGFVPKDDTFFCPGCYQSK 458
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 329 CTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECAK 490
C K + G ++ +++WH F C C S+ G+ FI G +C +C K
Sbjct: 280 CLKALLIFTGEYTVAM-NKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFK 332
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 GTKSFIPR-EQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSL 245
G K F + Y AG A C+K I T N+ WH F C C+ S+
Sbjct: 254 GAKPFYSAGAKPFYSAGAKPFYSAGPCLKALLIFTGEYTVAMNKNWHLGHFQCQTCDHSI 313
Query: 246 AGQ 254
G+
Sbjct: 314 TGR 316
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 103 bits (248), Expect = 1e-22
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = +3
Query: 3 MEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGV 182
+EY WHE CF C C IGT F+P++ +C GCY+ KF+ RC C + + +GGV
Sbjct: 4 LEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGV 63
Query: 183 TYKNEPWHRECFTCTNCNTSLA 248
Y E WH+ CF+C C+ SLA
Sbjct: 64 LYNGETWHKACFSCYFCHRSLA 85
Score = 79.4 bits (187), Expect = 3e-15
Identities = 30/77 (38%), Positives = 52/77 (67%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
F+ RD YC EC+G+ +AK+C C K I +GG + + E+ ++H +CF+C++C SL
Sbjct: 89 FSVRDGCRYCMECYGKFYAKQCEICLKAI--VGG-EYYTLEESNFHKECFMCSRCGRSLA 145
Query: 437 GKGFITDGQDIICPECA 487
+GF+ +G +++C +CA
Sbjct: 146 SEGFVREGDELLCGDCA 162
Score = 71.3 bits (167), Expect = 7e-13
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 9 YKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGG-VT 185
Y WH+ CF C C + + +F R+ YC CY +A +C C K I G T
Sbjct: 65 YNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIVGGEYYT 124
Query: 186 YKNEPWHRECFTCTNCNTSLAGQGSLR 266
+ +H+ECF C+ C SLA +G +R
Sbjct: 125 LEESNFHKECFMCSRCGRSLASEGFVR 151
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/77 (33%), Positives = 35/77 (45%)
Frame = +2
Query: 254 GFTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL 433
GF +D+ +C C+ F+KRC SC +P+ GG + + WH CF C C SL
Sbjct: 29 GFVPKDDTFFCPGCYQSKFSKRCASCGEPLLE-GG---VLYNGETWHKACFSCYFCHRSL 84
Query: 434 VGKGFITDGQDIICPEC 484
F C EC
Sbjct: 85 ASAAFSVRDGCRYCMEC 101
Score = 40.3 bits (90), Expect = 0.002
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 368 ISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECAKQK 496
+ + WH +CF CA C ++ GF+ CP C + K
Sbjct: 4 LEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSK 46
Score = 30.7 bits (66), Expect = 1.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 186 YKNEPWHRECFTCTNCNTSLAGQG 257
Y WH CF C NC ++ G
Sbjct: 6 YSGNFWHENCFRCANCGEAIGTSG 29
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 97.5 bits (232), Expect = 1e-20
Identities = 37/81 (45%), Positives = 53/81 (65%)
Frame = +3
Query: 9 YKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTY 188
Y+++ +H+KCF C CK PIG+K FI R++ C C++ KFA CVKCN++I V +
Sbjct: 192 YQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSSVQH 251
Query: 189 KNEPWHRECFTCTNCNTSLAG 251
+H ECFTC +C+ LAG
Sbjct: 252 AGSTYHSECFTCHHCDKPLAG 272
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGG---VTYKN 194
+H +CF C C P+ F +E C CY +++A RC C+ +I +G V Y
Sbjct: 256 YHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKRCGACHNLI-EGNTKFVAYDE 314
Query: 195 EPWHRECFTCTNCNTSLAGQ 254
+ +HRECFTC CN LAG+
Sbjct: 315 KYFHRECFTCCKCNKPLAGE 334
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
FT ++ + C C+ E +AKRC +C I G T+F++++++++H +CF C +C L
Sbjct: 275 FTKQEGRNVCQNCYRERYAKRCGACHNLIEG--NTKFVAYDEKYFHRECFTCCKCNKPLA 332
Query: 437 GKGF-ITDGQDIICP 478
G+ F I DG+ I P
Sbjct: 333 GEKFRIRDGEKICLP 347
