Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0283
(497 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 100 5e-22
At5g13650.2 68418.m01585 elongation factor family protein contai... 54 4e-08
At5g13650.1 68418.m01584 elongation factor family protein contai... 52 2e-07
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 50 7e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 48 4e-06
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 44 4e-05
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 44 6e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 44 8e-05
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 43 1e-04
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 43 1e-04
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 40 0.001
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 36 0.015
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 36 0.015
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 32 0.19
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 32 0.19
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 32 0.19
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 32 0.19
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 30 0.75
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 1.00
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 30 1.00
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 30 1.00
At5g23160.1 68418.m02708 expressed protein ; expression supporte... 29 1.3
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 1.7
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 2.3
At2g03260.1 68415.m00279 EXS family protein / ERD1/XPR1/SYG1 fam... 29 2.3
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 28 3.0
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 28 3.0
At4g05632.1 68417.m00875 hypothetical protein 27 7.0
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 27 7.0
At3g24390.1 68416.m03063 Ulp1 protease family protein contains P... 27 9.3
At2g19170.1 68415.m02237 subtilase family protein contains simil... 27 9.3
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 100 bits (240), Expect = 5e-22
Identities = 49/66 (74%), Positives = 53/66 (80%)
Frame = +2
Query: 53 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTR 232
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AGD R TDTR
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 233 KDEQDR 250
DE +R
Sbjct: 61 ADEAER 66
Score = 69.7 bits (163), Expect = 1e-12
Identities = 39/80 (48%), Positives = 48/80 (60%)
Frame = +1
Query: 256 TIKSTAISMFFELEEKDLVFITNPDQREKSDKGFLINLIASPGHVDFSSEVTAALRVTXX 435
TIKST IS+++E+ ++ L T + +LINLI SPGHVDFSSEVTAALR+T
Sbjct: 69 TIKSTGISLYYEMTDESLKSFTGA----RDGNEYLINLIDSPGHVDFSSEVTAALRITDG 124
Query: 436 XXXXXXXXXXXXXQTETVLR 495
QTETVLR
Sbjct: 125 ALVVVDCIEGVCVQTETVLR 144
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 54.4 bits (125), Expect = 4e-08
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +2
Query: 44 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFT 223
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A + + R
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121
Query: 224 DTRKDEQDR-CTPLNLRPSLCSSSLKRKI 307
D+ E++R T L+ S+ + K I
Sbjct: 122 DSNDLERERGITILSKNTSITYKNTKVNI 150
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 349 KGFLINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETVLR 495
K +N+I +PGH DF EV L + QT VL+
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLK 192
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDR-CTPLN 265
+D++ N+RN++++AHVDHGK+TL DS++ +A + + R D+ E++R T L+
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 135
Query: 266 LRPSLCSSSLKRKI 307
S+ + K I
Sbjct: 136 KNTSITYKNTKVNI 149
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 349 KGFLINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETVLR 495
K +N+I +PGH DF EV L + QT VL+
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLK 191
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 50.4 bits (115), Expect = 7e-07
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 101 RNIRNMSVIAHVDHGKSTLTDSLV--SKAGIIAGARAGDTRFTDTRKDEQDRCTPLNLRP 274
R +RN+ ++AHVDHGK+TL D L+ S G++ AG RF D +EQ R + ++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRA--ITMKS 64
Query: 275 SLCSSSLKRK 304
S S SLK K
Sbjct: 65 S--SISLKYK 72
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +1
Query: 349 KGFLINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETVLR 495
K + +NLI SPGH+DF SEV+ A R++ QT VLR
Sbjct: 72 KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR 120
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2
Query: 104 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLNLR 271
NIRN S+IAH+DHGKSTL D L+ G + R +F D E++R + L+
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQ 139
Score = 34.7 bits (76), Expect = 0.035
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 346 DKGFLINLIASPGHVDFSSEVTAAL 420
D F +NLI +PGHVDFS EV+ +L
Sbjct: 149 DTPFCLNLIDTPGHVDFSYEVSRSL 173
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 44.4 bits (100), Expect = 4e-05
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +2
Query: 83 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGD---TRFTDTRKDEQDR 250
G+M +RN++++ H+ HGK+ D LV + ++ A + R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQER 174
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +2
Query: 59 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKD 238
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A D +
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122
Query: 239 EQDRCTPLN 265
E+ R +N
Sbjct: 123 ERARGITIN 131
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 43.6 bits (98), Expect = 8e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 107 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQ 244
IRN S+IAH+DHGKSTL D L+ G I G ++ D + E+
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLDKLQRER 110
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +1
Query: 256 TIKSTAISMFFELEEKDLVFITNPDQREKSDKGFLINLIASPGHVDFSSEVTAAL 420
T+K+ +MF+E + +D +E S G+L+NLI +PGHVDFS EV+ +L
