Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0278
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109082-1|AAI09083.1|   70|Homo sapiens Unknown (protein for MG...    31   6.0  
BC109081-1|AAI09082.1|   70|Homo sapiens microRNA host gene (non...    31   6.0  
AB176708-1|BAD18387.1|   70|Homo sapiens C13orf25 v_2 protein.         31   6.0  

>BC109082-1|AAI09083.1|   70|Homo sapiens Unknown (protein for
           MGC:126270) protein.
          Length = 70

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -1

Query: 496 FCHSSYTLQCKRKIYMQKKIPRLHISRSVVSLTLSTGTLFFYCLCRQTNIRPA 338
           FCH    +  KR  Y   K+P L++ + V+    S   LFF+ +C+    RPA
Sbjct: 2   FCHVDVKISSKR--YTWTKLP-LNVPKLVLIYLQSHFVLFFFSMCQSIWERPA 51


>BC109081-1|AAI09082.1|   70|Homo sapiens microRNA host gene
           (non-protein coding) 1 protein.
          Length = 70

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -1

Query: 496 FCHSSYTLQCKRKIYMQKKIPRLHISRSVVSLTLSTGTLFFYCLCRQTNIRPA 338
           FCH    +  KR  Y   K+P L++ + V+    S   LFF+ +C+    RPA
Sbjct: 2   FCHVDVKISSKR--YTWTKLP-LNVPKLVLIYLQSHFVLFFFSMCQSIWERPA 51


>AB176708-1|BAD18387.1|   70|Homo sapiens C13orf25 v_2 protein.
          Length = 70

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -1

Query: 496 FCHSSYTLQCKRKIYMQKKIPRLHISRSVVSLTLSTGTLFFYCLCRQTNIRPA 338
           FCH    +  KR  Y   K+P L++ + V+    S   LFF+ +C+    RPA
Sbjct: 2   FCHVDVKISSKR--YTWTKLP-LNVPKLVLIYLQSHFVLFFFSMCQSIWERPA 51


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,409,263
Number of Sequences: 237096
Number of extensions: 1983388
Number of successful extensions: 2860
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2860
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)