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/101 (28%), Positives = 47/101 (46%)
Frame = +2
Query: 254 GFTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL 433
GFT +DEK C C G +K C +C G + + ++ + +H+ CFIC +CK +
Sbjct: 154 GFTLKDEKLICHGCRGINPSKVCAACNGDFAP--GEKKVGYQSKTFHDKCFICDECKQPI 211
Query: 434 VGKGFITDGQDIICPECAKQKLM*ITCLASTLPLSHRSIPH 556
K FI + +C C K + C+ + S+ H
Sbjct: 212 GSKQFIRRDERRLCNNCFDSKFAKV-CVKCNQVIKTSSVQH 251
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
F RDE+ C CF FAK C C + I T + +H++CF C C L
Sbjct: 216 FIRRDERRLCNNCFDSKFAKVCVKCNQVIK----TSSVQHAGSTYHSECFTCHHCDKPLA 271
Query: 437 GKGFITDGQDIICPECAKQK 496
G F +C C +++
Sbjct: 272 GSPFTKQEGRNVCQNCYRER 291
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 9 YKTRQWHEKCFC-CVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQG--G 179
Y R W EK C C+ + F +++++ C GC + C CN G
Sbjct: 132 YCCRHWGEKLKPRCAGCEEM--NEGFTLKDEKLICHGCRGINPSKVCAACNGDFAPGEKK 189
Query: 180 VTYKNEPWHRECFTCTNCNTSLAGQGSLR 266
V Y+++ +H +CF C C + + +R
Sbjct: 190 VGYQSKTFHDKCFICDECKQPIGSKQFIR 218
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPW 203
WH KCF C + + ++ EIYC + +K RC C ++ G T K+E
Sbjct: 105 WHVKCFTCEEDGELLVDLIYCSKDDEIYCCRHWGEKLKPRCAGCEEM--NEGFTLKDE-- 160
Query: 204 HRECFTCTNCNTS 242
C C N S
Sbjct: 161 KLICHGCRGINPS 173
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 76.6 bits (180), Expect = 2e-14
Identities = 31/80 (38%), Positives = 41/80 (51%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNE 197
+ WH + F CV C+ P+GT++F R+ + YC Y D FA RC CN I VT ++
Sbjct: 299 KTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRCAYCNGPILDSCVTALDQ 358
Query: 198 PWHRECFTCTNCNTSLAGQG 257
WH E F C C G
Sbjct: 359 TWHPEHFVCAECGNPFGDTG 378
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
F RD KPYC + + FA RC C PI ++ D+ WH + F+CA+C
Sbjct: 320 FFERDGKPYCERDYHDTFAPRCAYCNGPIL----DSCVTALDQTWHPEHFVCAECGNPFG 375
Query: 437 GKGF 448
GF
Sbjct: 376 DTGF 379
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRC 146
WH + F C C NP G F R+ + +C Y FA RC
Sbjct: 360 WHPEHFVCAECGNPFGDTGFHERDGKPFCREDYYAMFAPRC 400
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +3
Query: 144 CVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQGSLRATRSP 281
C CNK I T + WH E F C C L Q P
Sbjct: 282 CAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKP 327
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 254 GFTSRDEKPYCAECFGELFAKRC 322
GF RD KP+C E + +FA RC
Sbjct: 378 GFHERDGKPFCREDYYAMFAPRC 400
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 320 CTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFI-TDGQ 463
C +C KPI G T + WH + F C C+ L + F DG+
Sbjct: 282 CAACNKPIIGQVCTAL----GKTWHPEHFACVACEAPLGTQNFFERDGK 326
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 67.7 bits (158), Expect = 9e-12
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWH--NDCFICAQCKTS 430
+ RD KPYC CF L+A+ C SC +PI ++ +HWH N+CF C C +
Sbjct: 182 YVMRDNKPYCCHCFESLYAEFCDSCGEPIEPDASQ--MAHNGQHWHATNECFSCCTCGKA 239
Query: 431 LVGKGFITDGQDIIC-PECA 487
L+G F+ +I C P+C+
Sbjct: 240 LLGLPFLPKSGEIYCSPDCS 259
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGG--VTYKNE 197
WH + FCC C P+G ++ R+ + YC C+E +A C C + I + + +
Sbjct: 163 WHVQHFCCFECDCPLGGMRYVMRDNKPYCCHCFESLYAEFCDSCGEPIEPDASQMAHNGQ 222
Query: 198 PWH--RECFTCTNCNTSLAG 251
WH ECF+C C +L G
Sbjct: 223 HWHATNECFSCCTCGKALLG 242
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEP- 200
WH CF C CK + + ++ ++YC + + RC C++II T +
Sbjct: 103 WHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAETLKPRCAACDEIIFAEQCTEAEDSC 162
