Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0287
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U23510-10|AAC46780.1|  979|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z50795-1|CAA90662.1|  502|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical
           protein T12A2.15a protein.
          Length = 713

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 748 VERSVNQNKENQPVLISDARPVFRMRFVFTLFHLDSE 638
           VE S+ +  +  PV +    P+F+ +F+F + HL+ +
Sbjct: 448 VEVSLGKETQRTPVKVKTVNPLFQSKFLFFVRHLEGQ 484


>U23510-10|AAC46780.1|  979|Caenorhabditis elegans Hypothetical
           protein R12C12.1a protein.
          Length = 979

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -2

Query: 261 RAPMYLAHPIFNTHAQCSQQL 199
           R+ ++L HP+FNTH Q  QQL
Sbjct: 492 RSSLFLQHPVFNTH-QSEQQL 511


>Z50795-1|CAA90662.1|  502|Caenorhabditis elegans Hypothetical
           protein R166.1 protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 536 ASNPPPASSGTPPVVAANFISNNFSG 459
           A+ PPP+S  T  V + N I  NFSG
Sbjct: 217 AAVPPPSSRATANVFSGNSIGLNFSG 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,028,999
Number of Sequences: 27780
Number of extensions: 383855
Number of successful extensions: 1123
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)