Sbjct: 113 TVKAQTATMFYENKVED---------QEAS--GYLLNLIDTPGHVDFSYEVSRSL 156
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +2
Query: 83 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGD---TRFTDTRKDEQDR 250
G+M +RN++++ H+ HGK+ D LV + ++ A + ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQER 188
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 337 EKSDKGFLINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETVLR 495
+ K +L N++ +PGHV+FS E+TA+LR+ TE +R
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIR 255
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +2
Query: 83 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGD---TRFTDTRKDEQDR 250
G+M +RN++++ H+ HGK+ D LV + ++ A + ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQER 188
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 337 EKSDKGFLINLIASPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETVLR 495
+ K +L N++ +PGHV+FS E+TA+LR+ TE +R
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIR 255
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/78 (35%), Positives = 38/78 (48%)
Frame = +1
Query: 262 KSTAISMFFELEEKDLVFITNPDQREKSDKGFLINLIASPGHVDFSSEVTAALRVTXXXX 441
+ TA + E E++ + IT+ DK IN+I +PGHVDF+ EV ALRV
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVLDGAI 189
Query: 442 XXXXXXXXXXXQTETVLR 495
Q+ETV R
Sbjct: 190 CLFDSVAGVEPQSETVWR 207
Score = 30.3 bits (65), Expect = 0.75
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 101 RNIRNMSVIAHVDHGKSTLTDSLVSKAG--IIAGARAGDTRFTDTRKDEQDR 250
++ RN+ ++AH+D GK+T T+ ++ G G T D + EQ+R
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQER 145
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 35.9 bits (79), Expect = 0.015
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 349 KGFLINLIASPGHVDFSSEVTAALRV 426
K + +N+I +PGHVDF+ EV ALRV
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRV 156
Score = 31.5 bits (68), Expect = 0.33
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 190
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 35.9 bits (79), Expect = 0.015
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 349 KGFLINLIASPGHVDFSSEVTAALRV 426
K + +N+I +PGHVDF+ EV ALRV
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRV 156
Score = 31.5 bits (68), Expect = 0.33
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 190
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.19
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 30.3 bits (65), Expect = 0.75
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 116 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGDTR 217
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 1.00
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 126 SPTSITASQPSRTRWFPRPVSLLVRE 203
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 29.9 bits (64), Expect = 1.00
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIA 193
N++++ HVD GKSTL+ L+ G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 29.9 bits (64), Expect = 1.00
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSL 169
N+ I HVDHGK+TLT ++
Sbjct: 69 NVGTIGHVDHGKTTLTAAI 87
>At5g23160.1 68418.m02708 expressed protein ; expression supported
by MPSS
Length = 271
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 156 SRTRWFPRPVSLLVREPETPVSLTRVRTNK 245
+RTRWF RP +E TP S+ + K
Sbjct: 49 TRTRWFSRPTKFRSKEEITPTSIYKSEKQK 78
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 126 SPTSITASQPSRTRWFPRPVSLLVRE 203
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 116 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 208
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At2g03260.1 68415.m00279 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 807
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +2
Query: 137 DHG--KSTLTDSLVSKAGIIAGARAGDTRFTDTRKDEQDRCTPLNLRPSLCSSSLKRKI* 310
DHG + D S + GAR D K + TP + + +SS + +I
Sbjct: 230 DHGSVRGATGDVKTSSLNTMRGARPAPIEVLDHIKINNTKATPRSTIKGVLNSSSQNEII 289
Query: 311 YSSQTLTSVKRVIK 352
++ Q L V+ +K
Sbjct: 290 FNRQNLNEVEEKLK 303
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 488 TVSVCTHTPDTQSTTTRDPSVTRSAAVTSEEKS 390
T S T PD ST T PSVT+ + + EK+
Sbjct: 383 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 488 TVSVCTHTPDTQSTTTRDPSVTRSAAVTSEEKS 390
T S T PD ST T PSVT+ + + EK+
Sbjct: 644 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At4g05632.1 68417.m00875 hypothetical protein
Length = 197
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 216 VSLTRVRTNKTVAHH*IYGHLYVLR-A*RERFSIHHK 323
VSL+R + + HH +Y HL LR + E SIH +
Sbjct: 62 VSLSRTKQGSALEHHKLYMHLTKLRQSVLEASSIHDR 98
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 92 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
+KKR++ N+ I HVD GKST+ ++ +G
Sbjct: 97 NKKRHL-NVVFIGHVDAGKSTIGGQILFLSG 126
>At3g24390.1 68416.m03063 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At4g05280,
At1g25886, At4g03300
Length = 1139
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 241 TRPLHTIKSTAISMFFELEEKDLVFITNPDQREKSDKGFLINLIASPGHVDFSS 402
TR H + + A+S+ +E+DL PD ++ +GF+ + DF++
Sbjct: 548 TRVSHDVDTPALSVGCNSKEEDLDVPGEPDSNKEDMQGFIDEHDGANNESDFTA 601
>At2g19170.1 68415.m02237 subtilase family protein contains
similarity to meiotic serine proteinase TMP GI:6468325
from [Lycopersicon esculentum]
Length = 815
Score = 26.6 bits (56), Expect = 9.3
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
Frame = -1
Query: 449 TTTRDPSVTRSAAVTSEEKSTCPGEAIKLIKKPLSLFSRWSGFVMNTKSFSSSSK-NIEM 273
T+ P + AA+ ++ AIK S +G ++ + +S + +
Sbjct: 595 TSMAAPHIAGIAALVKQKHPQWSPAAIKSALMTTSTVIDRAGRLLQAQQYSDTEAVTLVK 654
Query: 272 AVDLMVCNGLVRPYACQ*NGCLRLSHQQ*YRPWKPTSP*GLTCRDRRGRSQTCCGYSASC 93
A +G V P A G + + + Y + T+P G++ + R + T C Y
Sbjct: 655 ATPFDYGSGHVNPSAALDPGLIFDAGYEDYLGFLCTTP-GISAHEIRNYTNTACNYDMKH 713
Query: 92 PSS 84
PS+
Sbjct: 714 PSN 716
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,924,622
Number of Sequences: 28952
Number of extensions: 222070
Number of successful extensions: 716
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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