Query: 201 WHRECFTCTNCNTSLAGQGSLRATRSP 281
WH + F C C+ L G + P
Sbjct: 163 WHVQHFCCFECDCPLGGMRYVMRDNKP 189
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/73 (28%), Positives = 27/73 (36%)
Frame = +2
Query: 266 RDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKG 445
+D K YC E RC +C + I T ED WH F C +C L G
Sbjct: 125 KDSKVYCGRHHAETLKPRCAACDEIIFAEQCTEA---EDSCWHVQHFCCFECDCPLGGMR 181
Query: 446 FITDGQDIICPEC 484
++ C C
Sbjct: 182 YVMRDNKPYCCHC 194
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 3 MEYKTRQWH--EKCFCCVVCKNPIGTKSFIPREQEIYCA 113
M + + WH +CF C C + F+P+ EIYC+
Sbjct: 217 MAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYCS 255
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 320 CTSCTKPITGIGGTRFISFEDRH--WHNDCFICAQCKTSLVGKGFITDGQDIIC 475
C C + +T + S +H WH CFIC CK LV + + C
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYC 131
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Frame = +3
Query: 144 CVKCNKIITQGGVTY------KNEPWHRECFTCTNCNTSL 245
C +C + +T G + ++ WH CF CT C L
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELL 117
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 MEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKII--TQG 176
+ Y+ + H +CF C C+ P+ K+F R+ C C +A RCV C + I T
Sbjct: 14 VRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDCNRIHYAKRCVACRQYIEGTVK 73
Query: 177 GVTYKNEPWHRECFTCTNCNTSLAGQ 254
VT +H +CF C+ C LAG+
Sbjct: 74 FVTRDEGTYHSDCFVCSRCRKPLAGK 99
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQG--GVTYKNE 197
+H CF C C+ P+ K+F E C CY D++A RC C++ + V Y +
Sbjct: 82 YHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRYAKRCNMCHQSLEANVEFVKYDEK 141
Query: 198 PWHRECFTCTN--CNTSLAG 251
+H ECF C N C L+G
Sbjct: 142 LYHNECFVCQNPRCRKPLSG 161
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/76 (32%), Positives = 44/76 (57%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
F RD++ C +C +AKRC +C + I G +F++ ++ +H+DCF+C++C+ L
Sbjct: 40 FQMRDDRKVCKDCNRIHYAKRCVACRQYIEGT--VKFVTRDEGTYHSDCFVCSRCRKPLA 97
Query: 437 GKGFITDGQDIICPEC 484
GK F +C +C
Sbjct: 98 GKTFTEHEGSWVCDDC 113
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFIC--AQCKTS 430
FT + C +C+ + +AKRC C + + F+ ++++ +HN+CF+C +C+
Sbjct: 101 FTEHEGSWVCDDCYHDRYAKRCNMCHQSLEA--NVEFVKYDEKLYHNECFVCQNPRCRKP 158
Query: 431 LVGKGFI--TDGQDIICPEC 484
L G F +DG+ +C C
Sbjct: 159 LSGAKFALKSDGRR-MCLNC 177
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 144 CVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQ 254
C C K IT V Y+N+P H ECF C +C T LAG+
Sbjct: 2 CNSCFKTITSSVVRYQNKPHHSECFVCFHCRTPLAGK 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 320 CTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 484
C SC K IT + + ++++ H++CF+C C+T L GK F +C +C
Sbjct: 2 CNSCFKTIT----SSVVRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDC 52
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTY-KNEP 200
WH CF C VC N + + ++ IYC Y ++F RC C+++I T ++
Sbjct: 334 WHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAEQFKPRCAACDELIFSETYTQAEDRN 393
Query: 201 WHRECFTCTNCNTSLAGQ 254
WH+ F C C+ L GQ
Sbjct: 394 WHQRHFCCLECDRDLGGQ 411
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNE 197
R WH++ FCC+ C +G + ++ R + +C CY+ +A C+ C K I ++++
Sbjct: 392 RNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYYAKHCMSCKKNIAADAQRFEHQ 451
Query: 198 PWHRECFTCTNCNTSLAGQGSLRATR 275
F T TSL G+G+L A +
Sbjct: 452 V---AKFLITQYRTSLIGRGALIANK 474
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +2
Query: 266 RDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKG 445
