Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0283
(497 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 131 3e-31
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 131 3e-31
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 59 2e-09
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 39 0.002
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 39 0.002
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 37 0.007
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 36 0.022
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 35 0.029
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 35 0.029
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 35 0.029
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 33 0.15
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 33 0.15
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 33 0.15
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 33 0.15
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 33 0.15
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 33 0.15
AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical... 33 0.15
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 32 0.20
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 32 0.20
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 31 0.35
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.1
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 30 1.1
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 29 1.4
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 1.9
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 1.9
AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical ... 29 1.9
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 2.5
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 27 5.7
AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical ... 27 5.7
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr... 27 7.6
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 27 7.6
Z48055-8|CAA88133.2| 379|Caenorhabditis elegans Hypothetical pr... 27 10.0
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 27 10.0
AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium bind... 27 10.0
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 131 bits (316), Expect = 3e-31
Identities = 60/67 (89%), Positives = 66/67 (98%)
Frame = +2
Query: 53 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTR 232
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AG+TRFTDTR
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60
Query: 233 KDEQDRC 253
KDEQ+RC
Sbjct: 61 KDEQERC 67
Score = 88.2 bits (209), Expect = 3e-18
Identities = 53/88 (60%), Positives = 58/88 (65%), Gaps = 8/88 (9%)
Frame = +1
Query: 256 TIKSTAISMFFELEEKDLVFITNPDQRE------KSDK--GFLINLIASPGHVDFSSEVT 411
TIKSTAIS+FFELE+KDL F+ +Q E K +K GFLINLI SPGHVDFSSEVT
Sbjct: 69 TIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVT 128
Query: 412 AALRVTXXXXXXXXXXXXXXXQTETVLR 495
AALRVT QTETVLR
Sbjct: 129 AALRVTDGALVVVDCVSGVCVQTETVLR 156
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 131 bits (316), Expect = 3e-31
Identities = 60/67 (89%), Positives = 66/67 (98%)
Frame = +2
Query: 53 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTR 232
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AG+TRFTDTR
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60
Query: 233 KDEQDRC 253
KDEQ+RC
Sbjct: 61 KDEQERC 67
Score = 85.4 bits (202), Expect = 2e-17
Identities = 52/88 (59%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Frame = +1
Query: 256 TIKSTAISMFFELEEKDLVFITNPDQRE------KSDK--GFLINLIASPGHVDFSSEVT 411
TIKSTAIS+FFELE+KDL F+ +Q E K +K GFLINLI SPGHVDFSSEVT
Sbjct: 69 TIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVT 128
Query: 412 AALRVTXXXXXXXXXXXXXXXQTETVLR 495
AAL VT QTETVLR
Sbjct: 129 AALGVTDGALVVVDCVSGVCVQTETVLR 156
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 104 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDR 250
+IRN+ ++AHVDHGK++ DSLVS +I+ AG R+ D+R+DEQ R
