Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0280
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +3

Query: 18  APRKCPANARPKTAGSKTFESRSPKPAFVAAPXSTVF 128
           AP++C  +  P     K +     KP   A    TVF
Sbjct: 474 APKECKQDFMPHELCDKYYRCVHGKPTEFACRPGTVF 510


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 343 ILIIETIYNVIIVLFLTLISVLMSEFIAFVIRLYKVLVFY 462
           +LI +TI+ + +++    I+ L   +I  V  +Y   VFY
Sbjct: 609 LLITQTIFIICVIVQSEQIAWLHLLYIFLVGIMYAADVFY 648



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 258 VYVTFHCIKMFCLILRXXRF 317
           V+VT + +  +C +LR  RF
Sbjct: 497 VFVTTYLMFDYCTVLRVQRF 516


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 148 RSRWQVSHRHPNPCSRPGRS 207
           R R  V+  H N  SRPG S
Sbjct: 369 REREPVADHHANLYSRPGDS 388


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,640
Number of Sequences: 336
Number of extensions: 3254
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)