+D YC + E F RC +C + I + EDR+WH F C +C L G+
Sbjct: 356 KDGVIYCGRHYAEQFKPRCAACDELIFS---ETYTQAEDRNWHQRHFCCLECDRDLGGQL 412
Query: 446 FITDGQDIICPEC 484
++ G C EC
Sbjct: 413 YVARGGQPHCLEC 425
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
+ +R +P+C EC+ + +AK C SC K I RF H F+ Q +TSL+
Sbjct: 413 YVARGGQPHCLECYDKYYAKHCMSCKKNIAA-DAQRF-----EH-QVAKFLITQYRTSLI 465
Query: 437 GKG 445
G+G
Sbjct: 466 GRG 468
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 305 LFAKRCTSCTKPI-TG-IGGTRFISFEDRHWHNDCFICAQCKTSLV 436
L C C+KP+ TG + + ED+ WH CF+C C LV
Sbjct: 304 LITMNCFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLV 349
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFI-PREQEIYCAGCYEDKFATRCVKCNKIITQGGVT--Y 188
R WH KC C +C + +G ++ ++ +IYC Y +F T+C +C + I
Sbjct: 120 RAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQFGTKCARCGRSIHANDWVRRA 179
Query: 189 KNEPWHRECFTCTNCNTSLA 248
KN +H CF C NC L+
Sbjct: 180 KNCVYHLACFACDNCKRQLS 199
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +2
Query: 263 SRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL-VG 439
++D K YC + F +C C + I R ++ +H CF C CK L G
Sbjct: 144 TKDGKIYCKADYARQFGTKCARCGRSIHANDWVR--RAKNCVYHLACFACDNCKRQLSTG 201
Query: 440 KGFITDGQDIIC 475
+ F ++C
Sbjct: 202 EEFALKDGHVLC 213
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 141 RCVKCN-KIITQGGVTYKNEPWHRECFTCTNCNTSLAGQGS 260
RCV C KI+ + V WH +C C C+ L + +
Sbjct: 101 RCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREAT 141
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 MEYKTRQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGV 182
M+ WHE C C +C++ + ++S +++++YC YE F T+C C K I +
Sbjct: 59 MKVVDEAWHESCLQCCICRSQL-SRSCFSKDRKLYCRTDYEKVFGTKCSGCKKTIPANEL 117
Query: 183 TYK--NEPWHRECFTCTNC 233
+ +H CF CT C
Sbjct: 118 VMRALGNVYHLHCFVCTMC 136
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +2
Query: 263 SRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL-VG 439
S+D K YC + ++F +C+ C K I + +H CF+C C L G
Sbjct: 86 SKDRKLYCRTDYEKVFGTKCSGCKKTIP--ANELVMRALGNVYHLHCFVCTMCGHILEKG 143
Query: 440 KGFITDGQDIIC 475
+ F + C
Sbjct: 144 QEFALKDNKLYC 155
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +2
Query: 320 CTSCTKPITGIGGTRFI-SFEDRHWHNDCFICAQCKTSLVGKGFITD 457
CT C +PI RF+ D WH C C C++ L F D
Sbjct: 46 CTGCNEPIED----RFLMKVVDEAWHESCLQCCICRSQLSRSCFSKD 88
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVT--YKNE 197
WH +C C CK P+ + F RE +++C + ++ T+C C++ I+ + K+
Sbjct: 25 WHAQCVQCSDCKCPLTERCF-SREGKLFCKTDFYRRYGTKCSGCDQGISPNDMVRRAKHL 83
Query: 198 PWHRECFTCTNCNTSL 245
+H +CF C+ C +
Sbjct: 84 VFHVDCFVCSYCKRQI 99
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 263 SRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL 433
SR+ K +C F + +C+ C + I+ R + +H DCF+C+ CK +
Sbjct: 45 SREGKLFCKTDFYRRYGTKCSGCDQGISPNDMVR--RAKHLVFHVDCFVCSYCKRQI 99
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 314 KRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQ 463
++C C PI + D WH C C+ CK L + F +G+
Sbjct: 3 QQCAGCQLPIAD---KFLLKVLDGVWHAQCVQCSDCKCPLTERCFSREGK 49
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 43.2 bits (97), Expect = 2e-04
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATR 143
++WH+ C C C + + + ++ EIYC GCY F +
Sbjct: 28 KKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNFGPK 69
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 141 RCVKCNKIITQGGVTYK-NEPWHRECFTCTNCNTSL 245
+C +C+K + + + WH+ C TC CN SL
Sbjct: 9 KCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSL 44
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = +2