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTR 67
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 358 LINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETVLR 495
LINLI SPGHVDFS EVT+AL ++ QTE ++R
Sbjct: 84 LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIR 129
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 104 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDR 250
+IRN+ ++AHVDHGK++ DSLVS +I+ AG R+ D+R+DEQ R
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTR 67
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 358 LINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETVLR 495
LINLI SPGHVDFS EVT+AL ++ QTE ++R
Sbjct: 84 LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIR 129
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 107 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDR 250
IRN ++AHVDHGKSTL D L+ G + G + D + E++R
Sbjct: 42 IRNFGIVAHVDHGKSTLADRLLEMCGAVP---PGQKQMLDKLQVERER 86
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +1
Query: 349 KGFLINLIASPGHVDFSSEVTAALRV 426
+G+L+NLI +PGHVDFS+EV+ +L V
Sbjct: 100 RGYLLNLIDTPGHVDFSAEVSRSLAV 125
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1
Query: 310 VFITNPDQREKSDKGFLINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETV 489
V I D R KS +L+N+I +PGHV+FS E+TA+ R+ TE
Sbjct: 189 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 245
Query: 490 LR 495
+R
Sbjct: 246 IR 247
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 86 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGDTRFTDTRKDEQDRCTPL 262
+MD +RN+++ H+ HGK+T D L+ + A D RFTD E+ R +
Sbjct: 125 LMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSI 184
Query: 263 NLRP 274
+P
Sbjct: 185 KSQP 188
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1
Query: 310 VFITNPDQREKSDKGFLINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETV 489
V I D R KS +L+N+I +PGHV+FS E+TA+ R+ TE
Sbjct: 64 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 120
Query: 490 LR 495
+R
Sbjct: 121 IR 122
Score = 35.5 bits (78), Expect = 0.022
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGDTRFTDTRKDEQDRCTPLN 265
MD +RN+++ H+ HGK+T D L+ + A D RFTD E+ R +
Sbjct: 1 MDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIK 60
Query: 266 LRP 274
+P
Sbjct: 61 SQP 63
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 37.1 bits (82), Expect = 0.007
Identities = 25/81 (30%), Positives = 35/81 (43%)
Frame = +1
Query: 253 HTIKSTAISMFFELEEKDLVFITNPDQREKSDKGFLINLIASPGHVDFSSEVTAALRVTX 432
H K ++ F ++E + + + + KG INLI +PGHVDF EV +RV
Sbjct: 57 HVDKGNTVTDFLDIERERGITVQSAAVN-LDWKGHRINLIDTPGHVDFRVEVERCVRVLD 115
Query: 433 XXXXXXXXXXXXXXQTETVLR 495
QT TV R
Sbjct: 116 GIVVVIDGSAGVQPQTLTVWR 136
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 107 IRNMSVIAHVDHGKSTLTDSLVSKAGII--AGARAGDTRFTDTRKDEQDR 250
+RN+ VIAHVD GK+T+T+ L+ AG I AG TD E++R
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERER 74
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +1
Query: 352 GFLINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETVLR 495
G IN+I +PGHVDF+ EV ALRV QT TV R
Sbjct: 111 GTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNR 158
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 107 IRNMSVIAHVDHGKSTLTDSLVSKAGII 190
IRN+ + AH+D GK+T+T+ ++ AG I
Sbjct: 44 IRNIGISAHIDSGKTTVTERILYYAGRI 71
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLN 265
N+ I HVDHGK+TLT ++ GA+ D +E+ R +N
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 101
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLN 265
N+ I HVDHGK+TLT ++ GA+ D +E+ R +N
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLN 265
N+ I HVDHGK+TLT ++ GA+ D +E+ R +N
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +2
Query: 119 SVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLNLRPSLCSSSLK 298
+++ D GK+TL ++L S AG G A +F TR+ C+ +N R SS
Sbjct: 51 AIVGVADSGKTTLLEALTSGAGGDIGGIAMLDKFMLTRRRFNKFCSHINYRNQYPSSLSV 110
Query: 299 RKI*Y 313
R + Y
Sbjct: 111 RSLLY 115
>AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical
protein Y73F8A.1 protein.
