Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0277
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S... 126 3e-30
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 34 0.019
SPBC16E9.19 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 0.73
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 27 3.0
SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr 1... 26 5.2
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 26 6.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.8
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 6.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.0
>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
Paa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 126 bits (304), Expect = 3e-30
Identities = 73/168 (43%), Positives = 103/168 (61%), Gaps = 27/168 (16%)
Frame = +3
Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434
LLPAIV LAED +WRVRLAII+++PLLA QLG EFF+EK+ +LCMSWL DHVY+IREAA
Sbjct: 402 LLPAIVTLAEDKQWRVRLAIIDYIPLLAQQLGVEFFNEKMGNLCMSWLEDHVYSIREAAI 461
Query: 435 LNLKKLVEQYGPQW---VLVLH*RAVR--------------------RCGKDITTRVLLP 545
NL+KL E +G +W ++ A+R ++ + +LP
Sbjct: 462 KNLRKLTEIFGLEWATETIIPKFLAMRSHPNYLYRMTTIFAISEIAPALNAEVIEKQILP 521
Query: 546 TVLSMADDNVANVRFNVAKTLQIMAKYL----DPAVIQPQVKPVLEKL 677
T+ + +D + N+RFNVAK +++ L D V + Q+ P+LE+L
Sbjct: 522 TLEQLVNDPIPNIRFNVAKAFEVLKPVLAAGGDSTVYEQQIIPLLEQL 569
Score = 89.4 bits (212), Expect = 5e-19
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = +1
Query: 1 EHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECP 180
+ I++ I+P I++L+ D QHV++AL I L+P +G++ T E+LLP+FL LKDE P
Sbjct: 317 KRIVLEEIIPVIQELINDPAQHVRAALGMNIGALAPQLGKEKTTEYLLPMFLELLKDENP 376
Query: 181 EVRLNIISNLECVNEVIGIQQL 246
EVRLNIIS LE VN+V+GI+ L
Sbjct: 377 EVRLNIISKLEVVNKVVGIELL 398
Score = 39.9 bits (89), Expect = 4e-04
Identities = 34/141 (24%), Positives = 57/141 (40%)
Frame = +3
Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434
L+ V L +DT+ VR AI +P L + E++ + + D +R A
Sbjct: 285 LIKPFVLLMKDTEQEVRRAIATQIPGFCELLDKRIVLEEIIPVIQELINDPAQHVRAALG 344
Query: 435 LNLKKLVEQYGPQWVLVLH*RAVRRCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQI 614
+N+ L Q G K+ TT LLP L + D VR N+ L++
Sbjct: 345 MNIGALAPQLG----------------KEKTTEYLLPMFLELLKDENPEVRLNIISKLEV 388
Query: 615 MAKYLDPAVIQPQVKPVLEKL 677
+ K + ++ + P + L
Sbjct: 389 VNKVVGIELLSQSLLPAIVTL 409
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/73 (27%), Positives = 40/73 (54%)
Frame = +1
Query: 22 ILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNII 201
+LP +L+ D N V+ + S + ++ +VG + + LLP +T +D+ VRL II
Sbjct: 363 LLPMFLELLKDENPEVRLNIISKLEVVNKVVGIELLSQSLLPAIVTLAEDKQWRVRLAII 422
Query: 202 SNLECVNEVIGIQ 240
+ + + +G++
Sbjct: 423 DYIPLLAQQLGVE 435
Score = 36.3 bits (80), Expect = 0.005
Identities = 36/141 (25%), Positives = 63/141 (44%)
Frame = +3
Query: 207 PRVCE*SDRHPTAGAVLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLC 386
P CE D+ ++ P I EL D VR A+ ++ LA QLG+E E L +
Sbjct: 309 PGFCELLDKRIVLEEII-PVIQELINDPAQHVRAALGMNIGALAPQLGKEKTTEYLLPMF 367
Query: 387 MSWLVDHVYAIREAATLNLKKLVEQYGPQWVLVLH*RAVRRCGKDITTRVLLPTVLSMAD 566
+ L D +R LN+ +E + G ++ ++ LLP ++++A+
Sbjct: 368 LELLKDENPEVR----LNIISKLEVVN------------KVVGIELLSQSLLPAIVTLAE 411
Query: 567 DNVANVRFNVAKTLQIMAKYL 629
D VR + + ++A+ L
Sbjct: 412 DKQWRVRLAIIDYIPLLAQQL 432
Score = 31.9 bits (69), Expect = 0.10
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 255 LLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAAT 434