Query: 314 KRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 484
++C C+K + I + WH C C C SL +I C C
Sbjct: 8 EKCPRCSKTVYKAEERLAIG---KKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGC 61
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGG 179
+ WH + F C C+ P + R+ YC Y + + C +CNK IT G
Sbjct: 98 KAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGDICFECNKAITGDG 151
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 8/84 (9%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGTKSF--------IPREQEIYCAGCYEDKFATRCVKCNKIITQGG 179
WH CF C +C + + F IP + I G + C C + +
Sbjct: 33 WHPDCFRCEICNDCLADTGFVKNAGSTYIPEGEHIMYMGDPVHPWHYNCFCCGRPVEDRV 92
Query: 180 VTYKNEPWHRECFTCTNCNTSLAG 251
V + WH E F C C G
Sbjct: 93 VHALGKAWHVEHFVCAKCEKPFYG 116
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 362 RFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPE 481
R I +WH DCF C C L GF+ + PE
Sbjct: 24 RVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGSTYIPE 63
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 201 WHRECFTCTNCNTSLAGQGSLRATRSPTAP 290
WH +CF C CN LA G ++ S P
Sbjct: 33 WHPDCFRCEICNDCLADTGFVKNAGSTYIP 62
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 281 YCAECFGELFAKRCTSCTKPITGIG 355
YC + EL+ C C K ITG G
Sbjct: 127 YCETHYNELYGDICFECNKAITGDG 151
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/70 (35%), Positives = 32/70 (45%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLV 436
F D +PYC + C SC KPITG R I+ R +H + F+CA C L
Sbjct: 4 FFDHDGRPYCEMHYHAKRGTLCYSCQKPITG----RCITAMHRKFHPEHFVCAFCLKQL- 58
Query: 437 GKGFITDGQD 466
KG + D
Sbjct: 59 NKGTFKEQND 68
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 78 SFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNC 233
SF + YC Y K T C C K IT +T + +H E F C C
Sbjct: 3 SFFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFC 54
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKC 155
+++H CF CVVC+ + T F R E+YC Y KF + C C
Sbjct: 29 KRFHNACFRCVVCEERLST-DFYARGSELYCKKDYLSKFNSVCHIC 73
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 272 EKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL-VGKGF 448
E+ YC + + + K+C SC + G IS +++H CF C C+
Sbjct: 3 EQYYCKDDYQNQYGKKCDSCQLYLEG----EIISIHGKNFHEACFACNSCRQPFPPSDKI 58
Query: 449 ITDGQDIICPEC 484
I G D +C C
Sbjct: 59 IFTGTDYLCQTC 70
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIIT 170
+QWH CF C C + + ++ + + YC Y++ F C CN IT
Sbjct: 107 KQWHLWCFSCTKCHCLLSLE-YMGMDGKPYCEKDYQELFGVTCAACNGYIT 156
Score = 35.1 bits (77), Expect = 0.059
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +3
Query: 96 QEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNC 233
++ YC Y++++ +C C + ++ + +H CF C +C
Sbjct: 3 EQYYCKDDYQNQYGKKCDSCQLYLEGEIISIHGKNFHEACFACNSC 48
Score = 34.7 bits (76), Expect = 0.078
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 12/89 (13%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIG-TKSFIPREQEIYCAGC----------YEDKFATRCVKCNKI 164
+ +HE CF C C+ P + I + C C + C C +
Sbjct: 36 KNFHEACFACNSCRQPFPPSDKIIFTGTDYLCQTCNNAPKAPTTKVSSPYLHTCAGCGEA 95
Query: 165 ITQGGVTYKNEP-WHRECFTCTNCNTSLA 248
I E WH CF+CT C+ L+
Sbjct: 96 IKGSQALLALEKQWHLWCFSCTKCHCLLS 124
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITG 349
+ D KPYC + + ELF C +C ITG
Sbjct: 127 YMGMDGKPYCEKDYQELFGVTCAACNGYITG 157
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 320 CTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECAK--Q 493
C C + I G ++ + ++ WH CF C +C L + DG+ P C K Q
Sbjct: 89 CAGCGEAIKG---SQALLALEKQWHLWCFSCTKCHCLLSLEYMGMDGK----PYCEKDYQ 141
Query: 494 KLM*ITCLA 520
+L +TC A
Sbjct: 142 ELFGVTCAA 150