Length = 716
Score = 32.7 bits (71), Expect = 0.15
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +2
Query: 38 HKPSKMVNFTVDEIRGMMDKKRN-IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDT 214
H P K+ DE+ M ++KRN + N A+++ + +S+ S I G A
Sbjct: 610 HVPEKVAEDIADEVARMTEQKRNYMENHRDYANLNRRVDQMQESVFSIVDRIEGVNATLQ 669
Query: 215 RFTDTRKDEQDRCTPLNLRPSLCSSSLKRKI*YSSQTLTSV 337
R +QD ++L L + R+ T+TS+
Sbjct: 670 TIEKQRVQQQDGGNLMDLSALLTNQVRNRESAARRPTITSI 710
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLNLRPSLCSSS 292
N+ I H+DHGK+TLT ++ A+ D K+E+ R +N+ S
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 293 LKR 301
L+R
Sbjct: 107 LRR 109
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLNLRPSLCSSS 292
N+ I H+DHGK+TLT ++ A+ D K+E+ R +N+ S
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 293 LKR 301
L+R
Sbjct: 107 LRR 109
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 92 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTR 217
D +R ++++ HVDHGK+TL D++ + I AG G T+
Sbjct: 151 DLERRPPIVTIMGHVDHGKTTLLDAM-RNSQIAAGEFGGITQ 191
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 491 STVSVCTHTPDTQSTTTRDPSVTRS-AAVTSEEKSTCPGEAIKLIKKP 351
+T + T T T +TTT P+ T + A TSE +T P + KP
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKP 269
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = -1
Query: 491 STVSVCTHTPDTQSTTTRDPSVTRSAAVTSEEKSTCPGEAIKLIKKPLSLFSRWSGFVMN 312
++ + T +T STT+ P +T + + +E T ++ P L RW V
Sbjct: 697 ASTGIITTDEETTSTTSTTPEITSTKEIVTESAITQTSVSVVESSTPRQLPERWKAIVNK 756
Query: 311 TK 306
K
Sbjct: 757 FK 758
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 491 STVSVCTHTPDTQSTTTRDPSVTRSAAVTSEEKSTCPGEAIKLIKK 354
ST + + P ++TTT + T + VT K P E KL+KK
Sbjct: 763 STTAAPSTKPAEETTTTTEAPSTTTKPVTVAVKKVSPEEMEKLVKK 808
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 140 DRRGRSQTCCGYSASCPSSHG 78
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 140 DRRGRSQTCCGYSASCPSSHG 78
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical
protein F43E2.3 protein.
Length = 631
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 461 DTQSTTTRDPSVTRSAAVTSEEKSTCPGEAIK 366
D+ +T R P TRS ++TS + C G+ I+
Sbjct: 174 DSANTILRSPYSTRSDSITSVDSGQCSGDQIE 205
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 55 GEFHGRRDPWDDGQEAEYPQHVCDR 129
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 55 GEFHGRRDPWDDGQEAEYPQHVCDR 129
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLNLRPSLCSSS 292
N+ ++ HVD GK+TLT + + A D T T D R T L+L S +S
Sbjct: 15 NLGILGHVDSGKTTLTRRIAE----LGSTSAFDAHATSTTTDGIRRNT-LDLGFSTMTSL 69
Query: 293 LKRKI 307
R++
Sbjct: 70 SGRRL 74
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLNLRPSLCSSS 292
N+ ++ HVD GK+TLT + + A D T T D R T L+L S +S
Sbjct: 15 NLGILGHVDSGKTTLTRRIAE----LGSTSAFDAHATSTTTDGIRRNT-LDLGFSTMTSL 69
Query: 293 LKRKI 307
R++
Sbjct: 70 SGRRL 74
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 494 RSTVSVCTHTPDTQSTTTRDPSVTRSAAVTSEEKST 387
++T + T T T +TTT P+ + A + +KST
Sbjct: 163 KTTTTTTTSTTSTSTTTTEKPTTATTTARVTPKKST 198
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 101 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDR 250
+++ N+ V+ HVD GKSTL L+ ++ D+R D K E R
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVV------DSRTIDKFKHEAAR 211
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 101 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDR 250
+++ N+ V+ HVD GKSTL L+ ++ D+R D K E R
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVV------DSRTIDKFKHEAAR 229
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 483 FSLYTHTRHTVNNYKGSISDTECS 412
F L +T+ TV+ KG+ SDTEC+
Sbjct: 371 FPLCDYTQCTVDVQKGNYSDTECA 394
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 483 FSLYTHTRHTVNNYKGSISDTECS 412
F L +T+ TV+ KG+ SDTEC+
Sbjct: 371 FPLCDYTQCTVDVQKGNYSDTECA 394
>AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical
protein C47F8.8 protein.
