Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0286
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   4.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 582  GISRNCYGTTLAGDLARDGVWLSY 511
            G++   YG   AG+  R G +L+Y
Sbjct: 2579 GLNAKSYGPGEAGEFTRAGGFLAY 2602


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 300 MMRFLRSCLYRNKHVPDSAHVSRHL 374
           +  ++   L + K  PD A + RHL
Sbjct: 43  LKNYVNCLLEKGKCTPDGAELKRHL 67


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 322 HDLKNLIIQGRAEEEINDLE 263
           +D K+   QG+A+ EI DLE
Sbjct: 30  YDSKSHFRQGQAKFEITDLE 49


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 463 KDNSASNGSGDFLAALHTQTNMTVVVANGNK 371
           K NS +NGS D +      ++    + NG+K
Sbjct: 279 KPNSTTNGSPDVIKVEPELSDSEKTLCNGSK 309


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 603 IPVPRGAGISRNCYGTTLAGDL 538
           I V R A I+ N Y  TL GD+
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDI 738


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 603 IPVPRGAGISRNCYGTTLAGDL 538
           I V R A I+ N Y  TL GD+
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDI 738


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 603 IPVPRGAGISRNCYGTTLAGDL 538
           I V R A I+ N Y  TL GD+
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDI 738


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 603 IPVPRGAGISRNCYGTTLAGDL 538
           I V R A I+ N Y  TL GD+
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDI 738


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 544 TGKCGSVTIPADSCP 588
           TGK   VT+P   CP
Sbjct: 278 TGKASFVTVPMIVCP 292


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 544 TGKCGSVTIPADSCP 588
           TGK   VT+P   CP
Sbjct: 278 TGKASFVTVPMIVCP 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,189
Number of Sequences: 336
Number of extensions: 2877
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)