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIGT--KSFIPREQEIYCAGCYEDKFATR--CVKCNKIITQGGVTY- 188
WHE C C C + +G S + I C Y F C CNK I +
Sbjct: 37 WHEGCLKCECCDSRLGDIGSSLYSKANLILCKRDYLRLFGIPGVCSHCNKPIAAFELVMR 96
Query: 189 -KNEPWHRECFTCTNCNTSL 245
+N +H ECF C C L
Sbjct: 97 ARNNAYHIECFGCQRCRKRL 116
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 320 CTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL-VGKGFITDGQDIIC-PECAKQ 493
C+ C KPI + + +H +CF C +C+ L VG+ F ++C CAK+
Sbjct: 81 CSHCNKPIAAF--ELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLCLDRCAKE 138
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 141 RCVKCNKIITQG-GVTYKNEPWHRECFTCTNCNTSL 245
+C KC+K + G +H+ CFTCT CN SL
Sbjct: 11 KCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSL 46
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 263 SRDEKPYCAECFGELFA-KRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL-V 436
S+D C E + F+ K+C+SC++ I+ + D+ +H +CF C +CK L
Sbjct: 290 SKDGVILCREDYYRRFSVKKCSSCSQAISS--KELVMRARDQVYHVNCFACDRCKRMLAT 347
Query: 437 GKGFITDGQDIICPE 481
G+ F G I C E
Sbjct: 348 GEYFGMRGIRIYCKE 362
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 380 DRHWHNDCFICAQCKTSLVGK--GFITDGQDIICPECAKQKLM*ITCLASTLPLSHRS-I 550
D+ WH DC C+ C+ L + F DG I+C E ++ C + + +S + +
Sbjct: 265 DQEWHADCLKCSDCELRLDNELTCFSKDGV-ILCREDYYRRFSVKKCSSCSQAISSKELV 323
Query: 551 PHTQYNLYMTNVF 589
+ +Y N F
Sbjct: 324 MRARDQVYHVNCF 336
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 MEYKTRQWHEKCFCCVVCKNPIGT-KSFIPREQEIYCAGCYED 128
M + + +H CF C CK + T + F R IYC YE+
Sbjct: 324 MRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCKEDYEE 366
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 320 CTSCTKPITGIGGTRFISFEDRHWHNDCFICAQC 421
C SC++PI ++S R+WH+DCF C C
Sbjct: 2031 CASCSQPIRKSMAV-YVSELKRYWHDDCFSCVVC 2063
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGT 74
R WH+ CF CVVC GT
Sbjct: 2051 RYWHDDCFSCVVCHVRFGT 2069
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 93 EQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEP---WHRECFTCTNCN 236
+ IY + D+ T C C++ I + Y +E WH +CF+C C+
Sbjct: 2015 DYSIYETFVHGDRNVT-CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVCH 2064
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Frame = +3
Query: 141 RCVKCNKIITQG-GVTYKNEPWHRECFTC--TNCNTSLAGQGSLRATRSPTAPSASG 302
RC +C+K+ G++ + WH+ CF C C L P P G
Sbjct: 296 RCGRCDKMCYHAEGISMAGKRWHKSCFACAEVRCRKKLESTNCCEGNGIPDKPGEGG 352
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 117 CYEDKFATRCVKC-NKIITQGGVTYKNEPWHRECFTCTNCNTSL 245
C D +C +C + + V+ +N +H++CF+C +C L
Sbjct: 36 CVADNMP-KCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKL 78
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 317 RCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCK 424
RC C K G IS + WH CF CA+ +
Sbjct: 296 RCGRCDKMCYHAEG---ISMAGKRWHKSCFACAEVR 328
>SB_15946| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 285
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 275 KPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQ--CKT 427
+P C C + A C +CT P+T + R + + + F C + CKT
Sbjct: 116 RPTCKTCTSPVTALTCKTCTFPVTALHARRVLHLSPPYMQDVYFTCHRPTCKT 168
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 275 KPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQ--CKT 427
+P+ + + C +CT P+T + R + + + FIC + CKT
Sbjct: 69 RPHMQDVYFTCHRPTCKTCTSPVTALHARRVLHLSPPYMQDVYFICHRPTCKT 121
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 278 PYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQ--CKT 427
PY + + C +CT P+T + R + + + F C + CKT