Length = 347
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 468 HTRHTVNNYKGSISDTECSCYFRREINV 385
H T + G IS T C+ +FRR I +
Sbjct: 15 HNTETTRRHFGIISCTACAAFFRRSIGM 42
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGII 190
NM + HVD GKST+ L+ G++
Sbjct: 111 NMVFVGHVDAGKSTIGGQLMFLTGMV 136
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 27.1 bits (57), Expect = 7.6
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -1
Query: 464 PDTQSTTTRDPSVTRSAAVTSEEKSTCPGEAIKLIKKPLSLFSRWSGFVMNTKSFSSSSK 285
P TQSTTT + T + ++ S K C +K S F+R S K SS ++
Sbjct: 413 PSTQSTTTMKSTTTATTSM-STTKKVCAKSDLKCANGWTS-FNRTSTNPFCFKVISSYNQ 470
Query: 284 NIEMAVDLMVCNG 246
+ E + L +G
Sbjct: 471 SYEQSEALCAASG 483
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 27.1 bits (57), Expect = 7.6
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Frame = -1
Query: 476 CTHTPDTQSTTTRDPSVTRSAAVTSEE----KSTCPGEAIKLIKKPLSLF----SRWSGF 321
C T +TTT + T S+ + EE K + IK +KK +F +R
Sbjct: 132 CHEATTTTTTTTTSTTTTDSSLIVDEEEEAQKDALNSDVIKPVKKKEDVFCSATNRRGVN 191
Query: 320 VMNTKSFSSSS 288
NTKS ++SS
Sbjct: 192 WQNTKSGTTSS 202
>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
protein ZC84.6 protein.
Length = 1474
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 155 GLTCRDRRGRSQTCCGYSASCPSSH 81
G RD G Q+C CPSSH
Sbjct: 607 GSPLRDSNGALQSCSERDGGCPSSH 631
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 27.1 bits (57), Expect = 7.6
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Frame = -1
Query: 476 CTHTPDTQSTTTRDPSVTRSAAVTSEE----KSTCPGEAIKLIKKPLSLF----SRWSGF 321
C T +TTT + T S+ + EE K + IK +KK +F +R
Sbjct: 132 CHEATTTTTTTTTSTTTTDSSLIVDEEEEAQKDALNSDVIKPVKKKEDVFCSATNRRGVN 191
Query: 320 VMNTKSFSSSS 288
NTKS ++SS
Sbjct: 192 WQNTKSGTTSS 202
>Z48055-8|CAA88133.2| 379|Caenorhabditis elegans Hypothetical
protein T07A5.1 protein.
Length = 379
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 274 ISMFFELEEKDLVFITNPDQREKSDKGFLINL 369
I +FFE EEK V + + D +EK+ K L NL
Sbjct: 23 IKIFFE-EEKFDVLVVSLDSKEKTSKECLSNL 53
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 26.6 bits (56), Expect = 10.0
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -1
Query: 467 TPDTQSTTTRDPSVTRSAAVTSEEKSTCP-GEAIKLIKKPLSLFSRWSGFVMNTKSFSSS 291
TPD ++TTT P+ T++ + +E+ + G ++ P S+ S SG N+ + ++S
Sbjct: 157 TPDPKATTTPTPTTTKAQNIIAEDPNGGQLGGGELVVTNPGSVGS-GSGNSGNSSNNNNS 215
Query: 290 SKN 282
S N
Sbjct: 216 SGN 218
>AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform d protein.
Length = 679
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 491 STVSVCTHTPDTQSTTTRDPSVTRSAAVTSEEKSTCP 381
+TV T TP T+S TT+ VT + T+ ++ P
Sbjct: 562 TTVIQTTETPSTKSKTTKKVKVTTTTVSTTTITTSTP 598
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,530,026
Number of Sequences: 27780
Number of extensions: 236259
Number of successful extensions: 858
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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