LLP +EL +D VRL II + ++ +G E + L ++ D + +R A
Sbjct: 363 LLPMFLELLKDENPEVRLNIISKLEVVNKVVGIELLSQSLLPAIVTLAEDKQWRVRLAII 422
Query: 435 LNLKKLVEQYGPQW 476
+ L +Q G ++
Sbjct: 423 DYIPLLAQQLGVEF 436
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +1
Query: 22 ILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNII 201
+L ++ V D++ + +A+ + L+ +VG + L+ F+ +KD EVR I
Sbjct: 246 LLQPLRSFVSDSSWRTRYMVAANFVKLAKVVGPSLIKDELIKPFVLLMKDTEQEVRRAIA 305
Query: 202 SNL 210
+ +
Sbjct: 306 TQI 308
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 34.3 bits (75), Expect = 0.019
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +1
Query: 19 MILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNI 198
+IL + + D + ++ A I GLS +G ++ E++LPL L L D P V ++
Sbjct: 631 LILSHLITYLNDTDWMLRCAFFESITGLSIFIGPRSVDEYILPLMLQALVDPEPAVLESV 690
Query: 199 ISNLECVNEVIGIQQLV 249
+ + + E+ ++LV
Sbjct: 691 LGSFSGLIELHLFEKLV 707
Score = 33.1 bits (72), Expect = 0.045
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 252 VLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAA 431
++L ++ DT W +R A E + L+ +G DE + L + LVD A+ E+
Sbjct: 631 LILSHLITYLNDTDWMLRCAFFESITGLSIFIGPRSVDEYILPLMLQALVDPEPAVLESV 690
Query: 432 TLNLKKLVE 458
+ L+E
Sbjct: 691 LGSFSGLIE 699
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +1
Query: 19 MILPQIKDLVCDAN-QHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLN 195
++LP + + N + K S++ LS + ++ ++ +LP +T L+D+ +VR++
Sbjct: 431 VLLPIVLSTIRHVNTRESKINALSLVQILSRNICDESKLDTVLPFVMTLLRDQYADVRIS 490
Query: 196 -IISNLECVNEVIGI 237
+I+ V+ V I
Sbjct: 491 ALITITRLVSNVTSI 505
>SPBC16E9.19 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 101
Score = 29.1 bits (62), Expect = 0.73
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 323 VLDDGQTDPPLGVLCQLHDGGEEDCTSCWMPITS 222
+ D T P +GV L GGE+D S W IT+
Sbjct: 14 ITGDMSTLPEIGVRTLLGGGGEDDIKSHWAQITA 47
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 27.1 bits (57), Expect = 3.0
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 22 ILPQIKDLVCDANQHVKSALASVIMGLS---PIVGRQNTIEHLLPLFLTQLKDECPEVRL 192
I P + D + D + + ASVI LS +G ++ + HLL + + +E P V
Sbjct: 1053 ITPLLADALMDRDAVHRQTAASVIKHLSLGCVGLGVEDAMIHLLNILWPNILEESPHVIN 1112
Query: 193 NIISNLECVNEVIGI 237
+ ++ + IG+
Sbjct: 1113 AVREGIDGIRNCIGV 1127
>SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 258 GGLHQLLDADHFIHTLEVGDYVESDFGTFILQLCEEQR 145
G H +L++DH HT + SD F+ E +
Sbjct: 82 GCFHSILNSDHEPHTASLSHICHSDSSVFLRAFSETNK 119
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/42 (21%), Positives = 19/42 (45%)
Frame = -3
Query: 143 RRCSIVFCLPTMGLRPMMTEASADLTCWLASHTKSLICGKIM 18
R S+++CLP+ +P+ + +H + C +M
Sbjct: 387 REASLLYCLPSTDFQPLFVSEKLSIQEVTYAHCVRIFCEHVM 428
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 254 PPPRHRGAGRGHQVEGPSGHHRAHASTGGTAGPG 355
PPP G G G HH H GG GPG
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGG--GPG 231
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 642 IQPQVKPVLEKLNVGPRRRRQVLR 713
++ QV+ +L +LNVGPR Q L+
Sbjct: 562 LKEQVESMLSQLNVGPRDPMQFLK 585
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 631 SKYLAIICSVL-ATLNRTLATLSSAIDNTVGSSTLVVMS 518
S Y A + ++ ++L+ T + SSAI +V SSTL+ S
Sbjct: 707 STYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITAS 745
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,152,218
Number of Sequences: 5004
Number of extensions: 65171
Number of successful extensions: 226
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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