Sbjct: 152 PYMQDVYFTCHRPTCKTCTSPVTALHARRVLHLSPPYMQDVYFTCHRPTCKT 203
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 278 PYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQ--CKT 427
PY + + C +CT P+T + R + + + F C + CKT
Sbjct: 187 PYMQDVYFTCHRPTCKTCTSPVTALHARRVLHLSPPYMQDVYFTCNRPTCKT 238
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 278 PYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFIC--AQCKT 427
PY + + C +CT P+T + R + + + F C + CKT
Sbjct: 222 PYMQDVYFTCNRPTCKTCTSPVTALHARRVLHLSPPYMQDVYFTCHRSTCKT 273
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 257 FTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFI 370
FTS +P C C + A C +CT P+T + R +
Sbjct: 6 FTSH--RPTCKTCTFPVTALTCKTCTFPVTALHARRVL 41
>SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09)
Length = 765
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 45 CVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEP 200
C+VC+N T++ +P C C+ + ++C C ++I +T + EP
Sbjct: 688 CIVCQNLPVTRALLPCRHACVCGSCF-SRLESKCPLCRQVIRSYFLT-QEEP 737
>SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9)
Length = 229
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 275 KPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFIC 412
+P C C + A C +CT P+T + R + + + F C
Sbjct: 46 RPTCKTCTFPVIALTCKTCTSPVTALHARRVLHLSPPYMQDVYFTC 91
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 275 KPYCAECFGELFAKRCTSCTKPITGIGGTRFI 370
+P C C + A C +CT P+T + R +
Sbjct: 164 RPTCKTCTSPVTALTCKTCTSPVTALHARRVL 195
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 275 KPYCAECFGELFAKRCTSCTKPITGIGGTRFIS 373
+P C C + A C +CT P T + R +S
Sbjct: 105 RPTCKTCTSPVTALTCKTCTSPDTALHARRVLS 137
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 141 RCVKCNKIITQGGVTYKN-EPWHRECFTCTNCNTSL 245
+C +C K + N + WH+ C TC +CN L
Sbjct: 4 KCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRL 39
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 322 HFLHQAHHRYRRHPLHLVRRQTLAQRLLHLRAV 420
H H AH+ +RRH H RR+ +RL H V
Sbjct: 731 HHNHHAHYHHRRHHHHHHRRRRRRRRLRHNNVV 763
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 322 HFLHQAHHRYRRHPLHLVRRQTLAQRLLHLRAV 420
H H AH+ +RRH H RR+ +RL H V
Sbjct: 758 HHNHHAHYHHRRHHHHHHRRRRRRRRLRHNNVV 790
>SB_27224| Best HMM Match : RNase_P_p30 (HMM E-Value=5.9)
Length = 489
Score = 31.1 bits (67), Expect = 0.96
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Frame = +1
Query: 304 TVRQALHFLHQAHHRYRRHPLHLVR-RQTLAQRLLHLRAVQDLARRQGLH--HRRTGHHL 474
TVR+ L F H A H LHL+ R+ L +H + + L R+GLH R HL
Sbjct: 60 TVRKRLTFTHGAQRLTFTHGLHLLTVRKGLHLLTVH-KGLHLLTVRKGLHLLTVRKILHL 118
Query: 475 SRVRQAE-AHVNNLSRFNXXXXXXXXXXXXIQFIYDKC-----FCDVQRTYHTTGSR*RP 636
VR+A H F +IY +C V++ H +R
Sbjct: 119 LTVRKASITHGAQSLTFTHSAQSLDYSRCSKAYIYSRCAKGLHLLTVRKGLHLLTARKGL 178
Query: 637 RLVRVQKAGHL 669
L+ V+K HL
Sbjct: 179 HLLTVRKGLHL 189
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 144 CVKCNKIITQGGVTYK--NEPWHRECFTCTNCNTSL 245
C C K+I + K + +H CFTCT C+ L
Sbjct: 708 CAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQL 743
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +1
Query: 328 LHQAHHRYRRHPLH--LVRRQTLAQRLL-HLRAVQDLARRQGLHHRRTGHH 471
L+ HH Y HP H L+R + RLL H + R H+R HH
Sbjct: 996 LNYHHHHYHYHPFHYRLLRHHSFHYRLLRHHPFHYRVLRHHPFHYRVLRHH 1046
>SB_35352| Best HMM Match : zf-C2H2 (HMM E-Value=0.0016)
Length = 221
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 141 RCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLA 248
RC KC+KI + ++ H + + CT C+ + A
Sbjct: 184 RCNKCDKIFSSSSELVRHFHHHMDVYQCTKCDKTFA 219
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 138 TRCVKCN-KIITQGGVTYKNEPWHRECFTCTNCNTSL 245
T C+ C ++ + + +HR CF C+ CN+SL
Sbjct: 609 TACLICGERVYLMERLVAERRLFHRACFRCSRCNSSL 645
>SB_12157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +2
Query: 377 EDRHWHNDCFICAQCKTSLVGKGFI---TDGQDIICPECAKQK 496
E W CA+CK+ G+G + T + +C +C K+K
Sbjct: 126 EGYFWDTGTLYCAECKSCGRGRGVVRNCTHNHNTVCRKCEKEK 168
>SB_38302| Best HMM Match : DIL (HMM E-Value=1.3)
Length = 292
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 304 TVRQALHFLHQAHHRYRRHPLHLVRRQTLAQRLLHLRAVQDLARRQGLH--HRRTGHHLS 477
T+R+ L F H H R LHL+ + L + L R+GLH RTG HL
Sbjct: 63 TMRKRLTFTHGLHLLTVRKGLHLLTMRKGLHLLTVRTGLHLLTVRKGLHLLTVRTGLHLL 122
Query: 478 RVRQ 489
VR+
Sbjct: 123 TVRK 126
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 304 TVRQALHFLHQAHHRYRRHPLHLVRRQTLAQRLLHLRAVQDLARRQGLH--HRRTGHHLS 477
TV + LH L H LHL+ +T L + + L R+GLH RTG HL
Sbjct: 141 TVLKGLHLLTVRKRLTFTHGLHLLTVRTGLHLLTVRKGLHLLTVRKGLHLITVRTGLHLL 200
Query: 478 RVRQ 489
VR+
Sbjct: 201 TVRK 204
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 304 TVRQALHFLHQAHHRYRRHPLHLVRRQTLAQRLLHLRAVQDLARRQGLH--HRRTGHHLS 477
TVR+ LH L H LHL+ ++ LHL L R+GLH RTG HL
Sbjct: 54 TVRKGLHLLTMRKRLTFTHGLHLL----TVRKGLHL-----LTMRKGLHLLTVRTGLHLL 104
Query: 478 RVRQ 489
VR+
Sbjct: 105 TVRK 108
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 135 ATRCVKCNKIIT-QGGVTYKNEPWHRECFTCTNCNTSL 245
+ RC C K + V +N +H+ CF C CN L
Sbjct: 242 SNRCDSCGKSVDILERVAVENHVFHKACFVCAICNVWL 279
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 24 WHEKCFCCVVCKNPIG--TKSFIPREQEIYCAGCYED 128
+H+ CF C +C + F+P + YC Y+D
Sbjct: 265 FHKACFVCAICNVWLNHFNYCFVPDHDKFYCVQHYQD 301
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 263 SRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL 433
S+ +K A+ + RC SC K + + ++ E+ +H CF+CA C L
Sbjct: 226 SKRKKEKTADKKQSFESNRCDSCGKSVDIL---ERVAVENHVFHKACFVCAICNVWL 279
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 132 FATRCVKCNKIITQGGVTYK--NEPWHRECFTCTNC 233
F T+C C K I + + +H CF CT C
Sbjct: 3 FGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMC 38
>SB_14518| Best HMM Match : MIB_HERC2 (HMM E-Value=2.4e-38)
Length = 742
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 45 CVVCKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQ 173
C+VC F P + C GC +C++C + IT+
Sbjct: 625 CMVCSEKKSQLLFKPCNHMVACEGC--GSLMKKCIQCRENITE 665
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = +2
Query: 236 HVARRPGFTSRDEKPYCAECFGELFAKRCTSCTKPITG 349
H + +R + Y C G + C SCT TG
Sbjct: 1848 HACKNNATCNRRDSDYTCTCVGNFAGELCDSCTAGYTG 1885
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Frame = +3
Query: 18 RQWHEKCFCCVVCKNPIGTKSFIPREQEIYCAGCYED-------KFATRCVKCNKII 167
R HE CC +C P + +P YC+ C ++ K +C KC + +
Sbjct: 651 RSAHESS-CCPICSRPFKSPKILPC-LHTYCSDCVKEIVRSRLGKLTLQCPKCPRSV 705
>SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 54 CKNPIGTKSFIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRE-CFTCTN 230
C++ K F ++ Y + + RC C+K Q + +E H+E F C++
Sbjct: 459 CQHERCGKKFARKDLFEYHSRTHSGLKPYRCRLCDKYFAQRSLVRSHERTHQEKPFKCSD 518
Query: 231 CNTSLAGQGSLR 266
C S + SL+
Sbjct: 519 CKMSFRQRISLQ 530
>SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 401 CFICAQCKTSLVGKGFITDGQDIICPECAKQK 496
C +C QC T + +G++ CP CA K
Sbjct: 362 CDVCGQCGTHKICQGWVAMPDIWECPTCAAVK 393
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,960,196
Number of Sequences: 59808
Number of extensions: 428552
Number of successful extensions: 1533
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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